Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1352:A1541
Extra
PDB:
ATOM 1 O3' U A1351 7.513 -47.445 -24.436 1.00 56.38 O
ATOM 2 P U A1352 6.708 -48.809 -24.732 1.00 56.10 P
ATOM 3 OP1 U A1352 5.360 -48.429 -25.227 1.00 56.44 O
ATOM 4 OP2 U A1352 6.830 -49.727 -23.559 1.00 46.96 O
ATOM 5 O5' U A1352 7.505 -49.475 -25.938 1.00 52.14 O
ATOM 6 C5' U A1352 7.305 -49.027 -27.280 1.00 50.51 C
ATOM 7 C4' U A1352 7.769 -50.055 -28.265 1.00 47.81 C
ATOM 8 O4' U A1352 9.214 -50.101 -28.259 1.00 52.77 O
ATOM 9 C3' U A1352 7.276 -51.477 -28.048 1.00 44.35 C
ATOM 10 O3' U A1352 6.926 -52.007 -29.313 1.00 40.35 O
ATOM 11 C2' U A1352 8.493 -52.197 -27.477 1.00 48.70 C
ATOM 12 O2' U A1352 8.592 -53.560 -27.839 1.00 56.60 O
ATOM 13 C1' U A1352 9.645 -51.445 -28.133 1.00 56.28 C
ATOM 14 N1 U A1352 10.889 -51.510 -27.340 1.00 55.75 N
ATOM 15 C2 U A1352 11.947 -52.317 -27.801 1.00 55.28 C
ATOM 16 O2 U A1352 11.895 -52.976 -28.830 1.00 52.18 O
ATOM 17 N3 U A1352 13.062 -52.316 -27.004 1.00 58.87 N
ATOM 18 C4 U A1352 13.236 -51.615 -25.818 1.00 60.48 C
ATOM 19 O4 U A1352 14.315 -51.678 -25.216 1.00 61.23 O
ATOM 20 C5 U A1352 12.114 -50.827 -25.415 1.00 57.86 C
ATOM 21 C6 U A1352 11.013 -50.801 -26.165 1.00 56.21 C
ATOM 22 P C A1353 5.372 -52.070 -29.744 1.00 46.26 P
ATOM 23 OP1 C A1353 5.241 -52.229 -31.215 1.00 40.30 O
ATOM 24 OP2 C A1353 4.702 -50.923 -29.064 1.00 52.56 O
ATOM 25 O5' C A1353 4.810 -53.425 -29.121 1.00 43.65 O
TER
ATOM 1 O3' G B1540 21.677 -53.644 -31.147 1.00 37.64 O
ATOM 2 P U B1541 21.208 -55.112 -30.705 1.00 36.65 P
ATOM 3 OP1 U B1541 22.407 -55.797 -30.146 1.00 45.42 O
ATOM 4 OP2 U B1541 20.538 -55.701 -31.885 1.00 30.86 O
ATOM 5 O5' U B1541 20.147 -54.844 -29.526 1.00 37.75 O
ATOM 6 C5' U B1541 20.518 -54.166 -28.299 1.00 38.89 C
ATOM 7 C4' U B1541 19.300 -53.540 -27.652 1.00 44.78 C
ATOM 8 O4' U B1541 18.750 -52.600 -28.597 1.00 49.81 O
ATOM 9 C3' U B1541 18.168 -54.526 -27.392 1.00 48.53 C
ATOM 10 O3' U B1541 18.073 -55.128 -26.084 1.00 50.37 O
ATOM 11 C2' U B1541 16.891 -53.706 -27.570 1.00 52.16 C
ATOM 12 O2' U B1541 16.297 -53.241 -26.385 1.00 56.09 O
ATOM 13 C1' U B1541 17.358 -52.528 -28.413 1.00 49.53 C
ATOM 14 N1 U B1541 16.665 -52.462 -29.704 1.00 51.53 N
ATOM 15 C2 U B1541 15.463 -51.804 -29.691 1.00 52.19 C
ATOM 16 O2 U B1541 15.030 -51.267 -28.688 1.00 58.18 O
ATOM 17 N3 U B1541 14.789 -51.777 -30.883 1.00 50.70 N
ATOM 18 C4 U B1541 15.205 -52.313 -32.082 1.00 54.74 C
ATOM 19 O4 U B1541 14.468 -52.223 -33.083 1.00 42.45 O
ATOM 20 C5 U B1541 16.492 -52.968 -32.023 1.00 58.27 C
ATOM 21 C6 U B1541 17.157 -53.022 -30.860 1.00 50.41 C
