Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5609:5610
Extra
PDB:
ATOM 1 O3' G A 608 113.830 -3.485 210.284 1.00 39.74 O
ATOM 2 P G A 609 113.486 -4.635 211.348 1.00 40.51 P
ATOM 3 OP1 G A 609 113.412 -5.911 210.596 1.00 40.80 O
ATOM 4 OP2 G A 609 112.321 -4.191 212.107 1.00 40.49 O
ATOM 5 O5' G A 609 114.768 -4.649 212.284 1.00 40.09 O
ATOM 6 C5' G A 609 115.965 -5.250 211.848 1.00 40.05 C
ATOM 7 C4' G A 609 117.039 -5.042 212.838 1.00 39.65 C
ATOM 8 O4' G A 609 117.120 -3.634 213.148 1.00 39.46 O
ATOM 9 C3' G A 609 116.837 -5.700 214.174 1.00 39.44 C
ATOM 10 O3' G A 609 117.303 -7.024 214.190 1.00 39.49 O
ATOM 11 C2' G A 609 117.675 -4.824 215.091 1.00 39.05 C
ATOM 12 O2' G A 609 119.032 -5.209 215.000 1.00 38.91 O
ATOM 13 C1' G A 609 117.525 -3.442 214.471 1.00 39.10 C
ATOM 14 N9 G A 609 116.481 -2.674 215.158 1.00 39.05 N
ATOM 15 C8 G A 609 115.199 -2.574 214.713 1.00 39.34 C
ATOM 16 N7 G A 609 114.450 -1.923 215.535 1.00 39.24 N
ATOM 17 C5 G A 609 115.244 -1.576 216.572 1.00 38.88 C
ATOM 18 C6 G A 609 114.951 -0.867 217.722 1.00 38.66 C
ATOM 19 O6 G A 609 113.906 -0.379 218.083 1.00 38.73 O
ATOM 20 N1 G A 609 116.046 -0.721 218.536 1.00 38.32 N
ATOM 21 C2 G A 609 117.291 -1.182 218.290 1.00 38.21 C
ATOM 22 N2 G A 609 118.203 -0.898 219.233 1.00 37.88 N
ATOM 23 N3 G A 609 117.576 -1.867 217.193 1.00 38.42 N
ATOM 24 C4 G A 609 116.516 -2.025 216.376 1.00 38.75 C
ATOM 25 P A A 610 116.472 -8.249 213.629 1.00 35.62 P
ATOM 26 OP1 A A 610 117.150 -8.727 212.400 1.00 35.84 O
ATOM 27 OP2 A A 610 115.126 -7.842 213.579 1.00 35.80 O
ATOM 28 O5' A A 610 116.658 -9.319 214.763 1.00 35.46 O
TER
ATOM 1 O3' G B 609 117.303 -7.024 214.190 1.00 39.49 O
ATOM 2 P A B 610 116.472 -8.249 213.629 1.00 35.62 P
ATOM 3 OP1 A B 610 117.150 -8.727 212.400 1.00 35.84 O
ATOM 4 OP2 A B 610 115.126 -7.842 213.579 1.00 35.80 O
ATOM 5 O5' A B 610 116.658 -9.319 214.763 1.00 35.46 O
ATOM 6 C5' A B 610 117.459 -10.484 214.548 1.00 35.51 C
ATOM 7 C4' A B 610 118.267 -10.795 215.760 1.00 35.17 C
ATOM 8 O4' A B 610 118.987 -9.619 216.131 1.00 34.87 O
ATOM 9 C3' A B 610 117.493 -11.170 217.001 1.00 35.08 C
ATOM 10 O3' A B 610 117.147 -12.553 216.993 1.00 35.29 O
ATOM 11 C2' A B 610 118.461 -10.793 218.109 1.00 34.67 C
ATOM 12 O2' A B 610 119.408 -11.827 218.317 1.00 34.62 O
ATOM 13 C1' A B 610 119.185 -9.583 217.503 1.00 34.56 C
ATOM 14 N9 A B 610 118.667 -8.283 217.991 1.00 34.41 N
ATOM 15 C8 A B 610 117.499 -7.706 217.552 1.00 34.60 C
ATOM 16 N7 A B 610 117.280 -6.543 218.093 1.00 34.42 N
ATOM 17 C5 A B 610 118.359 -6.337 218.943 1.00 34.09 C
ATOM 18 C6 A B 610 118.665 -5.265 219.794 1.00 33.79 C
ATOM 19 N6 A B 610 117.850 -4.217 219.925 1.00 33.80 N
ATOM 20 N1 A B 610 119.810 -5.352 220.510 1.00 33.51 N
ATOM 21 C2 A B 610 120.575 -6.433 220.336 1.00 33.53 C
ATOM 22 N3 A B 610 120.403 -7.492 219.540 1.00 33.80 N
ATOM 23 C4 A B 610 119.244 -7.387 218.871 1.00 34.07 C
