Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12717:12224
Extra
PDB:
ATOM 1 O3' G A2716 4.684 -18.251 80.461 1.00 48.77 O
ATOM 2 P U A2717 3.430 -18.733 81.355 1.00 43.36 P
ATOM 3 OP1 U A2717 3.653 -20.176 81.697 1.00 43.42 O
ATOM 4 OP2 U A2717 2.177 -18.344 80.635 1.00 43.51 O
ATOM 5 O5' U A2717 3.605 -17.836 82.654 1.00 43.39 O
ATOM 6 C5' U A2717 2.678 -17.899 83.711 1.00 43.63 C
ATOM 7 C4' U A2717 3.360 -17.890 85.053 1.00 43.64 C
ATOM 8 O4' U A2717 4.119 -19.100 85.223 1.00 43.58 O
ATOM 9 C3' U A2717 4.365 -16.787 85.307 1.00 43.46 C
ATOM 10 O3' U A2717 3.756 -15.578 85.665 1.00 43.56 O
ATOM 11 C2' U A2717 5.196 -17.369 86.430 1.00 43.46 C
ATOM 12 O2' U A2717 4.521 -17.219 87.657 1.00 43.69 O
ATOM 13 C1' U A2717 5.209 -18.855 86.072 1.00 43.48 C
ATOM 14 N1 U A2717 6.421 -19.222 85.361 1.00 43.25 N
ATOM 15 C2 U A2717 7.560 -19.474 86.108 1.00 43.17 C
ATOM 16 O2 U A2717 7.598 -19.419 87.323 1.00 43.29 O
ATOM 17 N3 U A2717 8.649 -19.791 85.361 1.00 42.96 N
ATOM 18 C4 U A2717 8.641 -19.877 84.000 1.00 42.84 C
ATOM 19 O4 U A2717 9.669 -20.186 83.445 1.00 42.67 O
ATOM 20 C5 U A2717 7.428 -19.605 83.322 1.00 42.94 C
ATOM 21 C6 U A2717 6.366 -19.291 84.002 1.00 43.14 C
ATOM 22 P G A2718 4.187 -14.219 84.954 1.00 39.06 P
ATOM 23 OP1 G A2718 3.272 -13.173 85.444 1.00 39.25 O
ATOM 24 OP2 G A2718 4.258 -14.483 83.510 1.00 38.93 O
ATOM 25 O5' G A2718 5.624 -13.961 85.521 1.00 38.89 O
TER
ATOM 1 O3' U B2223 12.047 -14.962 90.048 1.00 39.17 O
ATOM 2 P U B2224 11.716 -16.070 91.102 1.00 36.85 P
ATOM 3 OP1 U B2224 10.384 -15.787 91.625 1.00 37.08 O
ATOM 4 OP2 U B2224 12.831 -16.092 92.047 1.00 36.85 O
ATOM 5 O5' U B2224 11.652 -17.407 90.216 1.00 36.78 O
ATOM 6 C5' U B2224 10.547 -17.663 89.358 1.00 36.82 C
ATOM 7 C4' U B2224 10.805 -18.814 88.427 1.00 36.72 C
ATOM 8 O4' U B2224 12.048 -18.593 87.735 1.00 36.48 O
ATOM 9 C3' U B2224 10.968 -20.207 89.047 1.00 36.84 C
ATOM 10 O3' U B2224 9.746 -20.856 89.308 1.00 37.06 O
ATOM 11 C2' U B2224 11.795 -20.938 87.997 1.00 36.66 C
ATOM 12 O2' U B2224 10.983 -21.395 86.899 1.00 36.66 O
ATOM 13 C1' U B2224 12.702 -19.823 87.511 1.00 36.43 C
ATOM 14 N1 U B2224 13.984 -19.807 88.223 1.00 36.37 N
ATOM 15 C2 U B2224 14.941 -20.675 87.754 1.00 36.26 C
ATOM 16 O2 U B2224 14.657 -21.416 86.834 1.00 36.23 O
ATOM 17 N3 U B2224 16.199 -20.676 88.366 1.00 36.20 N
ATOM 18 C4 U B2224 16.526 -19.854 89.400 1.00 36.25 C
ATOM 19 O4 U B2224 17.629 -19.921 89.869 1.00 36.21 O
ATOM 20 C5 U B2224 15.475 -18.956 89.841 1.00 36.37 C
ATOM 21 C6 U B2224 14.266 -18.963 89.258 1.00 36.42 C
