Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01926:01954
Extra
PDB:
ATOM 1 O3' G A1925 97.603 123.893 105.053 1.00 52.62 O
ATOM 2 P U A1926 97.455 122.324 104.700 1.00 50.77 P
ATOM 3 OP1 U A1926 96.028 122.100 104.390 1.00 51.08 O
ATOM 4 OP2 U A1926 98.066 121.619 105.855 1.00 54.80 O
ATOM 5 O5' U A1926 98.347 121.983 103.427 1.00 49.78 O
ATOM 6 C5' U A1926 97.834 121.092 102.411 1.00 48.78 C
ATOM 7 C4' U A1926 98.499 119.722 102.460 1.00 48.60 C
ATOM 8 O4' U A1926 99.866 119.798 101.971 1.00 49.12 O
ATOM 9 C3' U A1926 98.553 118.928 103.767 1.00 49.39 C
ATOM 10 O3' U A1926 98.348 117.540 103.479 1.00 50.54 O
ATOM 11 C2' U A1926 100.011 119.084 104.191 1.00 48.08 C
ATOM 12 O2' U A1926 100.484 117.979 104.928 1.00 48.20 O
ATOM 13 C1' U A1926 100.717 119.080 102.840 1.00 46.79 C
ATOM 14 N1 U A1926 102.040 119.723 102.836 1.00 45.29 N
ATOM 15 C2 U A1926 103.097 119.018 102.286 1.00 44.73 C
ATOM 16 O2 U A1926 102.988 117.895 101.834 1.00 44.98 O
ATOM 17 N3 U A1926 104.295 119.680 102.283 1.00 44.48 N
ATOM 18 C4 U A1926 104.544 120.944 102.762 1.00 44.35 C
ATOM 19 O4 U A1926 105.671 121.415 102.648 1.00 44.99 O
ATOM 20 C5 U A1926 103.410 121.605 103.331 1.00 44.35 C
ATOM 21 C6 U A1926 102.227 120.988 103.350 1.00 44.28 C
ATOM 22 P A A1927 97.170 116.727 104.217 1.00 50.09 P
ATOM 23 OP1 A A1927 97.417 115.289 103.951 1.00 49.23 O
ATOM 24 OP2 A A1927 95.856 117.331 103.857 1.00 48.66 O
ATOM 25 O5' A A1927 97.418 116.975 105.767 1.00 50.37 O
TER
ATOM 1 O3' A B1953 102.877 111.897 102.975 1.00 54.58 O
ATOM 2 P U B1954 104.268 112.548 103.425 1.00 53.96 P
ATOM 3 OP1 U B1954 105.368 111.812 102.745 1.00 51.51 O
ATOM 4 OP2 U B1954 104.281 112.688 104.898 1.00 54.58 O
ATOM 5 O5' U B1954 104.146 114.021 102.847 1.00 52.93 O
ATOM 6 C5' U B1954 104.831 114.399 101.671 1.00 49.70 C
ATOM 7 C4' U B1954 105.366 115.789 101.828 1.00 49.38 C
ATOM 8 O4' U B1954 105.939 115.961 103.147 1.00 50.00 O
ATOM 9 C3' U B1954 106.498 116.073 100.873 1.00 48.91 C
ATOM 10 O3' U B1954 105.968 116.454 99.624 1.00 47.14 O
ATOM 11 C2' U B1954 107.273 117.161 101.594 1.00 50.35 C
ATOM 12 O2' U B1954 106.673 118.432 101.474 1.00 53.08 O
ATOM 13 C1' U B1954 107.146 116.697 103.049 1.00 51.42 C
ATOM 14 N1 U B1954 108.248 115.832 103.505 1.00 53.31 N
ATOM 15 C2 U B1954 109.535 116.350 103.498 1.00 53.95 C
ATOM 16 O2 U B1954 109.795 117.488 103.138 1.00 57.11 O
ATOM 17 N3 U B1954 110.507 115.488 103.934 1.00 53.81 N
ATOM 18 C4 U B1954 110.336 114.194 104.368 1.00 53.48 C
ATOM 19 O4 U B1954 111.318 113.537 104.709 1.00 54.84 O
ATOM 20 C5 U B1954 108.985 113.732 104.351 1.00 53.47 C
ATOM 21 C6 U B1954 108.013 114.542 103.930 1.00 52.94 C