ATOM 24 P G B 611 115.979 -13.190 217.934 1.00 37.23 P
ATOM 25 OP1 G B 611 114.722 -13.219 217.133 1.00 37.59 O
ATOM 26 OP2 G B 611 115.997 -12.479 219.237 1.00 36.89 O
ATOM 27 O5' G B 611 116.503 -14.677 218.111 1.00 37.31 O
TER
ATOM 2 P G A 609 113.486 -4.635 211.348 1.00 40.51 P
ATOM 3 OP1 G A 609 113.412 -5.911 210.596 1.00 40.80 O
ATOM 4 OP2 G A 609 112.321 -4.191 212.107 1.00 40.49 O
ATOM 5 O5' G A 609 114.768 -4.649 212.284 1.00 40.09 O
ATOM 6 C5' G A 609 115.965 -5.250 211.848 1.00 40.05 C
ATOM 7 C4' G A 609 117.039 -5.042 212.838 1.00 39.65 C
ATOM 8 O4' G A 609 117.120 -3.634 213.148 1.00 39.46 O
ATOM 9 C3' G A 609 116.837 -5.700 214.174 1.00 39.44 C
ATOM 10 O3' G A 609 117.303 -7.024 214.190 1.00 39.49 O
ATOM 11 C2' G A 609 117.675 -4.824 215.091 1.00 39.05 C
ATOM 12 O2' G A 609 119.032 -5.209 215.000 1.00 38.91 O
ATOM 13 C1' G A 609 117.525 -3.442 214.471 1.00 39.10 C
ATOM 14 N9 G A 609 116.481 -2.674 215.158 1.00 39.05 N
ATOM 15 C8 G A 609 115.199 -2.574 214.713 1.00 39.34 C
ATOM 16 N7 G A 609 114.450 -1.923 215.535 1.00 39.24 N
ATOM 17 C5 G A 609 115.244 -1.576 216.572 1.00 38.88 C
ATOM 18 C6 G A 609 114.951 -0.867 217.722 1.00 38.66 C
ATOM 19 O6 G A 609 113.906 -0.379 218.083 1.00 38.73 O
ATOM 20 N1 G A 609 116.046 -0.721 218.536 1.00 38.32 N
ATOM 21 C2 G A 609 117.291 -1.182 218.290 1.00 38.21 C
ATOM 22 N2 G A 609 118.203 -0.898 219.233 1.00 37.88 N
ATOM 23 N3 G A 609 117.576 -1.867 217.193 1.00 38.42 N
ATOM 24 C4 G A 609 116.516 -2.025 216.376 1.00 38.75 C
ATOM 25 P A A 610 116.472 -8.249 213.629 1.00 35.62 P
ATOM 26 OP1 A A 610 117.150 -8.727 212.400 1.00 35.84 O
ATOM 27 OP2 A A 610 115.126 -7.842 213.579 1.00 35.80 O
ATOM 28 O5' A A 610 116.658 -9.319 214.763 1.00 35.46 O
TER
ATOM 1 O3' G B 609 117.303 -7.024 214.190 1.00 39.49 O
ATOM 2 P A B 610 116.472 -8.249 213.629 1.00 35.62 P
ATOM 3 OP1 A B 610 117.150 -8.727 212.400 1.00 35.84 O
ATOM 4 OP2 A B 610 115.126 -7.842 213.579 1.00 35.80 O
ATOM 5 O5' A B 610 116.658 -9.319 214.763 1.00 35.46 O
ATOM 6 C5' A B 610 117.459 -10.484 214.548 1.00 35.51 C
ATOM 7 C4' A B 610 118.267 -10.795 215.760 1.00 35.17 C
ATOM 8 O4' A B 610 118.987 -9.619 216.131 1.00 34.87 O
ATOM 9 C3' A B 610 117.493 -11.170 217.001 1.00 35.08 C
ATOM 10 O3' A B 610 117.147 -12.553 216.993 1.00 35.29 O
ATOM 11 C2' A B 610 118.461 -10.793 218.109 1.00 34.67 C
ATOM 12 O2' A B 610 119.408 -11.827 218.317 1.00 34.62 O
ATOM 13 C1' A B 610 119.185 -9.583 217.503 1.00 34.56 C
ATOM 14 N9 A B 610 118.667 -8.283 217.991 1.00 34.41 N
ATOM 15 C8 A B 610 117.499 -7.706 217.552 1.00 34.60 C
ATOM 16 N7 A B 610 117.280 -6.543 218.093 1.00 34.42 N
ATOM 17 C5 A B 610 118.359 -6.337 218.943 1.00 34.09 C
ATOM 18 C6 A B 610 118.665 -5.265 219.794 1.00 33.79 C
ATOM 19 N6 A B 610 117.850 -4.217 219.925 1.00 33.80 N
ATOM 20 N1 A B 610 119.810 -5.352 220.510 1.00 33.51 N
ATOM 21 C2 A B 610 120.575 -6.433 220.336 1.00 33.53 C
ATOM 22 N3 A B 610 120.403 -7.492 219.540 1.00 33.80 N
