Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0630:0631
Extra
PDB:
ATOM 1 O3' G A 629 40.130 125.283 64.428 1.00 25.58 O
ATOM 2 P G A 630 39.865 123.697 64.468 1.00 28.79 P
ATOM 3 OP1 G A 630 40.200 123.156 63.131 1.00 29.46 O
ATOM 4 OP2 G A 630 38.518 123.443 65.036 1.00 30.97 O
ATOM 5 O5' G A 630 40.949 123.147 65.497 1.00 29.56 O
ATOM 6 C5' G A 630 42.356 123.207 65.187 1.00 28.99 C
ATOM 7 C4' G A 630 43.169 122.698 66.346 1.00 27.99 C
ATOM 8 O4' G A 630 42.968 123.550 67.498 1.00 30.10 O
ATOM 9 C3' G A 630 42.758 121.334 66.842 1.00 28.05 C
ATOM 10 O3' G A 630 43.304 120.322 66.024 1.00 27.65 O
ATOM 11 C2' G A 630 43.284 121.338 68.267 1.00 27.20 C
ATOM 12 O2' G A 630 44.679 121.143 68.325 1.00 23.64 O
ATOM 13 C1' G A 630 42.969 122.772 68.681 1.00 27.66 C
ATOM 14 N9 G A 630 41.665 122.934 69.316 1.00 29.36 N
ATOM 15 C8 G A 630 40.498 123.324 68.706 1.00 29.45 C
ATOM 16 N7 G A 630 39.492 123.410 69.531 1.00 29.95 N
ATOM 17 C5 G A 630 40.023 123.050 70.761 1.00 31.73 C
ATOM 18 C6 G A 630 39.405 122.956 72.032 1.00 33.33 C
ATOM 19 O6 G A 630 38.241 123.196 72.333 1.00 37.95 O
ATOM 20 N1 G A 630 40.297 122.538 73.012 1.00 32.91 N
ATOM 21 C2 G A 630 41.620 122.255 72.803 1.00 33.59 C
ATOM 22 N2 G A 630 42.315 121.866 73.893 1.00 32.78 N
ATOM 23 N3 G A 630 42.219 122.346 71.618 1.00 32.08 N
ATOM 24 C4 G A 630 41.362 122.745 70.648 1.00 31.31 C
ATOM 25 P A A 631 42.315 119.351 65.223 1.00 26.41 P
ATOM 26 OP1 A A 631 42.555 119.594 63.787 1.00 30.04 O
ATOM 27 OP2 A A 631 40.946 119.504 65.771 1.00 24.19 O
ATOM 28 O5' A A 631 42.846 117.899 65.577 1.00 22.51 O
TER
ATOM 1 O3' G B 630 43.304 120.322 66.024 1.00 27.65 O
ATOM 2 P A B 631 42.315 119.351 65.223 1.00 26.41 P
ATOM 3 OP1 A B 631 42.555 119.594 63.787 1.00 30.04 O
ATOM 4 OP2 A B 631 40.946 119.504 65.771 1.00 24.19 O
ATOM 5 O5' A B 631 42.846 117.899 65.577 1.00 22.51 O
ATOM 6 C5' A B 631 43.900 117.299 64.827 1.00 21.00 C
ATOM 7 C4' A B 631 44.458 116.151 65.607 1.00 23.45 C
ATOM 8 O4' A B 631 45.008 116.671 66.835 1.00 24.48 O
ATOM 9 C3' A B 631 43.414 115.141 66.044 1.00 24.50 C
ATOM 10 O3' A B 631 43.296 114.157 65.032 1.00 26.03 O
ATOM 11 C2' A B 631 44.028 114.567 67.310 1.00 25.67 C
ATOM 12 O2' A B 631 45.038 113.626 67.019 1.00 26.44 O
ATOM 13 C1' A B 631 44.703 115.804 67.901 1.00 25.05 C
ATOM 14 N9 A B 631 43.912 116.569 68.856 1.00 26.95 N
ATOM 15 C8 A B 631 42.673 117.133 68.685 1.00 27.62 C
ATOM 16 N7 A B 631 42.263 117.825 69.717 1.00 27.23 N
ATOM 17 C5 A B 631 43.294 117.694 70.635 1.00 28.48 C
ATOM 18 C6 A B 631 43.475 118.199 71.928 1.00 29.69 C
ATOM 19 N6 A B 631 42.577 118.958 72.558 1.00 32.76 N
ATOM 20 N1 A B 631 44.623 117.889 72.566 1.00 29.45 N
ATOM 21 C2 A B 631 45.513 117.108 71.946 1.00 28.13 C
ATOM 22 N3 A B 631 45.455 116.568 70.737 1.00 28.45 N
ATOM 23 C4 A B 631 44.308 116.909 70.123 1.00 28.42 C