ATOM 22 P G B1955 106.575 115.820 98.297 1.00 47.59 P
ATOM 23 OP1 G B1955 105.876 116.443 97.143 1.00 49.01 O
ATOM 24 OP2 G B1955 106.604 114.340 98.432 1.00 49.09 O
ATOM 25 O5' G B1955 108.070 116.352 98.324 1.00 49.45 O
TER
ATOM 2 P U A1926 97.455 122.324 104.700 1.00 50.77 P
ATOM 3 OP1 U A1926 96.028 122.100 104.390 1.00 51.08 O
ATOM 4 OP2 U A1926 98.066 121.619 105.855 1.00 54.80 O
ATOM 5 O5' U A1926 98.347 121.983 103.427 1.00 49.78 O
ATOM 6 C5' U A1926 97.834 121.092 102.411 1.00 48.78 C
ATOM 7 C4' U A1926 98.499 119.722 102.460 1.00 48.60 C
ATOM 8 O4' U A1926 99.866 119.798 101.971 1.00 49.12 O
ATOM 9 C3' U A1926 98.553 118.928 103.767 1.00 49.39 C
ATOM 10 O3' U A1926 98.348 117.540 103.479 1.00 50.54 O
ATOM 11 C2' U A1926 100.011 119.084 104.191 1.00 48.08 C
ATOM 12 O2' U A1926 100.484 117.979 104.928 1.00 48.20 O
ATOM 13 C1' U A1926 100.717 119.080 102.840 1.00 46.79 C
ATOM 14 N1 U A1926 102.040 119.723 102.836 1.00 45.29 N
ATOM 15 C2 U A1926 103.097 119.018 102.286 1.00 44.73 C
ATOM 16 O2 U A1926 102.988 117.895 101.834 1.00 44.98 O
ATOM 17 N3 U A1926 104.295 119.680 102.283 1.00 44.48 N
ATOM 18 C4 U A1926 104.544 120.944 102.762 1.00 44.35 C
ATOM 19 O4 U A1926 105.671 121.415 102.648 1.00 44.99 O
ATOM 20 C5 U A1926 103.410 121.605 103.331 1.00 44.35 C
ATOM 21 C6 U A1926 102.227 120.988 103.350 1.00 44.28 C
ATOM 22 P A A1927 97.170 116.727 104.217 1.00 50.09 P
ATOM 23 OP1 A A1927 97.417 115.289 103.951 1.00 49.23 O
ATOM 24 OP2 A A1927 95.856 117.331 103.857 1.00 48.66 O
ATOM 25 O5' A A1927 97.418 116.975 105.767 1.00 50.37 O
TER
ATOM 1 O3' A B1953 102.877 111.897 102.975 1.00 54.58 O
ATOM 2 P U B1954 104.268 112.548 103.425 1.00 53.96 P
ATOM 3 OP1 U B1954 105.368 111.812 102.745 1.00 51.51 O
ATOM 4 OP2 U B1954 104.281 112.688 104.898 1.00 54.58 O
ATOM 5 O5' U B1954 104.146 114.021 102.847 1.00 52.93 O
ATOM 6 C5' U B1954 104.831 114.399 101.671 1.00 49.70 C
ATOM 7 C4' U B1954 105.366 115.789 101.828 1.00 49.38 C
ATOM 8 O4' U B1954 105.939 115.961 103.147 1.00 50.00 O
ATOM 9 C3' U B1954 106.498 116.073 100.873 1.00 48.91 C
ATOM 10 O3' U B1954 105.968 116.454 99.624 1.00 47.14 O
ATOM 11 C2' U B1954 107.273 117.161 101.594 1.00 50.35 C
ATOM 12 O2' U B1954 106.673 118.432 101.474 1.00 53.08 O
ATOM 13 C1' U B1954 107.146 116.697 103.049 1.00 51.42 C
ATOM 14 N1 U B1954 108.248 115.832 103.505 1.00 53.31 N
ATOM 15 C2 U B1954 109.535 116.350 103.498 1.00 53.95 C
ATOM 16 O2 U B1954 109.795 117.488 103.138 1.00 57.11 O
ATOM 17 N3 U B1954 110.507 115.488 103.934 1.00 53.81 N
ATOM 18 C4 U B1954 110.336 114.194 104.368 1.00 53.48 C
ATOM 19 O4 U B1954 111.318 113.537 104.709 1.00 54.84 O
ATOM 20 C5 U B1954 108.985 113.732 104.351 1.00 53.47 C