ATOM 22 P A B1542 19.019 -54.676 -24.843 1.00 48.64 P
ATOM 23 OP1 A B1542 18.300 -53.719 -23.968 1.00 45.44 O
ATOM 24 OP2 A B1542 20.405 -54.390 -25.274 1.00 43.85 O
ATOM 25 O5' A B1542 19.044 -56.039 -24.041 1.00 46.98 O
TER
ATOM 2 P U A1352 6.708 -48.809 -24.732 1.00 56.10 P
ATOM 3 OP1 U A1352 5.360 -48.429 -25.227 1.00 56.44 O
ATOM 4 OP2 U A1352 6.830 -49.727 -23.559 1.00 46.96 O
ATOM 5 O5' U A1352 7.505 -49.475 -25.938 1.00 52.14 O
ATOM 6 C5' U A1352 7.305 -49.027 -27.280 1.00 50.51 C
ATOM 7 C4' U A1352 7.769 -50.055 -28.265 1.00 47.81 C
ATOM 8 O4' U A1352 9.214 -50.101 -28.259 1.00 52.77 O
ATOM 9 C3' U A1352 7.276 -51.477 -28.048 1.00 44.35 C
ATOM 10 O3' U A1352 6.926 -52.007 -29.313 1.00 40.35 O
ATOM 11 C2' U A1352 8.493 -52.197 -27.477 1.00 48.70 C
ATOM 12 O2' U A1352 8.592 -53.560 -27.839 1.00 56.60 O
ATOM 13 C1' U A1352 9.645 -51.445 -28.133 1.00 56.28 C
ATOM 14 N1 U A1352 10.889 -51.510 -27.340 1.00 55.75 N
ATOM 15 C2 U A1352 11.947 -52.317 -27.801 1.00 55.28 C
ATOM 16 O2 U A1352 11.895 -52.976 -28.830 1.00 52.18 O
ATOM 17 N3 U A1352 13.062 -52.316 -27.004 1.00 58.87 N
ATOM 18 C4 U A1352 13.236 -51.615 -25.818 1.00 60.48 C
ATOM 19 O4 U A1352 14.315 -51.678 -25.216 1.00 61.23 O
ATOM 20 C5 U A1352 12.114 -50.827 -25.415 1.00 57.86 C
ATOM 21 C6 U A1352 11.013 -50.801 -26.165 1.00 56.21 C
ATOM 22 P C A1353 5.372 -52.070 -29.744 1.00 46.26 P
ATOM 23 OP1 C A1353 5.241 -52.229 -31.215 1.00 40.30 O
ATOM 24 OP2 C A1353 4.702 -50.923 -29.064 1.00 52.56 O
ATOM 25 O5' C A1353 4.810 -53.425 -29.121 1.00 43.65 O
TER
ATOM 1 O3' G B1540 21.677 -53.644 -31.147 1.00 37.64 O
ATOM 2 P U B1541 21.208 -55.112 -30.705 1.00 36.65 P
ATOM 3 OP1 U B1541 22.407 -55.797 -30.146 1.00 45.42 O
ATOM 4 OP2 U B1541 20.538 -55.701 -31.885 1.00 30.86 O
ATOM 5 O5' U B1541 20.147 -54.844 -29.526 1.00 37.75 O
ATOM 6 C5' U B1541 20.518 -54.166 -28.299 1.00 38.89 C
ATOM 7 C4' U B1541 19.300 -53.540 -27.652 1.00 44.78 C
ATOM 8 O4' U B1541 18.750 -52.600 -28.597 1.00 49.81 O
ATOM 9 C3' U B1541 18.168 -54.526 -27.392 1.00 48.53 C
ATOM 10 O3' U B1541 18.073 -55.128 -26.084 1.00 50.37 O
ATOM 11 C2' U B1541 16.891 -53.706 -27.570 1.00 52.16 C
ATOM 12 O2' U B1541 16.297 -53.241 -26.385 1.00 56.09 O
ATOM 13 C1' U B1541 17.358 -52.528 -28.413 1.00 49.53 C
ATOM 14 N1 U B1541 16.665 -52.462 -29.704 1.00 51.53 N
ATOM 15 C2 U B1541 15.463 -51.804 -29.691 1.00 52.19 C
ATOM 16 O2 U B1541 15.030 -51.267 -28.688 1.00 58.18 O
ATOM 17 N3 U B1541 14.789 -51.777 -30.883 1.00 50.70 N
ATOM 18 C4 U B1541 15.205 -52.313 -32.082 1.00 54.74 C
ATOM 19 O4 U B1541 14.468 -52.223 -33.083 1.00 42.45 O
ATOM 20 C5 U B1541 16.492 -52.968 -32.023 1.00 58.27 C
