Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1926:A1954
Extra
PDB:
ATOM 1 O3' G A1925 98.118 123.936 105.454 1.00 54.49 O
ATOM 2 P U A1926 97.460 122.545 105.005 1.00 54.48 P
ATOM 3 OP1 U A1926 96.159 122.852 104.382 1.00 54.25 O
ATOM 4 OP2 U A1926 97.501 121.694 106.213 1.00 54.62 O
ATOM 5 O5' U A1926 98.477 121.914 103.954 1.00 54.87 O
ATOM 6 C5' U A1926 98.008 121.098 102.875 1.00 55.26 C
ATOM 7 C4' U A1926 98.691 119.751 102.893 1.00 55.98 C
ATOM 8 O4' U A1926 100.041 119.847 102.390 1.00 55.48 O
ATOM 9 C3' U A1926 98.764 119.007 104.225 1.00 56.13 C
ATOM 10 O3' U A1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 11 C2' U A1926 100.220 119.172 104.636 1.00 55.74 C
ATOM 12 O2' U A1926 100.661 118.022 105.320 1.00 59.46 O
ATOM 13 C1' U A1926 100.914 119.199 103.281 1.00 55.12 C
ATOM 14 N1 U A1926 102.220 119.872 103.230 1.00 53.88 N
ATOM 15 C2 U A1926 103.278 119.189 102.633 1.00 54.06 C
ATOM 16 O2 U A1926 103.197 118.054 102.220 1.00 53.62 O
ATOM 17 N3 U A1926 104.449 119.892 102.547 1.00 54.21 N
ATOM 18 C4 U A1926 104.692 121.164 103.006 1.00 53.90 C
ATOM 19 O4 U A1926 105.844 121.613 102.953 1.00 53.26 O
ATOM 20 C5 U A1926 103.565 121.791 103.635 1.00 53.74 C
ATOM 21 C6 U A1926 102.399 121.137 103.726 1.00 53.37 C
ATOM 22 P A A1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 23 OP1 A A1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 24 OP2 A A1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 25 O5' A A1927 97.488 117.087 106.192 1.00 57.40 O
TER
ATOM 1 O3' A B1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 2 P U B1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 3 OP1 U B1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 4 OP2 U B1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 5 O5' U B1954 104.260 114.179 103.204 1.00 57.14 O
ATOM 6 C5' U B1954 105.023 114.461 102.047 1.00 55.20 C
ATOM 7 C4' U B1954 105.651 115.816 102.195 1.00 54.99 C
ATOM 8 O4' U B1954 106.180 115.961 103.531 1.00 55.09 O
ATOM 9 C3' U B1954 106.799 116.113 101.270 1.00 54.29 C
ATOM 10 O3' U B1954 106.305 116.613 100.061 1.00 54.02 O
ATOM 11 C2' U B1954 107.589 117.154 102.043 1.00 55.56 C
ATOM 12 O2' U B1954 107.132 118.471 101.854 1.00 57.32 O
ATOM 13 C1' U B1954 107.371 116.715 103.494 1.00 55.57 C
ATOM 14 N1 U B1954 108.464 115.848 103.964 1.00 57.02 N
ATOM 15 C2 U B1954 109.771 116.306 103.851 1.00 57.06 C
ATOM 16 O2 U B1954 110.050 117.409 103.442 1.00 56.04 O
ATOM 17 N3 U B1954 110.732 115.411 104.250 1.00 58.18 N
ATOM 18 C4 U B1954 110.526 114.143 104.761 1.00 59.15 C
ATOM 19 O4 U B1954 111.493 113.429 105.014 1.00 60.95 O
ATOM 20 C5 U B1954 109.157 113.760 104.880 1.00 59.21 C
ATOM 21 C6 U B1954 108.199 114.597 104.486 1.00 58.08 C
