Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1940:A1087
Extra
PDB:
ATOM 1 O3' G A1939 86.458 -78.648 11.150 1.00 34.68 O
ATOM 2 P C A1940 87.613 -77.823 10.372 1.00 44.32 P
ATOM 3 OP1 C A1940 87.380 -76.378 10.659 1.00 48.84 O
ATOM 4 OP2 C A1940 87.651 -78.290 8.944 1.00 33.26 O
ATOM 5 O5' C A1940 88.989 -78.299 11.041 1.00 46.65 O
ATOM 6 C5' C A1940 89.202 -78.298 12.468 1.00 45.75 C
ATOM 7 C4' C A1940 90.487 -79.044 12.828 1.00 44.83 C
ATOM 8 O4' C A1940 90.405 -80.401 12.342 1.00 43.83 O
ATOM 9 C3' C A1940 91.779 -78.522 12.214 1.00 47.39 C
ATOM 10 O3' C A1940 92.350 -77.534 13.039 1.00 47.29 O
ATOM 11 C2' C A1940 92.695 -79.734 12.189 1.00 47.04 C
ATOM 12 O2' C A1940 93.398 -79.877 13.403 1.00 48.66 O
ATOM 13 C1' C A1940 91.698 -80.876 12.029 1.00 43.48 C
ATOM 14 N1 C A1940 91.647 -81.552 10.720 1.00 43.47 N
ATOM 15 C2 C A1940 92.399 -82.720 10.537 1.00 47.28 C
ATOM 16 O2 C A1940 93.150 -83.095 11.436 1.00 52.20 O
ATOM 17 N3 C A1940 92.290 -83.412 9.382 1.00 49.57 N
ATOM 18 C4 C A1940 91.472 -82.976 8.424 1.00 54.79 C
ATOM 19 N4 C A1940 91.343 -83.732 7.314 1.00 55.61 N
ATOM 20 C5 C A1940 90.733 -81.759 8.560 1.00 51.86 C
ATOM 21 C6 C A1940 90.850 -81.085 9.714 1.00 47.08 C
ATOM 22 P C A1941 93.244 -76.393 12.377 1.00 45.06 P
ATOM 23 OP1 C A1941 93.689 -75.543 13.513 1.00 44.63 O
ATOM 24 OP2 C A1941 92.479 -75.784 11.249 1.00 36.91 O
ATOM 25 O5' C A1941 94.506 -77.180 11.788 1.00 43.85 O
TER
ATOM 1 O3' G B1086 94.597 -77.304 18.939 1.00 47.19 O
ATOM 2 P A B1087 95.749 -76.189 19.018 1.00 55.97 P
ATOM 3 OP1 A B1087 95.913 -75.867 20.461 1.00 57.49 O
ATOM 4 OP2 A B1087 95.489 -75.108 18.026 1.00 52.40 O
ATOM 5 O5' A B1087 97.076 -76.949 18.564 1.00 53.11 O
ATOM 6 C5' A B1087 97.008 -78.145 17.800 1.00 53.36 C
ATOM 7 C4' A B1087 97.566 -79.306 18.593 1.00 57.06 C
ATOM 8 O4' A B1087 96.536 -80.310 18.742 1.00 56.00 O
ATOM 9 C3' A B1087 98.765 -79.983 17.947 1.00 52.90 C
ATOM 10 O3' A B1087 99.898 -79.584 18.706 1.00 57.11 O
ATOM 11 C2' A B1087 98.540 -81.462 18.227 1.00 52.49 C
ATOM 12 O2' A B1087 99.059 -81.821 19.482 1.00 55.04 O
ATOM 13 C1' A B1087 97.016 -81.553 18.303 1.00 50.01 C
ATOM 14 N9 A B1087 96.354 -81.845 17.035 1.00 51.17 N
ATOM 15 C8 A B1087 95.687 -80.976 16.207 1.00 51.67 C
ATOM 16 N7 A B1087 95.196 -81.539 15.138 1.00 50.99 N
ATOM 17 C5 A B1087 95.568 -82.861 15.266 1.00 48.23 C
ATOM 18 C6 A B1087 95.351 -83.957 14.469 1.00 47.92 C
ATOM 19 N6 A B1087 94.696 -83.887 13.315 1.00 50.81 N
ATOM 20 N1 A B1087 95.834 -85.147 14.880 1.00 49.48 N
ATOM 21 C2 A B1087 96.497 -85.201 16.031 1.00 51.40 C
ATOM 22 N3 A B1087 96.776 -84.227 16.875 1.00 55.33 N
ATOM 23 C4 A B1087 96.275 -83.066 16.428 1.00 52.49 C