ATOM 21 C6 U B1541 17.157 -53.022 -30.860 1.00 50.41 C
ATOM 22 P A B1542 19.019 -54.676 -24.843 1.00 48.64 P
ATOM 23 OP1 A B1542 18.300 -53.719 -23.968 1.00 45.44 O
ATOM 24 OP2 A B1542 20.405 -54.390 -25.274 1.00 43.85 O
ATOM 25 O5' A B1542 19.044 -56.039 -24.041 1.00 46.98 O
TER
Atoms:
C4: (13.236,-51.615,-25.818)
N3: (13.062,-52.316,-27.004)
OP1: (5.360,-48.429,-25.227)
OP2: (6.830,-49.727,-23.559)
C2: (11.947,-52.317,-27.801)
C1': (9.645,-51.445,-28.133)
C3': (7.276,-51.477,-28.048)
O5': (7.505,-49.475,-25.938)
O4': (9.214,-50.101,-28.259)
C5': (7.305,-49.027,-27.280)
P: (6.708,-48.809,-24.732)
C4': (7.769,-50.055,-28.265)
C2': (8.493,-52.197,-27.477)
O2': (8.592,-53.560,-27.839)
N1: (10.889,-51.510,-27.340)
O4: (14.315,-51.678,-25.216)
O2: (11.895,-52.976,-28.830)
C6: (11.013,-50.801,-26.165)
C5: (12.114,-50.827,-25.415)
O3': (6.926,-52.007,-29.313)
N3: (13.062,-52.316,-27.004)
OP1: (5.360,-48.429,-25.227)
OP2: (6.830,-49.727,-23.559)
C2: (11.947,-52.317,-27.801)
C1': (9.645,-51.445,-28.133)
C3': (7.276,-51.477,-28.048)
O5': (7.505,-49.475,-25.938)
O4': (9.214,-50.101,-28.259)
C5': (7.305,-49.027,-27.280)
P: (6.708,-48.809,-24.732)
C4': (7.769,-50.055,-28.265)
C2': (8.493,-52.197,-27.477)
O2': (8.592,-53.560,-27.839)
N1: (10.889,-51.510,-27.340)
O4: (14.315,-51.678,-25.216)
O2: (11.895,-52.976,-28.830)
C6: (11.013,-50.801,-26.165)
C5: (12.114,-50.827,-25.415)
O3': (6.926,-52.007,-29.313)
C4: (15.205,-52.313,-32.082)
N3: (14.789,-51.777,-30.883)
OP1: (22.407,-55.797,-30.146)
OP2: (20.538,-55.701,-31.885)
C2: (15.463,-51.804,-29.691)
C1': (17.358,-52.528,-28.413)
C3': (18.168,-54.526,-27.392)
O5': (20.147,-54.844,-29.526)
O4': (18.750,-52.600,-28.597)
C5': (20.518,-54.166,-28.299)
P: (21.208,-55.112,-30.705)
C4': (19.300,-53.540,-27.652)
C2': (16.891,-53.706,-27.570)
O2': (16.297,-53.241,-26.385)
N1: (16.665,-52.462,-29.704)
O4: (14.468,-52.223,-33.083)
O2: (15.030,-51.267,-28.688)
C6: (17.157,-53.022,-30.860)
C5: (16.492,-52.968,-32.023)
O3': (18.073,-55.128,-26.084)
N3: (14.789,-51.777,-30.883)
OP1: (22.407,-55.797,-30.146)
OP2: (20.538,-55.701,-31.885)
C2: (15.463,-51.804,-29.691)
C1': (17.358,-52.528,-28.413)
C3': (18.168,-54.526,-27.392)
O5': (20.147,-54.844,-29.526)
O4': (18.750,-52.600,-28.597)
C5': (20.518,-54.166,-28.299)
P: (21.208,-55.112,-30.705)
C4': (19.300,-53.540,-27.652)
C2': (16.891,-53.706,-27.570)
O2': (16.297,-53.241,-26.385)
N1: (16.665,-52.462,-29.704)
O4: (14.468,-52.223,-33.083)
O2: (15.030,-51.267,-28.688)
C6: (17.157,-53.022,-30.860)
C5: (16.492,-52.968,-32.023)
O3': (18.073,-55.128,-26.084)
Image (generated by PyMOL):