ATOM 24 P G B 632 41.874 113.493 64.706 1.00 27.68 P
ATOM 25 OP1 G B 632 40.991 114.482 64.047 1.00 26.04 O
ATOM 26 OP2 G B 632 41.414 112.800 65.933 1.00 27.35 O
ATOM 27 O5' G B 632 42.269 112.377 63.649 1.00 26.37 O
TER
ATOM 2 P G A 630 39.865 123.697 64.468 1.00 28.79 P
ATOM 3 OP1 G A 630 40.200 123.156 63.131 1.00 29.46 O
ATOM 4 OP2 G A 630 38.518 123.443 65.036 1.00 30.97 O
ATOM 5 O5' G A 630 40.949 123.147 65.497 1.00 29.56 O
ATOM 6 C5' G A 630 42.356 123.207 65.187 1.00 28.99 C
ATOM 7 C4' G A 630 43.169 122.698 66.346 1.00 27.99 C
ATOM 8 O4' G A 630 42.968 123.550 67.498 1.00 30.10 O
ATOM 9 C3' G A 630 42.758 121.334 66.842 1.00 28.05 C
ATOM 10 O3' G A 630 43.304 120.322 66.024 1.00 27.65 O
ATOM 11 C2' G A 630 43.284 121.338 68.267 1.00 27.20 C
ATOM 12 O2' G A 630 44.679 121.143 68.325 1.00 23.64 O
ATOM 13 C1' G A 630 42.969 122.772 68.681 1.00 27.66 C
ATOM 14 N9 G A 630 41.665 122.934 69.316 1.00 29.36 N
ATOM 15 C8 G A 630 40.498 123.324 68.706 1.00 29.45 C
ATOM 16 N7 G A 630 39.492 123.410 69.531 1.00 29.95 N
ATOM 17 C5 G A 630 40.023 123.050 70.761 1.00 31.73 C
ATOM 18 C6 G A 630 39.405 122.956 72.032 1.00 33.33 C
ATOM 19 O6 G A 630 38.241 123.196 72.333 1.00 37.95 O
ATOM 20 N1 G A 630 40.297 122.538 73.012 1.00 32.91 N
ATOM 21 C2 G A 630 41.620 122.255 72.803 1.00 33.59 C
ATOM 22 N2 G A 630 42.315 121.866 73.893 1.00 32.78 N
ATOM 23 N3 G A 630 42.219 122.346 71.618 1.00 32.08 N
ATOM 24 C4 G A 630 41.362 122.745 70.648 1.00 31.31 C
ATOM 25 P A A 631 42.315 119.351 65.223 1.00 26.41 P
ATOM 26 OP1 A A 631 42.555 119.594 63.787 1.00 30.04 O
ATOM 27 OP2 A A 631 40.946 119.504 65.771 1.00 24.19 O
ATOM 28 O5' A A 631 42.846 117.899 65.577 1.00 22.51 O
TER
ATOM 1 O3' G B 630 43.304 120.322 66.024 1.00 27.65 O
ATOM 2 P A B 631 42.315 119.351 65.223 1.00 26.41 P
ATOM 3 OP1 A B 631 42.555 119.594 63.787 1.00 30.04 O
ATOM 4 OP2 A B 631 40.946 119.504 65.771 1.00 24.19 O
ATOM 5 O5' A B 631 42.846 117.899 65.577 1.00 22.51 O
ATOM 6 C5' A B 631 43.900 117.299 64.827 1.00 21.00 C
ATOM 7 C4' A B 631 44.458 116.151 65.607 1.00 23.45 C
ATOM 8 O4' A B 631 45.008 116.671 66.835 1.00 24.48 O
ATOM 9 C3' A B 631 43.414 115.141 66.044 1.00 24.50 C
ATOM 10 O3' A B 631 43.296 114.157 65.032 1.00 26.03 O
ATOM 11 C2' A B 631 44.028 114.567 67.310 1.00 25.67 C
ATOM 12 O2' A B 631 45.038 113.626 67.019 1.00 26.44 O
ATOM 13 C1' A B 631 44.703 115.804 67.901 1.00 25.05 C
ATOM 14 N9 A B 631 43.912 116.569 68.856 1.00 26.95 N
ATOM 15 C8 A B 631 42.673 117.133 68.685 1.00 27.62 C
ATOM 16 N7 A B 631 42.263 117.825 69.717 1.00 27.23 N
ATOM 17 C5 A B 631 43.294 117.694 70.635 1.00 28.48 C
ATOM 18 C6 A B 631 43.475 118.199 71.928 1.00 29.69 C
ATOM 19 N6 A B 631 42.577 118.958 72.558 1.00 32.76 N
ATOM 20 N1 A B 631 44.623 117.889 72.566 1.00 29.45 N
ATOM 21 C2 A B 631 45.513 117.108 71.946 1.00 28.13 C
