Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A630:A631
Extra
PDB:
ATOM 1 O3' G A 629 40.207 125.444 64.707 1.00 32.01 O
ATOM 2 P G A 630 39.911 123.876 64.760 1.00 31.90 P
ATOM 3 OP1 G A 630 40.380 123.312 63.474 1.00 31.82 O
ATOM 4 OP2 G A 630 38.501 123.703 65.175 1.00 31.96 O
ATOM 5 O5' G A 630 40.936 123.336 65.851 1.00 33.16 O
ATOM 6 C5' G A 630 42.321 123.219 65.481 1.00 34.88 C
ATOM 7 C4' G A 630 43.168 122.737 66.624 1.00 35.36 C
ATOM 8 O4' G A 630 43.052 123.647 67.746 1.00 36.95 O
ATOM 9 C3' G A 630 42.829 121.380 67.199 1.00 34.56 C
ATOM 10 O3' G A 630 43.365 120.348 66.390 1.00 33.91 O
ATOM 11 C2' G A 630 43.471 121.484 68.574 1.00 34.96 C
ATOM 12 O2' G A 630 44.880 121.458 68.444 1.00 33.03 O
ATOM 13 C1' G A 630 43.073 122.915 68.964 1.00 35.57 C
ATOM 14 N9 G A 630 41.753 123.076 69.583 1.00 34.69 N
ATOM 15 C8 G A 630 40.611 123.478 68.947 1.00 34.05 C
ATOM 16 N7 G A 630 39.581 123.557 69.739 1.00 35.31 N
ATOM 17 C5 G A 630 40.062 123.176 70.976 1.00 35.73 C
ATOM 18 C6 G A 630 39.390 123.052 72.224 1.00 36.59 C
ATOM 19 O6 G A 630 38.195 123.233 72.473 1.00 38.30 O
ATOM 20 N1 G A 630 40.256 122.654 73.237 1.00 36.06 N
ATOM 21 C2 G A 630 41.589 122.386 73.070 1.00 36.48 C
ATOM 22 N2 G A 630 42.252 122.012 74.180 1.00 35.55 N
ATOM 23 N3 G A 630 42.225 122.478 71.901 1.00 36.61 N
ATOM 24 C4 G A 630 41.404 122.878 70.906 1.00 35.78 C
ATOM 25 P A A 631 42.374 119.426 65.518 1.00 32.95 P
ATOM 26 OP1 A A 631 42.533 119.780 64.082 1.00 32.72 O
ATOM 27 OP2 A A 631 41.033 119.489 66.133 1.00 33.56 O
ATOM 28 O5' A A 631 42.891 117.947 65.791 1.00 30.90 O
TER
ATOM 1 O3' G B 630 43.365 120.348 66.390 1.00 33.91 O
ATOM 2 P A B 631 42.374 119.426 65.518 1.00 32.95 P
ATOM 3 OP1 A B 631 42.533 119.780 64.082 1.00 32.72 O
ATOM 4 OP2 A B 631 41.033 119.489 66.133 1.00 33.56 O
ATOM 5 O5' A B 631 42.891 117.947 65.791 1.00 30.90 O
ATOM 6 C5' A B 631 44.065 117.407 65.157 1.00 30.27 C
ATOM 7 C4' A B 631 44.568 116.233 65.959 1.00 30.89 C
ATOM 8 O4' A B 631 45.174 116.735 67.167 1.00 31.69 O
ATOM 9 C3' A B 631 43.491 115.260 66.411 1.00 30.67 C
ATOM 10 O3' A B 631 43.335 114.248 65.424 1.00 30.25 O
ATOM 11 C2' A B 631 44.056 114.709 67.715 1.00 31.41 C
ATOM 12 O2' A B 631 44.978 113.660 67.512 1.00 32.80 O
ATOM 13 C1' A B 631 44.819 115.921 68.257 1.00 32.48 C
ATOM 14 N9 A B 631 44.087 116.753 69.203 1.00 33.71 N
ATOM 15 C8 A B 631 42.905 117.396 68.989 1.00 34.96 C
ATOM 16 N7 A B 631 42.477 118.071 70.025 1.00 36.71 N
ATOM 17 C5 A B 631 43.448 117.857 70.989 1.00 33.80 C
ATOM 18 C6 A B 631 43.576 118.305 72.302 1.00 32.97 C
ATOM 19 N6 A B 631 42.665 119.068 72.914 1.00 33.67 N
ATOM 20 N1 A B 631 44.675 117.936 72.981 1.00 33.42 N
ATOM 21 C2 A B 631 45.567 117.150 72.376 1.00 33.79 C
ATOM 22 N3 A B 631 45.550 116.650 71.148 1.00 35.63 N
ATOM 23 C4 A B 631 44.449 117.052 70.495 1.00 34.24 C