ATOM 24 P U B1088 101.254 -79.135 17.977 1.00 59.45 P
ATOM 25 OP1 U B1088 102.155 -78.778 19.096 1.00 57.94 O
ATOM 26 OP2 U B1088 100.960 -78.132 16.916 1.00 50.38 O
ATOM 27 O5' U B1088 101.795 -80.455 17.280 1.00 43.69 O
TER
ATOM 2 P C A1940 87.613 -77.823 10.372 1.00 44.32 P
ATOM 3 OP1 C A1940 87.380 -76.378 10.659 1.00 48.84 O
ATOM 4 OP2 C A1940 87.651 -78.290 8.944 1.00 33.26 O
ATOM 5 O5' C A1940 88.989 -78.299 11.041 1.00 46.65 O
ATOM 6 C5' C A1940 89.202 -78.298 12.468 1.00 45.75 C
ATOM 7 C4' C A1940 90.487 -79.044 12.828 1.00 44.83 C
ATOM 8 O4' C A1940 90.405 -80.401 12.342 1.00 43.83 O
ATOM 9 C3' C A1940 91.779 -78.522 12.214 1.00 47.39 C
ATOM 10 O3' C A1940 92.350 -77.534 13.039 1.00 47.29 O
ATOM 11 C2' C A1940 92.695 -79.734 12.189 1.00 47.04 C
ATOM 12 O2' C A1940 93.398 -79.877 13.403 1.00 48.66 O
ATOM 13 C1' C A1940 91.698 -80.876 12.029 1.00 43.48 C
ATOM 14 N1 C A1940 91.647 -81.552 10.720 1.00 43.47 N
ATOM 15 C2 C A1940 92.399 -82.720 10.537 1.00 47.28 C
ATOM 16 O2 C A1940 93.150 -83.095 11.436 1.00 52.20 O
ATOM 17 N3 C A1940 92.290 -83.412 9.382 1.00 49.57 N
ATOM 18 C4 C A1940 91.472 -82.976 8.424 1.00 54.79 C
ATOM 19 N4 C A1940 91.343 -83.732 7.314 1.00 55.61 N
ATOM 20 C5 C A1940 90.733 -81.759 8.560 1.00 51.86 C
ATOM 21 C6 C A1940 90.850 -81.085 9.714 1.00 47.08 C
ATOM 22 P C A1941 93.244 -76.393 12.377 1.00 45.06 P
ATOM 23 OP1 C A1941 93.689 -75.543 13.513 1.00 44.63 O
ATOM 24 OP2 C A1941 92.479 -75.784 11.249 1.00 36.91 O
ATOM 25 O5' C A1941 94.506 -77.180 11.788 1.00 43.85 O
TER
ATOM 1 O3' G B1086 94.597 -77.304 18.939 1.00 47.19 O
ATOM 2 P A B1087 95.749 -76.189 19.018 1.00 55.97 P
ATOM 3 OP1 A B1087 95.913 -75.867 20.461 1.00 57.49 O
ATOM 4 OP2 A B1087 95.489 -75.108 18.026 1.00 52.40 O
ATOM 5 O5' A B1087 97.076 -76.949 18.564 1.00 53.11 O
ATOM 6 C5' A B1087 97.008 -78.145 17.800 1.00 53.36 C
ATOM 7 C4' A B1087 97.566 -79.306 18.593 1.00 57.06 C
ATOM 8 O4' A B1087 96.536 -80.310 18.742 1.00 56.00 O
ATOM 9 C3' A B1087 98.765 -79.983 17.947 1.00 52.90 C
ATOM 10 O3' A B1087 99.898 -79.584 18.706 1.00 57.11 O
ATOM 11 C2' A B1087 98.540 -81.462 18.227 1.00 52.49 C
ATOM 12 O2' A B1087 99.059 -81.821 19.482 1.00 55.04 O
ATOM 13 C1' A B1087 97.016 -81.553 18.303 1.00 50.01 C
ATOM 14 N9 A B1087 96.354 -81.845 17.035 1.00 51.17 N
ATOM 15 C8 A B1087 95.687 -80.976 16.207 1.00 51.67 C
ATOM 16 N7 A B1087 95.196 -81.539 15.138 1.00 50.99 N
ATOM 17 C5 A B1087 95.568 -82.861 15.266 1.00 48.23 C
ATOM 18 C6 A B1087 95.351 -83.957 14.469 1.00 47.92 C
ATOM 19 N6 A B1087 94.696 -83.887 13.315 1.00 50.81 N
ATOM 20 N1 A B1087 95.834 -85.147 14.880 1.00 49.48 N
ATOM 21 C2 A B1087 96.497 -85.201 16.031 1.00 51.40 C