ATOM 22 P G B1955 106.827 115.985 98.698 1.00 55.51 P
ATOM 23 OP1 G B1955 106.075 116.603 97.599 1.00 55.98 O
ATOM 24 OP2 G B1955 106.791 114.505 98.885 1.00 57.24 O
ATOM 25 O5' G B1955 108.318 116.507 98.625 1.00 56.42 O
TER
ATOM 2 P U A1926 97.460 122.545 105.005 1.00 54.48 P
ATOM 3 OP1 U A1926 96.159 122.852 104.382 1.00 54.25 O
ATOM 4 OP2 U A1926 97.501 121.694 106.213 1.00 54.62 O
ATOM 5 O5' U A1926 98.477 121.914 103.954 1.00 54.87 O
ATOM 6 C5' U A1926 98.008 121.098 102.875 1.00 55.26 C
ATOM 7 C4' U A1926 98.691 119.751 102.893 1.00 55.98 C
ATOM 8 O4' U A1926 100.041 119.847 102.390 1.00 55.48 O
ATOM 9 C3' U A1926 98.764 119.007 104.225 1.00 56.13 C
ATOM 10 O3' U A1926 98.569 117.621 103.962 1.00 57.20 O
ATOM 11 C2' U A1926 100.220 119.172 104.636 1.00 55.74 C
ATOM 12 O2' U A1926 100.661 118.022 105.320 1.00 59.46 O
ATOM 13 C1' U A1926 100.914 119.199 103.281 1.00 55.12 C
ATOM 14 N1 U A1926 102.220 119.872 103.230 1.00 53.88 N
ATOM 15 C2 U A1926 103.278 119.189 102.633 1.00 54.06 C
ATOM 16 O2 U A1926 103.197 118.054 102.220 1.00 53.62 O
ATOM 17 N3 U A1926 104.449 119.892 102.547 1.00 54.21 N
ATOM 18 C4 U A1926 104.692 121.164 103.006 1.00 53.90 C
ATOM 19 O4 U A1926 105.844 121.613 102.953 1.00 53.26 O
ATOM 20 C5 U A1926 103.565 121.791 103.635 1.00 53.74 C
ATOM 21 C6 U A1926 102.399 121.137 103.726 1.00 53.37 C
ATOM 22 P A A1927 97.341 116.827 104.638 1.00 58.51 P
ATOM 23 OP1 A A1927 97.646 115.388 104.412 1.00 58.36 O
ATOM 24 OP2 A A1927 96.026 117.380 104.228 1.00 58.12 O
ATOM 25 O5' A A1927 97.488 117.087 106.192 1.00 57.40 O
TER
ATOM 1 O3' A B1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 2 P U B1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 3 OP1 U B1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 4 OP2 U B1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 5 O5' U B1954 104.260 114.179 103.204 1.00 57.14 O
ATOM 6 C5' U B1954 105.023 114.461 102.047 1.00 55.20 C
ATOM 7 C4' U B1954 105.651 115.816 102.195 1.00 54.99 C
ATOM 8 O4' U B1954 106.180 115.961 103.531 1.00 55.09 O
ATOM 9 C3' U B1954 106.799 116.113 101.270 1.00 54.29 C
ATOM 10 O3' U B1954 106.305 116.613 100.061 1.00 54.02 O
ATOM 11 C2' U B1954 107.589 117.154 102.043 1.00 55.56 C
ATOM 12 O2' U B1954 107.132 118.471 101.854 1.00 57.32 O
ATOM 13 C1' U B1954 107.371 116.715 103.494 1.00 55.57 C
ATOM 14 N1 U B1954 108.464 115.848 103.964 1.00 57.02 N
ATOM 15 C2 U B1954 109.771 116.306 103.851 1.00 57.06 C
ATOM 16 O2 U B1954 110.050 117.409 103.442 1.00 56.04 O
ATOM 17 N3 U B1954 110.732 115.411 104.250 1.00 58.18 N
ATOM 18 C4 U B1954 110.526 114.143 104.761 1.00 59.15 C
ATOM 19 O4 U B1954 111.493 113.429 105.014 1.00 60.95 O
ATOM 20 C5 U B1954 109.157 113.760 104.880 1.00 59.21 C