ATOM 24 P G B 632 41.888 113.654 65.088 1.00 29.76 P
ATOM 25 OP1 G B 632 41.113 114.691 64.371 1.00 27.45 O
ATOM 26 OP2 G B 632 41.358 113.073 66.334 1.00 27.09 O
ATOM 27 O5' G B 632 42.231 112.461 64.089 1.00 27.29 O
TER
ATOM 2 P G A 630 39.911 123.876 64.760 1.00 31.90 P
ATOM 3 OP1 G A 630 40.380 123.312 63.474 1.00 31.82 O
ATOM 4 OP2 G A 630 38.501 123.703 65.175 1.00 31.96 O
ATOM 5 O5' G A 630 40.936 123.336 65.851 1.00 33.16 O
ATOM 6 C5' G A 630 42.321 123.219 65.481 1.00 34.88 C
ATOM 7 C4' G A 630 43.168 122.737 66.624 1.00 35.36 C
ATOM 8 O4' G A 630 43.052 123.647 67.746 1.00 36.95 O
ATOM 9 C3' G A 630 42.829 121.380 67.199 1.00 34.56 C
ATOM 10 O3' G A 630 43.365 120.348 66.390 1.00 33.91 O
ATOM 11 C2' G A 630 43.471 121.484 68.574 1.00 34.96 C
ATOM 12 O2' G A 630 44.880 121.458 68.444 1.00 33.03 O
ATOM 13 C1' G A 630 43.073 122.915 68.964 1.00 35.57 C
ATOM 14 N9 G A 630 41.753 123.076 69.583 1.00 34.69 N
ATOM 15 C8 G A 630 40.611 123.478 68.947 1.00 34.05 C
ATOM 16 N7 G A 630 39.581 123.557 69.739 1.00 35.31 N
ATOM 17 C5 G A 630 40.062 123.176 70.976 1.00 35.73 C
ATOM 18 C6 G A 630 39.390 123.052 72.224 1.00 36.59 C
ATOM 19 O6 G A 630 38.195 123.233 72.473 1.00 38.30 O
ATOM 20 N1 G A 630 40.256 122.654 73.237 1.00 36.06 N
ATOM 21 C2 G A 630 41.589 122.386 73.070 1.00 36.48 C
ATOM 22 N2 G A 630 42.252 122.012 74.180 1.00 35.55 N
ATOM 23 N3 G A 630 42.225 122.478 71.901 1.00 36.61 N
ATOM 24 C4 G A 630 41.404 122.878 70.906 1.00 35.78 C
ATOM 25 P A A 631 42.374 119.426 65.518 1.00 32.95 P
ATOM 26 OP1 A A 631 42.533 119.780 64.082 1.00 32.72 O
ATOM 27 OP2 A A 631 41.033 119.489 66.133 1.00 33.56 O
ATOM 28 O5' A A 631 42.891 117.947 65.791 1.00 30.90 O
TER
ATOM 1 O3' G B 630 43.365 120.348 66.390 1.00 33.91 O
ATOM 2 P A B 631 42.374 119.426 65.518 1.00 32.95 P
ATOM 3 OP1 A B 631 42.533 119.780 64.082 1.00 32.72 O
ATOM 4 OP2 A B 631 41.033 119.489 66.133 1.00 33.56 O
ATOM 5 O5' A B 631 42.891 117.947 65.791 1.00 30.90 O
ATOM 6 C5' A B 631 44.065 117.407 65.157 1.00 30.27 C
ATOM 7 C4' A B 631 44.568 116.233 65.959 1.00 30.89 C
ATOM 8 O4' A B 631 45.174 116.735 67.167 1.00 31.69 O
ATOM 9 C3' A B 631 43.491 115.260 66.411 1.00 30.67 C
ATOM 10 O3' A B 631 43.335 114.248 65.424 1.00 30.25 O
ATOM 11 C2' A B 631 44.056 114.709 67.715 1.00 31.41 C
ATOM 12 O2' A B 631 44.978 113.660 67.512 1.00 32.80 O
ATOM 13 C1' A B 631 44.819 115.921 68.257 1.00 32.48 C
ATOM 14 N9 A B 631 44.087 116.753 69.203 1.00 33.71 N
ATOM 15 C8 A B 631 42.905 117.396 68.989 1.00 34.96 C
ATOM 16 N7 A B 631 42.477 118.071 70.025 1.00 36.71 N
ATOM 17 C5 A B 631 43.448 117.857 70.989 1.00 33.80 C
ATOM 18 C6 A B 631 43.576 118.305 72.302 1.00 32.97 C
ATOM 19 N6 A B 631 42.665 119.068 72.914 1.00 33.67 N
ATOM 20 N1 A B 631 44.675 117.936 72.981 1.00 33.42 N
ATOM 21 C2 A B 631 45.567 117.150 72.376 1.00 33.79 C
