ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2DU4:C42:C44

Extra

PDB:
ATOM 1 O3' C A 41 12.290 38.021 -40.558 1.00196.35 O
ATOM 2 P U A 42 12.007 39.175 -41.648 1.00197.14 P
ATOM 3 OP1 U A 42 10.692 39.781 -41.310 1.00201.27 O
ATOM 4 OP2 U A 42 12.213 38.590 -43.001 1.00185.49 O
ATOM 5 O5' U A 42 13.146 40.276 -41.410 1.00199.14 O
ATOM 6 C5' U A 42 13.688 40.535 -40.109 1.00193.55 C
ATOM 7 C4' U A 42 14.216 41.956 -40.015 1.00192.60 C
ATOM 8 O4' U A 42 15.224 42.185 -41.039 1.00183.97 O
ATOM 9 C3' U A 42 13.192 43.064 -40.229 1.00196.67 C
ATOM 10 O3' U A 42 12.508 43.367 -39.009 1.00201.27 O
ATOM 11 C2' U A 42 14.069 44.236 -40.658 1.00192.26 C
ATOM 12 O2' U A 42 14.672 44.916 -39.577 1.00193.81 O
ATOM 13 C1' U A 42 15.156 43.534 -41.476 1.00187.61 C
ATOM 14 N1 U A 42 14.928 43.553 -42.930 1.00183.84 N
ATOM 15 C2 U A 42 14.405 44.710 -43.492 1.00179.37 C
ATOM 16 O2 U A 42 14.120 45.702 -42.833 1.00153.28 O
ATOM 17 N3 U A 42 14.226 44.661 -44.855 1.00182.33 N
ATOM 18 C4 U A 42 14.506 43.600 -45.698 1.00181.93 C
ATOM 19 O4 U A 42 14.251 43.699 -46.901 1.00177.44 O
ATOM 20 C5 U A 42 15.043 42.444 -45.045 1.00181.99 C
ATOM 21 C6 U A 42 15.230 42.458 -43.716 1.00186.12 C
ATOM 22 P U A 43 10.905 43.192 -38.911 1.00201.27 P
ATOM 23 OP1 U A 43 10.623 42.590 -37.579 1.00201.27 O
ATOM 24 OP2 U A 43 10.401 42.526 -40.143 1.00201.27 O
ATOM 25 O5' U A 43 10.339 44.682 -38.895 1.00201.27 O
TER

ATOM 1 O3' U B 43 9.555 47.128 -40.851 1.00201.27 O
ATOM 2 P U B 44 9.279 46.111 -42.089 1.00199.46 P
ATOM 3 OP1 U B 44 7.902 46.397 -42.580 1.00166.98 O
ATOM 4 OP2 U B 44 9.634 44.725 -41.684 1.00190.45 O
ATOM 5 O5' U B 44 10.287 46.568 -43.241 1.00201.23 O
ATOM 6 C5' U B 44 10.034 46.231 -44.609 1.00201.27 C
ATOM 7 C4' U B 44 11.259 46.499 -45.468 1.00201.27 C
ATOM 8 O4' U B 44 10.980 46.052 -46.829 1.00201.27 O
ATOM 9 C3' U B 44 11.672 47.962 -45.624 1.00201.27 C
ATOM 10 O3' U B 44 12.509 48.411 -44.550 1.00200.38 O
ATOM 11 C2' U B 44 12.404 47.948 -46.965 1.00201.27 C
ATOM 12 O2' U B 44 13.728 47.457 -46.892 1.00197.11 O
ATOM 13 C1' U B 44 11.555 46.957 -47.764 1.00201.27 C
ATOM 14 N1 U B 44 10.471 47.585 -48.543 1.00200.33 N
ATOM 15 C2 U B 44 10.814 48.594 -49.440 1.00190.42 C
ATOM 16 O2 U B 44 11.969 48.971 -49.608 1.00164.19 O
ATOM 17 N3 U B 44 9.752 49.139 -50.132 1.00184.96 N
ATOM 18 C4 U B 44 8.412 48.784 -50.032 1.00177.62 C
ATOM 19 O4 U B 44 7.578 49.341 -50.752 1.00153.96 O
ATOM 20 C5 U B 44 8.140 47.738 -49.090 1.00180.31 C
ATOM 21 C6 U B 44 9.151 47.188 -48.394 1.00195.99 C
ATOM 22 P A B 45 12.442 49.952 -44.061 1.00196.09 P
ATOM 23 OP1 A B 45 11.535 50.020 -42.886 1.00187.51 O
ATOM 24 OP2 A B 45 12.173 50.818 -45.240 1.00195.25 O
ATOM 25 O5' A B 45 13.927 50.254 -43.559 1.00186.52 O
TER

Atoms:
C4: (14.506,43.600,-45.698)
N3: (14.226,44.661,-44.855)
OP1: (10.692,39.781,-41.310)
OP2: (12.213,38.590,-43.001)
C2: (14.405,44.710,-43.492)
C1': (15.156,43.534,-41.476)
C3': (13.192,43.064,-40.229)
O5': (13.146,40.276,-41.410)
O4': (15.224,42.185,-41.039)
C5': (13.688,40.535,-40.109)
P: (12.007,39.175,-41.648)
C4': (14.216,41.956,-40.015)
C2': (14.069,44.236,-40.658)
O2': (14.672,44.916,-39.577)
N1: (14.928,43.553,-42.930)
O4: (14.251,43.699,-46.901)
O2: (14.120,45.702,-42.833)
C6: (15.230,42.458,-43.716)
C5: (15.043,42.444,-45.045)
O3': (12.508,43.367,-39.009)
C4: (8.412,48.784,-50.032)
N3: (9.752,49.139,-50.132)
OP1: (7.902,46.397,-42.580)
OP2: (9.634,44.725,-41.684)
C2: (10.814,48.594,-49.440)
C1': (11.555,46.957,-47.764)
C3': (11.672,47.962,-45.624)
O5': (10.287,46.568,-43.241)
O4': (10.980,46.052,-46.829)
C5': (10.034,46.231,-44.609)
P: (9.279,46.111,-42.089)
C4': (11.259,46.499,-45.468)
C2': (12.404,47.948,-46.965)
O2': (13.728,47.457,-46.892)
N1: (10.471,47.585,-48.543)
O4: (7.578,49.341,-50.752)
O2: (11.969,48.971,-49.608)
C6: (9.151,47.188,-48.394)
C5: (8.140,47.738,-49.090)
O3': (12.509,48.411,-44.550)
Image (generated by PyMOL):
PyMOL image
show in jmol