ATOM 22 P G B2225 9.535 -21.688 90.651 1.00 62.48 P
ATOM 23 OP1 G B2225 8.154 -21.451 91.069 1.00 62.70 O
ATOM 24 OP2 G B2225 10.615 -21.335 91.563 1.00 62.44 O
ATOM 25 O5' G B2225 9.701 -23.187 90.225 1.00 62.50 O
TER
ATOM 2 P U A2717 3.430 -18.733 81.355 1.00 43.36 P
ATOM 3 OP1 U A2717 3.653 -20.176 81.697 1.00 43.42 O
ATOM 4 OP2 U A2717 2.177 -18.344 80.635 1.00 43.51 O
ATOM 5 O5' U A2717 3.605 -17.836 82.654 1.00 43.39 O
ATOM 6 C5' U A2717 2.678 -17.899 83.711 1.00 43.63 C
ATOM 7 C4' U A2717 3.360 -17.890 85.053 1.00 43.64 C
ATOM 8 O4' U A2717 4.119 -19.100 85.223 1.00 43.58 O
ATOM 9 C3' U A2717 4.365 -16.787 85.307 1.00 43.46 C
ATOM 10 O3' U A2717 3.756 -15.578 85.665 1.00 43.56 O
ATOM 11 C2' U A2717 5.196 -17.369 86.430 1.00 43.46 C
ATOM 12 O2' U A2717 4.521 -17.219 87.657 1.00 43.69 O
ATOM 13 C1' U A2717 5.209 -18.855 86.072 1.00 43.48 C
ATOM 14 N1 U A2717 6.421 -19.222 85.361 1.00 43.25 N
ATOM 15 C2 U A2717 7.560 -19.474 86.108 1.00 43.17 C
ATOM 16 O2 U A2717 7.598 -19.419 87.323 1.00 43.29 O
ATOM 17 N3 U A2717 8.649 -19.791 85.361 1.00 42.96 N
ATOM 18 C4 U A2717 8.641 -19.877 84.000 1.00 42.84 C
ATOM 19 O4 U A2717 9.669 -20.186 83.445 1.00 42.67 O
ATOM 20 C5 U A2717 7.428 -19.605 83.322 1.00 42.94 C
ATOM 21 C6 U A2717 6.366 -19.291 84.002 1.00 43.14 C
ATOM 22 P G A2718 4.187 -14.219 84.954 1.00 39.06 P
ATOM 23 OP1 G A2718 3.272 -13.173 85.444 1.00 39.25 O
ATOM 24 OP2 G A2718 4.258 -14.483 83.510 1.00 38.93 O
ATOM 25 O5' G A2718 5.624 -13.961 85.521 1.00 38.89 O
TER
ATOM 1 O3' U B2223 12.047 -14.962 90.048 1.00 39.17 O
ATOM 2 P U B2224 11.716 -16.070 91.102 1.00 36.85 P
ATOM 3 OP1 U B2224 10.384 -15.787 91.625 1.00 37.08 O
ATOM 4 OP2 U B2224 12.831 -16.092 92.047 1.00 36.85 O
ATOM 5 O5' U B2224 11.652 -17.407 90.216 1.00 36.78 O
ATOM 6 C5' U B2224 10.547 -17.663 89.358 1.00 36.82 C
ATOM 7 C4' U B2224 10.805 -18.814 88.427 1.00 36.72 C
ATOM 8 O4' U B2224 12.048 -18.593 87.735 1.00 36.48 O
ATOM 9 C3' U B2224 10.968 -20.207 89.047 1.00 36.84 C
ATOM 10 O3' U B2224 9.746 -20.856 89.308 1.00 37.06 O
ATOM 11 C2' U B2224 11.795 -20.938 87.997 1.00 36.66 C
ATOM 12 O2' U B2224 10.983 -21.395 86.899 1.00 36.66 O
ATOM 13 C1' U B2224 12.702 -19.823 87.511 1.00 36.43 C
ATOM 14 N1 U B2224 13.984 -19.807 88.223 1.00 36.37 N
ATOM 15 C2 U B2224 14.941 -20.675 87.754 1.00 36.26 C
ATOM 16 O2 U B2224 14.657 -21.416 86.834 1.00 36.23 O
ATOM 17 N3 U B2224 16.199 -20.676 88.366 1.00 36.20 N
ATOM 18 C4 U B2224 16.526 -19.854 89.400 1.00 36.25 C
ATOM 19 O4 U B2224 17.629 -19.921 89.869 1.00 36.21 O
