ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0630:0631

Extra

PDB:
ATOM 1 O3' G A 629 40.038 125.274 64.398 1.00 29.28 O
ATOM 2 P G A 630 39.782 123.686 64.446 1.00 32.92 P
ATOM 3 OP1 G A 630 40.083 123.132 63.101 1.00 33.00 O
ATOM 4 OP2 G A 630 38.449 123.450 65.054 1.00 33.96 O
ATOM 5 O5' G A 630 40.885 123.132 65.451 1.00 33.53 O
ATOM 6 C5' G A 630 42.287 123.229 65.141 1.00 33.13 C
ATOM 7 C4' G A 630 43.109 122.711 66.292 1.00 33.93 C
ATOM 8 O4' G A 630 42.951 123.565 67.454 1.00 34.54 O
ATOM 9 C3' G A 630 42.683 121.350 66.790 1.00 34.12 C
ATOM 10 O3' G A 630 43.216 120.332 65.969 1.00 33.48 O
ATOM 11 C2' G A 630 43.233 121.337 68.204 1.00 33.69 C
ATOM 12 O2' G A 630 44.627 121.109 68.211 1.00 33.67 O
ATOM 13 C1' G A 630 42.946 122.776 68.635 1.00 33.83 C
ATOM 14 N9 G A 630 41.635 122.933 69.258 1.00 35.61 N
ATOM 15 C8 G A 630 40.472 123.290 68.623 1.00 34.21 C
ATOM 16 N7 G A 630 39.451 123.355 69.424 1.00 33.90 N
ATOM 17 C5 G A 630 39.963 123.018 70.668 1.00 34.36 C
ATOM 18 C6 G A 630 39.318 122.914 71.923 1.00 35.25 C
ATOM 19 O6 G A 630 38.133 123.118 72.195 1.00 37.35 O
ATOM 20 N1 G A 630 40.199 122.531 72.924 1.00 34.88 N
ATOM 21 C2 G A 630 41.531 122.289 72.748 1.00 36.92 C
ATOM 22 N2 G A 630 42.207 121.922 73.852 1.00 38.08 N
ATOM 23 N3 G A 630 42.156 122.394 71.579 1.00 37.19 N
ATOM 24 C4 G A 630 41.311 122.757 70.588 1.00 36.15 C
ATOM 25 P A A 631 42.217 119.343 65.201 1.00 31.74 P
ATOM 26 OP1 A A 631 42.410 119.592 63.755 1.00 34.29 O
ATOM 27 OP2 A A 631 40.857 119.457 65.793 1.00 28.47 O
ATOM 28 O5' A A 631 42.791 117.905 65.547 1.00 28.56 O
TER

ATOM 1 O3' G B 630 43.216 120.332 65.969 1.00 33.48 O
ATOM 2 P A B 631 42.217 119.343 65.201 1.00 31.74 P
ATOM 3 OP1 A B 631 42.410 119.592 63.755 1.00 34.29 O
ATOM 4 OP2 A B 631 40.857 119.457 65.793 1.00 28.47 O
ATOM 5 O5' A B 631 42.791 117.905 65.547 1.00 28.56 O
ATOM 6 C5' A B 631 43.915 117.370 64.853 1.00 25.46 C
ATOM 7 C4' A B 631 44.447 116.203 65.626 1.00 28.44 C
ATOM 8 O4' A B 631 44.991 116.692 66.874 1.00 29.08 O
ATOM 9 C3' A B 631 43.380 115.200 66.032 1.00 28.29 C
ATOM 10 O3' A B 631 43.246 114.228 65.008 1.00 31.38 O
ATOM 11 C2' A B 631 43.970 114.590 67.293 1.00 28.73 C
ATOM 12 O2' A B 631 44.963 113.641 66.973 1.00 28.91 O
ATOM 13 C1' A B 631 44.652 115.806 67.923 1.00 28.56 C
ATOM 14 N9 A B 631 43.850 116.561 68.882 1.00 29.02 N
ATOM 15 C8 A B 631 42.602 117.106 68.706 1.00 29.82 C
ATOM 16 N7 A B 631 42.177 117.792 69.733 1.00 29.81 N
ATOM 17 C5 A B 631 43.206 117.679 70.657 1.00 30.24 C
ATOM 18 C6 A B 631 43.374 118.189 71.952 1.00 31.50 C
ATOM 19 N6 A B 631 42.466 118.944 72.577 1.00 31.74 N
ATOM 20 N1 A B 631 44.523 117.893 72.597 1.00 32.09 N
ATOM 21 C2 A B 631 45.427 117.127 71.980 1.00 29.76 C
ATOM 22 N3 A B 631 45.382 116.589 70.773 1.00 30.04 N
ATOM 23 C4 A B 631 44.234 116.910 70.152 1.00 29.36 C
ATOM 24 P G B 632 41.829 113.522 64.736 1.00 31.52 P
ATOM 25 OP1 G B 632 40.922 114.481 64.078 1.00 31.87 O
ATOM 26 OP2 G B 632 41.396 112.827 65.967 1.00 29.98 O
ATOM 27 O5' G B 632 42.220 112.405 63.685 1.00 30.03 O
TER

Atoms:
OP1: (40.083,123.132,63.101)
OP2: (38.449,123.450,65.054)
C3': (42.683,121.350,66.790)
C1': (42.946,122.776,68.635)
C5': (42.287,123.229,65.141)
O6: (38.133,123.118,72.195)
O4': (42.951,123.565,67.454)
C8: (40.472,123.290,68.623)
C2: (41.531,122.289,72.748)
C6: (39.318,122.914,71.923)
C5: (39.963,123.018,70.668)
C4: (41.311,122.757,70.588)
P: (39.782,123.686,64.446)
C4': (43.109,122.711,66.292)
C2': (43.233,121.337,68.204)
O2': (44.627,121.109,68.211)
N1: (40.199,122.531,72.924)
N2: (42.207,121.922,73.852)
N3: (42.156,122.394,71.579)
N7: (39.451,123.355,69.424)
N9: (41.635,122.933,69.258)
O5': (40.885,123.132,65.451)
O3': (43.216,120.332,65.969)
OP1: (42.410,119.592,63.755)
OP2: (40.857,119.457,65.793)
C3': (43.380,115.200,66.032)
C1': (44.652,115.806,67.923)
C5': (43.915,117.370,64.853)
O4': (44.991,116.692,66.874)
C8: (42.602,117.106,68.706)
O2': (44.963,113.641,66.973)
C6: (43.374,118.189,71.952)
C5: (43.206,117.679,70.657)
C4: (44.234,116.910,70.152)
P: (42.217,119.343,65.201)
C4': (44.447,116.203,65.626)
C2': (43.970,114.590,67.293)
C2: (45.427,117.127,71.980)
N1: (44.523,117.893,72.597)
N3: (45.382,116.589,70.773)
N6: (42.466,118.944,72.577)
N7: (42.177,117.792,69.733)
N9: (43.850,116.561,68.882)
O5': (42.791,117.905,65.547)
O3': (43.246,114.228,65.008)
Image (generated by PyMOL):
PyMOL image
show in jmol