ATOM 21 C6 U B1954 108.013 114.542 103.930 1.00 52.94 C
ATOM 22 P G B1955 106.575 115.820 98.297 1.00 47.59 P
ATOM 23 OP1 G B1955 105.876 116.443 97.143 1.00 49.01 O
ATOM 24 OP2 G B1955 106.604 114.340 98.432 1.00 49.09 O
ATOM 25 O5' G B1955 108.070 116.352 98.324 1.00 49.45 O
TER
Atoms:
C4: (104.544,120.944,102.762)
N3: (104.295,119.680,102.283)
OP1: (96.028,122.100,104.390)
OP2: (98.066,121.619,105.855)
C2: (103.097,119.018,102.286)
C1': (100.717,119.080,102.840)
C3': (98.553,118.928,103.767)
O5': (98.347,121.983,103.427)
O4': (99.866,119.798,101.971)
C5': (97.834,121.092,102.411)
P: (97.455,122.324,104.700)
C4': (98.499,119.722,102.460)
C2': (100.011,119.084,104.191)
O2': (100.484,117.979,104.928)
N1: (102.040,119.723,102.836)
O4: (105.671,121.415,102.648)
O2: (102.988,117.895,101.834)
C6: (102.227,120.988,103.350)
C5: (103.410,121.605,103.331)
O3': (98.348,117.540,103.479)
N3: (104.295,119.680,102.283)
OP1: (96.028,122.100,104.390)
OP2: (98.066,121.619,105.855)
C2: (103.097,119.018,102.286)
C1': (100.717,119.080,102.840)
C3': (98.553,118.928,103.767)
O5': (98.347,121.983,103.427)
O4': (99.866,119.798,101.971)
C5': (97.834,121.092,102.411)
P: (97.455,122.324,104.700)
C4': (98.499,119.722,102.460)
C2': (100.011,119.084,104.191)
O2': (100.484,117.979,104.928)
N1: (102.040,119.723,102.836)
O4: (105.671,121.415,102.648)
O2: (102.988,117.895,101.834)
C6: (102.227,120.988,103.350)
C5: (103.410,121.605,103.331)
O3': (98.348,117.540,103.479)
C4: (110.336,114.194,104.368)
N3: (110.507,115.488,103.934)
OP1: (105.368,111.812,102.745)
OP2: (104.281,112.688,104.898)
C2: (109.535,116.350,103.498)
C1': (107.146,116.697,103.049)
C3': (106.498,116.073,100.873)
O5': (104.146,114.021,102.847)
O4': (105.939,115.961,103.147)
C5': (104.831,114.399,101.671)
P: (104.268,112.548,103.425)
C4': (105.366,115.789,101.828)
C2': (107.273,117.161,101.594)
O2': (106.673,118.432,101.474)
N1: (108.248,115.832,103.505)
O4: (111.318,113.537,104.709)
O2: (109.795,117.488,103.138)
C6: (108.013,114.542,103.930)
C5: (108.985,113.732,104.351)
O3': (105.968,116.454,99.624)
N3: (110.507,115.488,103.934)
OP1: (105.368,111.812,102.745)
OP2: (104.281,112.688,104.898)
C2: (109.535,116.350,103.498)
C1': (107.146,116.697,103.049)
C3': (106.498,116.073,100.873)
O5': (104.146,114.021,102.847)
O4': (105.939,115.961,103.147)
C5': (104.831,114.399,101.671)
P: (104.268,112.548,103.425)
C4': (105.366,115.789,101.828)
C2': (107.273,117.161,101.594)
O2': (106.673,118.432,101.474)
N1: (108.248,115.832,103.505)
O4: (111.318,113.537,104.709)
O2: (109.795,117.488,103.138)
C6: (108.013,114.542,103.930)
C5: (108.985,113.732,104.351)
O3': (105.968,116.454,99.624)
Image (generated by PyMOL):