ATOM 22 N3 A B1087 96.776 -84.227 16.875 1.00 55.33 N
ATOM 23 C4 A B1087 96.275 -83.066 16.428 1.00 52.49 C
ATOM 24 P U B1088 101.254 -79.135 17.977 1.00 59.45 P
ATOM 25 OP1 U B1088 102.155 -78.778 19.096 1.00 57.94 O
ATOM 26 OP2 U B1088 100.960 -78.132 16.916 1.00 50.38 O
ATOM 27 O5' U B1088 101.795 -80.455 17.280 1.00 43.69 O
TER
Atoms:
C2: (92.399,-82.720,10.537)
OP1: (87.380,-76.378,10.659)
OP2: (87.651,-78.290,8.944)
C4: (91.472,-82.976,8.424)
O5': (88.989,-78.299,11.041)
C3': (91.779,-78.522,12.214)
C1': (91.698,-80.876,12.029)
O4': (90.405,-80.401,12.342)
C5': (89.202,-78.298,12.468)
P: (87.613,-77.823,10.372)
O2: (93.150,-83.095,11.436)
C4': (90.487,-79.044,12.828)
C2': (92.695,-79.734,12.189)
O2': (93.398,-79.877,13.403)
N1: (91.647,-81.552,10.720)
N3: (92.290,-83.412,9.382)
N4: (91.343,-83.732,7.314)
C6: (90.850,-81.085,9.714)
C5: (90.733,-81.759,8.560)
O3': (92.350,-77.534,13.039)
OP1: (87.380,-76.378,10.659)
OP2: (87.651,-78.290,8.944)
C4: (91.472,-82.976,8.424)
O5': (88.989,-78.299,11.041)
C3': (91.779,-78.522,12.214)
C1': (91.698,-80.876,12.029)
O4': (90.405,-80.401,12.342)
C5': (89.202,-78.298,12.468)
P: (87.613,-77.823,10.372)
O2: (93.150,-83.095,11.436)
C4': (90.487,-79.044,12.828)
C2': (92.695,-79.734,12.189)
O2': (93.398,-79.877,13.403)
N1: (91.647,-81.552,10.720)
N3: (92.290,-83.412,9.382)
N4: (91.343,-83.732,7.314)
C6: (90.850,-81.085,9.714)
C5: (90.733,-81.759,8.560)
O3': (92.350,-77.534,13.039)
OP1: (95.913,-75.867,20.461)
OP2: (95.489,-75.108,18.026)
C3': (98.765,-79.983,17.947)
C1': (97.016,-81.553,18.303)
C5': (97.008,-78.145,17.800)
O4': (96.536,-80.310,18.742)
C8: (95.687,-80.976,16.207)
O2': (99.059,-81.821,19.482)
C6: (95.351,-83.957,14.469)
C5: (95.568,-82.861,15.266)
C4: (96.275,-83.066,16.428)
P: (95.749,-76.189,19.018)
C4': (97.566,-79.306,18.593)
C2': (98.540,-81.462,18.227)
C2: (96.497,-85.201,16.031)
N1: (95.834,-85.147,14.880)
N3: (96.776,-84.227,16.875)
N6: (94.696,-83.887,13.315)
N7: (95.196,-81.539,15.138)
N9: (96.354,-81.845,17.035)
O5': (97.076,-76.949,18.564)
O3': (99.898,-79.584,18.706)
OP2: (95.489,-75.108,18.026)
C3': (98.765,-79.983,17.947)
C1': (97.016,-81.553,18.303)
C5': (97.008,-78.145,17.800)
O4': (96.536,-80.310,18.742)
C8: (95.687,-80.976,16.207)
O2': (99.059,-81.821,19.482)
C6: (95.351,-83.957,14.469)
C5: (95.568,-82.861,15.266)
C4: (96.275,-83.066,16.428)
P: (95.749,-76.189,19.018)
C4': (97.566,-79.306,18.593)
C2': (98.540,-81.462,18.227)
C2: (96.497,-85.201,16.031)
N1: (95.834,-85.147,14.880)
N3: (96.776,-84.227,16.875)
N6: (94.696,-83.887,13.315)
N7: (95.196,-81.539,15.138)
N9: (96.354,-81.845,17.035)
O5': (97.076,-76.949,18.564)
O3': (99.898,-79.584,18.706)
Image (generated by PyMOL):