ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CD6:01247:01246

Extra

PDB:
ATOM 1 O3' A A1246 16.195 85.864 91.406 1.00 41.58 O
ATOM 2 P U A1247 16.906 86.288 90.029 1.00 39.85 P
ATOM 3 OP1 U A1247 17.909 87.301 90.446 1.00 40.70 O
ATOM 4 OP2 U A1247 15.887 86.653 89.018 1.00 37.74 O
ATOM 5 O5' U A1247 17.661 84.969 89.540 1.00 39.14 O
ATOM 6 C5' U A1247 18.917 84.572 90.124 1.00 38.60 C
ATOM 7 C4' U A1247 19.311 83.187 89.655 1.00 40.53 C
ATOM 8 O4' U A1247 18.278 82.234 90.027 1.00 42.26 O
ATOM 9 C3' U A1247 19.459 82.974 88.159 1.00 40.96 C
ATOM 10 O3' U A1247 20.714 83.432 87.670 1.00 42.91 O
ATOM 11 C2' U A1247 19.331 81.457 88.054 1.00 41.07 C
ATOM 12 O2' U A1247 20.485 80.752 88.467 1.00 38.59 O
ATOM 13 C1' U A1247 18.225 81.182 89.070 1.00 40.97 C
ATOM 14 N1 U A1247 16.886 81.156 88.453 1.00 42.06 N
ATOM 15 C2 U A1247 16.552 80.062 87.667 1.00 41.38 C
ATOM 16 O2 U A1247 17.302 79.129 87.469 1.00 41.55 O
ATOM 17 N3 U A1247 15.302 80.105 87.115 1.00 42.33 N
ATOM 18 C4 U A1247 14.364 81.096 87.256 1.00 43.63 C
ATOM 19 O4 U A1247 13.278 80.980 86.689 1.00 47.04 O
ATOM 20 C5 U A1247 14.772 82.194 88.080 1.00 43.89 C
ATOM 21 C6 U A1247 15.986 82.187 88.638 1.00 43.39 C
ATOM 22 P C A1248 20.774 84.461 86.428 1.00 42.78 P
ATOM 23 OP1 C A1248 19.711 84.152 85.446 1.00 42.09 O
ATOM 24 OP2 C A1248 22.186 84.464 85.984 1.00 45.08 O
ATOM 25 O5' C A1248 20.465 85.878 87.093 1.00 44.15 O
TER

ATOM 1 O3' A B1245 12.990 85.173 87.936 1.00 43.29 O
ATOM 2 P A B1246 11.890 85.585 89.027 1.00 44.95 P
ATOM 3 OP1 A B1246 10.697 84.771 88.732 1.00 49.71 O
ATOM 4 OP2 A B1246 11.760 87.055 89.096 1.00 45.33 O
ATOM 5 O5' A B1246 12.494 85.031 90.390 1.00 44.64 O
ATOM 6 C5' A B1246 12.952 85.910 91.433 1.00 42.20 C
ATOM 7 C4' A B1246 14.019 85.219 92.237 1.00 41.36 C
ATOM 8 O4' A B1246 13.472 83.972 92.734 1.00 40.29 O
ATOM 9 C3' A B1246 15.243 84.803 91.433 1.00 42.71 C
ATOM 10 O3' A B1246 16.195 85.864 91.406 1.00 41.58 O
ATOM 11 C2' A B1246 15.764 83.617 92.231 1.00 43.00 C
ATOM 12 O2' A B1246 16.478 84.043 93.380 1.00 47.00 O
ATOM 13 C1' A B1246 14.455 82.955 92.671 1.00 40.13 C
ATOM 14 N9 A B1246 13.972 81.922 91.759 1.00 37.07 N
ATOM 15 C8 A B1246 12.806 81.918 91.034 1.00 37.12 C
ATOM 16 N7 A B1246 12.653 80.857 90.280 1.00 35.94 N
ATOM 17 C5 A B1246 13.792 80.111 90.527 1.00 36.59 C
ATOM 18 C6 A B1246 14.235 78.884 90.024 1.00 37.91 C
ATOM 19 N6 A B1246 13.557 78.168 89.130 1.00 39.95 N
ATOM 20 N1 A B1246 15.416 78.410 90.473 1.00 39.01 N
ATOM 21 C2 A B1246 16.097 79.136 91.374 1.00 40.94 C
ATOM 22 N3 A B1246 15.782 80.311 91.923 1.00 38.56 N
ATOM 23 C4 A B1246 14.607 80.749 91.447 1.00 37.42 C
ATOM 24 P U B1247 16.906 86.288 90.029 1.00 39.85 P
ATOM 25 OP1 U B1247 17.909 87.301 90.446 1.00 40.70 O
ATOM 26 OP2 U B1247 15.887 86.653 89.018 1.00 37.74 O
ATOM 27 O5' U B1247 17.661 84.969 89.540 1.00 39.14 O
TER

Atoms:
C4: (14.364,81.096,87.256)
N3: (15.302,80.105,87.115)
OP1: (17.909,87.301,90.446)
OP2: (15.887,86.653,89.018)
C2: (16.552,80.062,87.667)
C1': (18.225,81.182,89.070)
C3': (19.459,82.974,88.159)
O5': (17.661,84.969,89.540)
O4': (18.278,82.234,90.027)
C5': (18.917,84.572,90.124)
P: (16.906,86.288,90.029)
C4': (19.311,83.187,89.655)
C2': (19.331,81.457,88.054)
O2': (20.485,80.752,88.467)
N1: (16.886,81.156,88.453)
O4: (13.278,80.980,86.689)
O2: (17.302,79.129,87.469)
C6: (15.986,82.187,88.638)
C5: (14.772,82.194,88.080)
O3': (20.714,83.432,87.670)
OP1: (10.697,84.771,88.732)
OP2: (11.760,87.055,89.096)
C3': (15.243,84.803,91.433)
C1': (14.455,82.955,92.671)
C5': (12.952,85.910,91.433)
O4': (13.472,83.972,92.734)
C8: (12.806,81.918,91.034)
O2': (16.478,84.043,93.380)
C6: (14.235,78.884,90.024)
C5: (13.792,80.111,90.527)
C4: (14.607,80.749,91.447)
P: (11.890,85.585,89.027)
C4': (14.019,85.219,92.237)
C2': (15.764,83.617,92.231)
C2: (16.097,79.136,91.374)
N1: (15.416,78.410,90.473)
N3: (15.782,80.311,91.923)
N6: (13.557,78.168,89.130)
N7: (12.653,80.857,90.280)
N9: (13.972,81.922,91.759)
O5': (12.494,85.031,90.390)
O3': (16.195,85.864,91.406)
Image (generated by PyMOL):
PyMOL image
show in jmol