ATOM 20 C5 U B2224 15.475 -18.956 89.841 1.00 36.37 C
ATOM 21 C6 U B2224 14.266 -18.963 89.258 1.00 36.42 C
ATOM 22 P G B2225 9.535 -21.688 90.651 1.00 62.48 P
ATOM 23 OP1 G B2225 8.154 -21.451 91.069 1.00 62.70 O
ATOM 24 OP2 G B2225 10.615 -21.335 91.563 1.00 62.44 O
ATOM 25 O5' G B2225 9.701 -23.187 90.225 1.00 62.50 O
TER
Atoms:
C4: (8.641,-19.877,84.000)
N3: (8.649,-19.791,85.361)
OP1: (3.653,-20.176,81.697)
OP2: (2.177,-18.344,80.635)
C2: (7.560,-19.474,86.108)
C1': (5.209,-18.855,86.072)
C3': (4.365,-16.787,85.307)
O5': (3.605,-17.836,82.654)
O4': (4.119,-19.100,85.223)
C5': (2.678,-17.899,83.711)
P: (3.430,-18.733,81.355)
C4': (3.360,-17.890,85.053)
C2': (5.196,-17.369,86.430)
O2': (4.521,-17.219,87.657)
N1: (6.421,-19.222,85.361)
O4: (9.669,-20.186,83.445)
O2: (7.598,-19.419,87.323)
C6: (6.366,-19.291,84.002)
C5: (7.428,-19.605,83.322)
O3': (3.756,-15.578,85.665)
N3: (8.649,-19.791,85.361)
OP1: (3.653,-20.176,81.697)
OP2: (2.177,-18.344,80.635)
C2: (7.560,-19.474,86.108)
C1': (5.209,-18.855,86.072)
C3': (4.365,-16.787,85.307)
O5': (3.605,-17.836,82.654)
O4': (4.119,-19.100,85.223)
C5': (2.678,-17.899,83.711)
P: (3.430,-18.733,81.355)
C4': (3.360,-17.890,85.053)
C2': (5.196,-17.369,86.430)
O2': (4.521,-17.219,87.657)
N1: (6.421,-19.222,85.361)
O4: (9.669,-20.186,83.445)
O2: (7.598,-19.419,87.323)
C6: (6.366,-19.291,84.002)
C5: (7.428,-19.605,83.322)
O3': (3.756,-15.578,85.665)
C4: (16.526,-19.854,89.400)
N3: (16.199,-20.676,88.366)
OP1: (10.384,-15.787,91.625)
OP2: (12.831,-16.092,92.047)
C2: (14.941,-20.675,87.754)
C1': (12.702,-19.823,87.511)
C3': (10.968,-20.207,89.047)
O5': (11.652,-17.407,90.216)
O4': (12.048,-18.593,87.735)
C5': (10.547,-17.663,89.358)
P: (11.716,-16.070,91.102)
C4': (10.805,-18.814,88.427)
C2': (11.795,-20.938,87.997)
O2': (10.983,-21.395,86.899)
N1: (13.984,-19.807,88.223)
O4: (17.629,-19.921,89.869)
O2: (14.657,-21.416,86.834)
C6: (14.266,-18.963,89.258)
C5: (15.475,-18.956,89.841)
O3': (9.746,-20.856,89.308)
N3: (16.199,-20.676,88.366)
OP1: (10.384,-15.787,91.625)
OP2: (12.831,-16.092,92.047)
C2: (14.941,-20.675,87.754)
C1': (12.702,-19.823,87.511)
C3': (10.968,-20.207,89.047)
O5': (11.652,-17.407,90.216)
O4': (12.048,-18.593,87.735)
C5': (10.547,-17.663,89.358)
P: (11.716,-16.070,91.102)
C4': (10.805,-18.814,88.427)
C2': (11.795,-20.938,87.997)
O2': (10.983,-21.395,86.899)
N1: (13.984,-19.807,88.223)
O4: (17.629,-19.921,89.869)
O2: (14.657,-21.416,86.834)
C6: (14.266,-18.963,89.258)
C5: (15.475,-18.956,89.841)
O3': (9.746,-20.856,89.308)
Image (generated by PyMOL):