ATOM 22 N3 A B 631 45.455 116.568 70.737 1.00 28.45 N
ATOM 23 C4 A B 631 44.308 116.909 70.123 1.00 28.42 C
ATOM 24 P G B 632 41.874 113.493 64.706 1.00 27.68 P
ATOM 25 OP1 G B 632 40.991 114.482 64.047 1.00 26.04 O
ATOM 26 OP2 G B 632 41.414 112.800 65.933 1.00 27.35 O
ATOM 27 O5' G B 632 42.269 112.377 63.649 1.00 26.37 O
TER
Atoms:
OP1: (40.200,123.156,63.131)
OP2: (38.518,123.443,65.036)
C3': (42.758,121.334,66.842)
C1': (42.969,122.772,68.681)
C5': (42.356,123.207,65.187)
O6: (38.241,123.196,72.333)
O4': (42.968,123.550,67.498)
C8: (40.498,123.324,68.706)
C2: (41.620,122.255,72.803)
C6: (39.405,122.956,72.032)
C5: (40.023,123.050,70.761)
C4: (41.362,122.745,70.648)
P: (39.865,123.697,64.468)
C4': (43.169,122.698,66.346)
C2': (43.284,121.338,68.267)
O2': (44.679,121.143,68.325)
N1: (40.297,122.538,73.012)
N2: (42.315,121.866,73.893)
N3: (42.219,122.346,71.618)
N7: (39.492,123.410,69.531)
N9: (41.665,122.934,69.316)
O5': (40.949,123.147,65.497)
O3': (43.304,120.322,66.024)
OP2: (38.518,123.443,65.036)
C3': (42.758,121.334,66.842)
C1': (42.969,122.772,68.681)
C5': (42.356,123.207,65.187)
O6: (38.241,123.196,72.333)
O4': (42.968,123.550,67.498)
C8: (40.498,123.324,68.706)
C2: (41.620,122.255,72.803)
C6: (39.405,122.956,72.032)
C5: (40.023,123.050,70.761)
C4: (41.362,122.745,70.648)
P: (39.865,123.697,64.468)
C4': (43.169,122.698,66.346)
C2': (43.284,121.338,68.267)
O2': (44.679,121.143,68.325)
N1: (40.297,122.538,73.012)
N2: (42.315,121.866,73.893)
N3: (42.219,122.346,71.618)
N7: (39.492,123.410,69.531)
N9: (41.665,122.934,69.316)
O5': (40.949,123.147,65.497)
O3': (43.304,120.322,66.024)
OP1: (42.555,119.594,63.787)
OP2: (40.946,119.504,65.771)
C3': (43.414,115.141,66.044)
C1': (44.703,115.804,67.901)
C5': (43.900,117.299,64.827)
O4': (45.008,116.671,66.835)
C8: (42.673,117.133,68.685)
O2': (45.038,113.626,67.019)
C6: (43.475,118.199,71.928)
C5: (43.294,117.694,70.635)
C4: (44.308,116.909,70.123)
P: (42.315,119.351,65.223)
C4': (44.458,116.151,65.607)
C2': (44.028,114.567,67.310)
C2: (45.513,117.108,71.946)
N1: (44.623,117.889,72.566)
N3: (45.455,116.568,70.737)
N6: (42.577,118.958,72.558)
N7: (42.263,117.825,69.717)
N9: (43.912,116.569,68.856)
O5': (42.846,117.899,65.577)
O3': (43.296,114.157,65.032)
OP2: (40.946,119.504,65.771)
C3': (43.414,115.141,66.044)
C1': (44.703,115.804,67.901)
C5': (43.900,117.299,64.827)
O4': (45.008,116.671,66.835)
C8: (42.673,117.133,68.685)
O2': (45.038,113.626,67.019)
C6: (43.475,118.199,71.928)
C5: (43.294,117.694,70.635)
C4: (44.308,116.909,70.123)
P: (42.315,119.351,65.223)
C4': (44.458,116.151,65.607)
C2': (44.028,114.567,67.310)
C2: (45.513,117.108,71.946)
N1: (44.623,117.889,72.566)
N3: (45.455,116.568,70.737)
N6: (42.577,118.958,72.558)
N7: (42.263,117.825,69.717)
N9: (43.912,116.569,68.856)
O5': (42.846,117.899,65.577)
O3': (43.296,114.157,65.032)
Image (generated by PyMOL):