ATOM 21 C6 U B1954 108.199 114.597 104.486 1.00 58.08 C
ATOM 22 P G B1955 106.827 115.985 98.698 1.00 55.51 P
ATOM 23 OP1 G B1955 106.075 116.603 97.599 1.00 55.98 O
ATOM 24 OP2 G B1955 106.791 114.505 98.885 1.00 57.24 O
ATOM 25 O5' G B1955 108.318 116.507 98.625 1.00 56.42 O
TER
Atoms:
C4: (104.692,121.164,103.006)
N3: (104.449,119.892,102.547)
OP1: (96.159,122.852,104.382)
OP2: (97.501,121.694,106.213)
C2: (103.278,119.189,102.633)
C1': (100.914,119.199,103.281)
C3': (98.764,119.007,104.225)
O5': (98.477,121.914,103.954)
O4': (100.041,119.847,102.390)
C5': (98.008,121.098,102.875)
P: (97.460,122.545,105.005)
C4': (98.691,119.751,102.893)
C2': (100.220,119.172,104.636)
O2': (100.661,118.022,105.320)
N1: (102.220,119.872,103.230)
O4: (105.844,121.613,102.953)
O2: (103.197,118.054,102.220)
C6: (102.399,121.137,103.726)
C5: (103.565,121.791,103.635)
O3': (98.569,117.621,103.962)
N3: (104.449,119.892,102.547)
OP1: (96.159,122.852,104.382)
OP2: (97.501,121.694,106.213)
C2: (103.278,119.189,102.633)
C1': (100.914,119.199,103.281)
C3': (98.764,119.007,104.225)
O5': (98.477,121.914,103.954)
O4': (100.041,119.847,102.390)
C5': (98.008,121.098,102.875)
P: (97.460,122.545,105.005)
C4': (98.691,119.751,102.893)
C2': (100.220,119.172,104.636)
O2': (100.661,118.022,105.320)
N1: (102.220,119.872,103.230)
O4: (105.844,121.613,102.953)
O2: (103.197,118.054,102.220)
C6: (102.399,121.137,103.726)
C5: (103.565,121.791,103.635)
O3': (98.569,117.621,103.962)
C4: (110.526,114.143,104.761)
N3: (110.732,115.411,104.250)
OP1: (105.604,112.098,103.362)
OP2: (104.348,113.060,105.387)
C2: (109.771,116.306,103.851)
C1': (107.371,116.715,103.494)
C3': (106.799,116.113,101.270)
O5': (104.260,114.179,103.204)
O4': (106.180,115.961,103.531)
C5': (105.023,114.461,102.047)
P: (104.406,112.786,103.935)
C4': (105.651,115.816,102.195)
C2': (107.589,117.154,102.043)
O2': (107.132,118.471,101.854)
N1: (108.464,115.848,103.964)
O4: (111.493,113.429,105.014)
O2: (110.050,117.409,103.442)
C6: (108.199,114.597,104.486)
C5: (109.157,113.760,104.880)
O3': (106.305,116.613,100.061)
N3: (110.732,115.411,104.250)
OP1: (105.604,112.098,103.362)
OP2: (104.348,113.060,105.387)
C2: (109.771,116.306,103.851)
C1': (107.371,116.715,103.494)
C3': (106.799,116.113,101.270)
O5': (104.260,114.179,103.204)
O4': (106.180,115.961,103.531)
C5': (105.023,114.461,102.047)
P: (104.406,112.786,103.935)
C4': (105.651,115.816,102.195)
C2': (107.589,117.154,102.043)
O2': (107.132,118.471,101.854)
N1: (108.464,115.848,103.964)
O4: (111.493,113.429,105.014)
O2: (110.050,117.409,103.442)
C6: (108.199,114.597,104.486)
C5: (109.157,113.760,104.880)
O3': (106.305,116.613,100.061)
Image (generated by PyMOL):