ATOM 23 C4 A B 610 119.244 -7.387 218.871 1.00 34.07 C
ATOM 24 P G B 611 115.979 -13.190 217.934 1.00 37.23 P
ATOM 25 OP1 G B 611 114.722 -13.219 217.133 1.00 37.59 O
ATOM 26 OP2 G B 611 115.997 -12.479 219.237 1.00 36.89 O
ATOM 27 O5' G B 611 116.503 -14.677 218.111 1.00 37.31 O
TER
Atoms:
OP1: (113.412,-5.911,210.596)
OP2: (112.321,-4.191,212.107)
C3': (116.837,-5.700,214.174)
C1': (117.525,-3.442,214.471)
C5': (115.965,-5.250,211.848)
O6: (113.906,-0.379,218.083)
O4': (117.120,-3.634,213.148)
C8: (115.199,-2.574,214.713)
C2: (117.291,-1.182,218.290)
C6: (114.951,-0.867,217.722)
C5: (115.244,-1.576,216.572)
C4: (116.516,-2.025,216.376)
P: (113.486,-4.635,211.348)
C4': (117.039,-5.042,212.838)
C2': (117.675,-4.824,215.091)
O2': (119.032,-5.209,215.000)
N1: (116.046,-0.721,218.536)
N2: (118.203,-0.898,219.233)
N3: (117.576,-1.867,217.193)
N7: (114.450,-1.923,215.535)
N9: (116.481,-2.674,215.158)
O5': (114.768,-4.649,212.284)
O3': (117.303,-7.024,214.190)
OP2: (112.321,-4.191,212.107)
C3': (116.837,-5.700,214.174)
C1': (117.525,-3.442,214.471)
C5': (115.965,-5.250,211.848)
O6: (113.906,-0.379,218.083)
O4': (117.120,-3.634,213.148)
C8: (115.199,-2.574,214.713)
C2: (117.291,-1.182,218.290)
C6: (114.951,-0.867,217.722)
C5: (115.244,-1.576,216.572)
C4: (116.516,-2.025,216.376)
P: (113.486,-4.635,211.348)
C4': (117.039,-5.042,212.838)
C2': (117.675,-4.824,215.091)
O2': (119.032,-5.209,215.000)
N1: (116.046,-0.721,218.536)
N2: (118.203,-0.898,219.233)
N3: (117.576,-1.867,217.193)
N7: (114.450,-1.923,215.535)
N9: (116.481,-2.674,215.158)
O5': (114.768,-4.649,212.284)
O3': (117.303,-7.024,214.190)
OP1: (117.150,-8.727,212.400)
OP2: (115.126,-7.842,213.579)
C3': (117.493,-11.170,217.001)
C1': (119.185,-9.583,217.503)
C5': (117.459,-10.484,214.548)
O4': (118.987,-9.619,216.131)
C8: (117.499,-7.706,217.552)
O2': (119.408,-11.827,218.317)
C6: (118.665,-5.265,219.794)
C5: (118.359,-6.337,218.943)
C4: (119.244,-7.387,218.871)
P: (116.472,-8.249,213.629)
C4': (118.267,-10.795,215.760)
C2': (118.461,-10.793,218.109)
C2: (120.575,-6.433,220.336)
N1: (119.810,-5.352,220.510)
N3: (120.403,-7.492,219.540)
N6: (117.850,-4.217,219.925)
N7: (117.280,-6.543,218.093)
N9: (118.667,-8.283,217.991)
O5': (116.658,-9.319,214.763)
O3': (117.147,-12.553,216.993)
OP2: (115.126,-7.842,213.579)
C3': (117.493,-11.170,217.001)
C1': (119.185,-9.583,217.503)
C5': (117.459,-10.484,214.548)
O4': (118.987,-9.619,216.131)
C8: (117.499,-7.706,217.552)
O2': (119.408,-11.827,218.317)
C6: (118.665,-5.265,219.794)
C5: (118.359,-6.337,218.943)
C4: (119.244,-7.387,218.871)
P: (116.472,-8.249,213.629)
C4': (118.267,-10.795,215.760)
C2': (118.461,-10.793,218.109)
C2: (120.575,-6.433,220.336)
N1: (119.810,-5.352,220.510)
N3: (120.403,-7.492,219.540)
N6: (117.850,-4.217,219.925)
N7: (117.280,-6.543,218.093)
N9: (118.667,-8.283,217.991)
O5': (116.658,-9.319,214.763)
O3': (117.147,-12.553,216.993)
Image (generated by PyMOL):