ATOM 22 N3 A B 631 45.550 116.650 71.148 1.00 35.63 N
ATOM 23 C4 A B 631 44.449 117.052 70.495 1.00 34.24 C
ATOM 24 P G B 632 41.888 113.654 65.088 1.00 29.76 P
ATOM 25 OP1 G B 632 41.113 114.691 64.371 1.00 27.45 O
ATOM 26 OP2 G B 632 41.358 113.073 66.334 1.00 27.09 O
ATOM 27 O5' G B 632 42.231 112.461 64.089 1.00 27.29 O
TER
Atoms:
OP1: (40.380,123.312,63.474)
OP2: (38.501,123.703,65.175)
C3': (42.829,121.380,67.199)
C1': (43.073,122.915,68.964)
C5': (42.321,123.219,65.481)
O6: (38.195,123.233,72.473)
O4': (43.052,123.647,67.746)
C8: (40.611,123.478,68.947)
C2: (41.589,122.386,73.070)
C6: (39.390,123.052,72.224)
C5: (40.062,123.176,70.976)
C4: (41.404,122.878,70.906)
P: (39.911,123.876,64.760)
C4': (43.168,122.737,66.624)
C2': (43.471,121.484,68.574)
O2': (44.880,121.458,68.444)
N1: (40.256,122.654,73.237)
N2: (42.252,122.012,74.180)
N3: (42.225,122.478,71.901)
N7: (39.581,123.557,69.739)
N9: (41.753,123.076,69.583)
O5': (40.936,123.336,65.851)
O3': (43.365,120.348,66.390)
OP2: (38.501,123.703,65.175)
C3': (42.829,121.380,67.199)
C1': (43.073,122.915,68.964)
C5': (42.321,123.219,65.481)
O6: (38.195,123.233,72.473)
O4': (43.052,123.647,67.746)
C8: (40.611,123.478,68.947)
C2: (41.589,122.386,73.070)
C6: (39.390,123.052,72.224)
C5: (40.062,123.176,70.976)
C4: (41.404,122.878,70.906)
P: (39.911,123.876,64.760)
C4': (43.168,122.737,66.624)
C2': (43.471,121.484,68.574)
O2': (44.880,121.458,68.444)
N1: (40.256,122.654,73.237)
N2: (42.252,122.012,74.180)
N3: (42.225,122.478,71.901)
N7: (39.581,123.557,69.739)
N9: (41.753,123.076,69.583)
O5': (40.936,123.336,65.851)
O3': (43.365,120.348,66.390)
OP1: (42.533,119.780,64.082)
OP2: (41.033,119.489,66.133)
C3': (43.491,115.260,66.411)
C1': (44.819,115.921,68.257)
C5': (44.065,117.407,65.157)
O4': (45.174,116.735,67.167)
C8: (42.905,117.396,68.989)
O2': (44.978,113.660,67.512)
C6: (43.576,118.305,72.302)
C5: (43.448,117.857,70.989)
C4: (44.449,117.052,70.495)
P: (42.374,119.426,65.518)
C4': (44.568,116.233,65.959)
C2': (44.056,114.709,67.715)
C2: (45.567,117.150,72.376)
N1: (44.675,117.936,72.981)
N3: (45.550,116.650,71.148)
N6: (42.665,119.068,72.914)
N7: (42.477,118.071,70.025)
N9: (44.087,116.753,69.203)
O5': (42.891,117.947,65.791)
O3': (43.335,114.248,65.424)
OP2: (41.033,119.489,66.133)
C3': (43.491,115.260,66.411)
C1': (44.819,115.921,68.257)
C5': (44.065,117.407,65.157)
O4': (45.174,116.735,67.167)
C8: (42.905,117.396,68.989)
O2': (44.978,113.660,67.512)
C6: (43.576,118.305,72.302)
C5: (43.448,117.857,70.989)
C4: (44.449,117.052,70.495)
P: (42.374,119.426,65.518)
C4': (44.568,116.233,65.959)
C2': (44.056,114.709,67.715)
C2: (45.567,117.150,72.376)
N1: (44.675,117.936,72.981)
N3: (45.550,116.650,71.148)
N6: (42.665,119.068,72.914)
N7: (42.477,118.071,70.025)
N9: (44.087,116.753,69.203)
O5': (42.891,117.947,65.791)
O3': (43.335,114.248,65.424)
Image (generated by PyMOL):