ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2CKY:A70:A71

Extra

PDB:
ATOM 1 O3' G A 69 -12.795 9.796 -58.329 1.00 58.63 O
ATOM 2 P G A 70 -11.755 9.008 -59.262 1.00 57.41 P
ATOM 3 OP1 G A 70 -12.004 9.306 -60.699 1.00 58.25 O
ATOM 4 OP2 G A 70 -11.723 7.607 -58.794 1.00 55.68 O
ATOM 5 O5' G A 70 -10.380 9.671 -58.789 1.00 53.76 O
ATOM 6 C5' G A 70 -9.235 9.453 -59.560 1.00 52.69 C
ATOM 7 C4' G A 70 -7.965 9.777 -58.792 1.00 49.94 C
ATOM 8 O4' G A 70 -8.176 9.745 -57.361 1.00 47.16 O
ATOM 9 C3' G A 70 -6.830 8.805 -59.046 1.00 48.58 C
ATOM 10 O3' G A 70 -6.027 9.305 -60.105 1.00 50.09 O
ATOM 11 C2' G A 70 -6.098 8.719 -57.716 1.00 45.36 C
ATOM 12 O2' G A 70 -5.088 9.691 -57.668 1.00 45.66 O
ATOM 13 C1' G A 70 -7.202 8.963 -56.695 1.00 44.91 C
ATOM 14 N9 G A 70 -7.906 7.778 -56.183 1.00 44.20 N
ATOM 15 C8 G A 70 -9.200 7.443 -56.512 1.00 45.64 C
ATOM 16 N7 G A 70 -9.636 6.366 -55.940 1.00 44.08 N
ATOM 17 C5 G A 70 -8.568 5.928 -55.202 1.00 41.79 C
ATOM 18 C6 G A 70 -8.490 4.789 -54.388 1.00 40.81 C
ATOM 19 O6 G A 70 -9.382 3.952 -54.185 1.00 41.21 O
ATOM 20 N1 G A 70 -7.239 4.685 -53.779 1.00 39.41 N
ATOM 21 C2 G A 70 -6.203 5.571 -53.949 1.00 38.75 C
ATOM 22 N2 G A 70 -5.075 5.311 -53.282 1.00 36.74 N
ATOM 23 N3 G A 70 -6.281 6.650 -54.720 1.00 40.97 N
ATOM 24 C4 G A 70 -7.488 6.772 -55.327 1.00 42.17 C
ATOM 25 P A A 71 -6.604 9.154 -61.581 1.00 53.78 P
ATOM 26 OP1 A A 71 -6.727 10.519 -62.116 1.00 57.59 O
ATOM 27 OP2 A A 71 -7.823 8.316 -61.597 1.00 53.58 O
ATOM 28 O5' A A 71 -5.419 8.368 -62.311 1.00 52.79 O
TER

ATOM 1 O3' G B 70 -6.027 9.305 -60.105 1.00 50.09 O
ATOM 2 P A B 71 -6.604 9.154 -61.581 1.00 53.78 P
ATOM 3 OP1 A B 71 -6.727 10.519 -62.116 1.00 57.59 O
ATOM 4 OP2 A B 71 -7.823 8.316 -61.597 1.00 53.58 O
ATOM 5 O5' A B 71 -5.419 8.368 -62.311 1.00 52.79 O
ATOM 6 C5' A B 71 -4.647 8.954 -63.333 1.00 54.72 C
ATOM 7 C4' A B 71 -3.249 8.386 -63.346 1.00 53.09 C
ATOM 8 O4' A B 71 -2.677 8.480 -62.028 1.00 51.38 O
ATOM 9 C3' A B 71 -3.194 6.930 -63.722 1.00 52.26 C
ATOM 10 O3' A B 71 -3.064 6.837 -65.126 1.00 55.13 O
ATOM 11 C2' A B 71 -1.978 6.426 -62.952 1.00 51.04 C
ATOM 12 O2' A B 71 -0.759 6.547 -63.651 1.00 53.66 O
ATOM 13 C1' A B 71 -1.972 7.301 -61.704 1.00 49.87 C
ATOM 14 N9 A B 71 -2.628 6.675 -60.563 1.00 47.41 N
ATOM 15 C8 A B 71 -3.972 6.488 -60.395 1.00 47.55 C
ATOM 16 N7 A B 71 -4.305 5.876 -59.282 1.00 45.17 N
ATOM 17 C5 A B 71 -3.092 5.642 -58.677 1.00 43.76 C
ATOM 18 C6 A B 71 -2.763 5.018 -57.460 1.00 41.49 C
ATOM 19 N6 A B 71 -3.694 4.521 -56.642 1.00 41.03 N
ATOM 20 N1 A B 71 -1.462 4.915 -57.120 1.00 40.39 N
ATOM 21 C2 A B 71 -0.560 5.425 -57.970 1.00 42.97 C
ATOM 22 N3 A B 71 -0.749 6.037 -59.156 1.00 45.37 N
ATOM 23 C4 A B 71 -2.050 6.124 -59.450 1.00 45.38 C
ATOM 24 P G B 72 -3.907 5.751 -65.934 1.00 56.45 P
ATOM 25 OP1 G B 72 -3.375 5.706 -67.305 1.00 58.38 O
ATOM 26 OP2 G B 72 -5.349 5.948 -65.700 1.00 56.38 O
ATOM 27 O5' G B 72 -3.530 4.423 -65.120 1.00 55.76 O
TER

Atoms:
OP1: (-12.004,9.306,-60.699)
OP2: (-11.723,7.607,-58.794)
C3': (-6.830,8.805,-59.046)
C1': (-7.202,8.963,-56.695)
C5': (-9.235,9.453,-59.560)
O6: (-9.382,3.952,-54.185)
O4': (-8.176,9.745,-57.361)
C8: (-9.200,7.443,-56.512)
C2: (-6.203,5.571,-53.949)
C6: (-8.490,4.789,-54.388)
C5: (-8.568,5.928,-55.202)
C4: (-7.488,6.772,-55.327)
P: (-11.755,9.008,-59.262)
C4': (-7.965,9.777,-58.792)
C2': (-6.098,8.719,-57.716)
O2': (-5.088,9.691,-57.668)
N1: (-7.239,4.685,-53.779)
N2: (-5.075,5.311,-53.282)
N3: (-6.281,6.650,-54.720)
N7: (-9.636,6.366,-55.940)
N9: (-7.906,7.778,-56.183)
O5': (-10.380,9.671,-58.789)
O3': (-6.027,9.305,-60.105)
OP1: (-6.727,10.519,-62.116)
OP2: (-7.823,8.316,-61.597)
C3': (-3.194,6.930,-63.722)
C1': (-1.972,7.301,-61.704)
C5': (-4.647,8.954,-63.333)
O4': (-2.677,8.480,-62.028)
C8: (-3.972,6.488,-60.395)
O2': (-0.759,6.547,-63.651)
C6: (-2.763,5.018,-57.460)
C5: (-3.092,5.642,-58.677)
C4: (-2.050,6.124,-59.450)
P: (-6.604,9.154,-61.581)
C4': (-3.249,8.386,-63.346)
C2': (-1.978,6.426,-62.952)
C2: (-0.560,5.425,-57.970)
N1: (-1.462,4.915,-57.120)
N3: (-0.749,6.037,-59.156)
N6: (-3.694,4.521,-56.642)
N7: (-4.305,5.876,-59.282)
N9: (-2.628,6.675,-60.563)
O5': (-5.419,8.368,-62.311)
O3': (-3.064,6.837,-65.126)
Image (generated by PyMOL):
PyMOL image
show in jmol