Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1I9V:A56:A17
Extra
PDB:
ATOM 1 O3' C A 55 22.648 -24.919 -4.830 1.00 25.73 O
ATOM 2 P G A 56 21.430 -24.037 -5.392 1.00 25.90 P
ATOM 3 OP1 G A 56 20.187 -24.787 -5.020 1.00 25.94 O
ATOM 4 OP2 G A 56 21.710 -23.694 -6.814 1.00 22.80 O
ATOM 5 O5' G A 56 21.519 -22.696 -4.538 1.00 25.78 O
ATOM 6 C5' G A 56 21.279 -22.740 -3.161 1.00 25.24 C
ATOM 7 C4' G A 56 21.839 -21.530 -2.485 1.00 25.83 C
ATOM 8 O4' G A 56 23.260 -21.427 -2.768 1.00 26.90 O
ATOM 9 C3' G A 56 21.278 -20.170 -2.860 1.00 26.31 C
ATOM 10 O3' G A 56 20.019 -19.965 -2.195 1.00 28.63 O
ATOM 11 C2' G A 56 22.388 -19.259 -2.321 1.00 25.62 C
ATOM 12 O2' G A 56 22.360 -19.190 -0.911 1.00 24.53 O
ATOM 13 C1' G A 56 23.652 -20.070 -2.655 1.00 24.51 C
ATOM 14 N9 G A 56 24.298 -19.659 -3.899 1.00 21.65 N
ATOM 15 C8 G A 56 24.257 -20.277 -5.123 1.00 18.94 C
ATOM 16 N7 G A 56 24.887 -19.599 -6.057 1.00 19.34 N
ATOM 17 C5 G A 56 25.397 -18.488 -5.392 1.00 17.66 C
ATOM 18 C6 G A 56 26.158 -17.400 -5.866 1.00 16.51 C
ATOM 19 O6 G A 56 26.602 -17.202 -6.998 1.00 17.25 O
ATOM 20 N1 G A 56 26.412 -16.485 -4.867 1.00 14.77 N
ATOM 21 C2 G A 56 26.015 -16.618 -3.563 1.00 17.08 C
ATOM 22 N2 G A 56 26.362 -15.636 -2.720 1.00 19.33 N
ATOM 23 N3 G A 56 25.332 -17.629 -3.104 1.00 15.48 N
ATOM 24 C4 G A 56 25.049 -18.517 -4.063 1.00 18.55 C
ATOM 25 P A A 57 18.800 -19.168 -2.925 1.00 30.99 P
ATOM 26 OP1 A A 57 17.723 -19.034 -1.925 1.00 31.50 O
ATOM 27 OP2 A A 57 18.494 -19.784 -4.223 1.00 31.23 O
ATOM 28 O5' A A 57 19.333 -17.695 -3.224 1.00 28.23 O
TER
ATOM 1 O3' U B 16 28.796 -9.143 -6.691 1.00 58.73 O
ATOM 2 P G B 17 27.410 -8.876 -7.569 1.00 39.78 P
ATOM 3 OP1 G B 17 27.604 -9.243 -8.994 1.00 41.31 O
ATOM 4 OP2 G B 17 27.015 -7.500 -7.210 1.00 39.66 O
ATOM 5 O5' G B 17 26.320 -9.879 -6.983 1.00 35.95 O
ATOM 6 C5' G B 17 25.615 -9.558 -5.793 1.00 30.55 C
ATOM 7 C4' G B 17 25.404 -10.795 -4.967 1.00 27.96 C
ATOM 8 O4' G B 17 24.667 -11.764 -5.770 1.00 26.05 O
ATOM 9 C3' G B 17 26.665 -11.515 -4.493 1.00 26.24 C
ATOM 10 O3' G B 17 26.386 -11.997 -3.193 1.00 27.69 O
ATOM 11 C2' G B 17 26.749 -12.708 -5.445 1.00 23.81 C
ATOM 12 O2' G B 17 27.332 -13.869 -4.884 1.00 24.45 O
ATOM 13 C1' G B 17 25.275 -13.021 -5.625 1.00 21.78 C
ATOM 14 N9 G B 17 24.977 -13.860 -6.779 1.00 16.79 N
ATOM 15 C8 G B 17 25.493 -13.767 -8.047 1.00 12.96 C
ATOM 16 N7 G B 17 25.099 -14.731 -8.827 1.00 10.85 N
ATOM 17 C5 G B 17 24.257 -15.488 -8.028 1.00 12.19 C
ATOM 18 C6 G B 17 23.557 -16.672 -8.317 1.00 14.16 C
ATOM 19 O6 G B 17 23.543 -17.306 -9.374 1.00 15.85 O
ATOM 20 N1 G B 17 22.819 -17.121 -7.222 1.00 14.17 N
ATOM 21 C2 G B 17 22.762 -16.487 -6.016 1.00 14.97 C
ATOM 22 N2 G B 17 21.981 -17.050 -5.094 1.00 14.34 N
ATOM 23 N3 G B 17 23.426 -15.374 -5.732 1.00 13.26 N
ATOM 24 C4 G B 17 24.150 -14.943 -6.776 1.00 13.07 C
ATOM 25 P G B 18 26.887 -11.178 -1.909 1.00 27.25 P
ATOM 26 OP1 G B 18 26.046 -9.949 -1.750 1.00 28.29 O
ATOM 27 OP2 G B 18 28.370 -11.053 -2.002 1.00 25.88 O
ATOM 28 O5' G B 18 26.524 -12.171 -0.722 1.00 26.76 O
TER
ATOM 2 P G A 56 21.430 -24.037 -5.392 1.00 25.90 P
ATOM 3 OP1 G A 56 20.187 -24.787 -5.020 1.00 25.94 O
ATOM 4 OP2 G A 56 21.710 -23.694 -6.814 1.00 22.80 O
ATOM 5 O5' G A 56 21.519 -22.696 -4.538 1.00 25.78 O
ATOM 6 C5' G A 56 21.279 -22.740 -3.161 1.00 25.24 C
ATOM 7 C4' G A 56 21.839 -21.530 -2.485 1.00 25.83 C
ATOM 8 O4' G A 56 23.260 -21.427 -2.768 1.00 26.90 O
ATOM 9 C3' G A 56 21.278 -20.170 -2.860 1.00 26.31 C
ATOM 10 O3' G A 56 20.019 -19.965 -2.195 1.00 28.63 O
ATOM 11 C2' G A 56 22.388 -19.259 -2.321 1.00 25.62 C
ATOM 12 O2' G A 56 22.360 -19.190 -0.911 1.00 24.53 O
ATOM 13 C1' G A 56 23.652 -20.070 -2.655 1.00 24.51 C
ATOM 14 N9 G A 56 24.298 -19.659 -3.899 1.00 21.65 N
ATOM 15 C8 G A 56 24.257 -20.277 -5.123 1.00 18.94 C
ATOM 16 N7 G A 56 24.887 -19.599 -6.057 1.00 19.34 N
ATOM 17 C5 G A 56 25.397 -18.488 -5.392 1.00 17.66 C
ATOM 18 C6 G A 56 26.158 -17.400 -5.866 1.00 16.51 C
ATOM 19 O6 G A 56 26.602 -17.202 -6.998 1.00 17.25 O
ATOM 20 N1 G A 56 26.412 -16.485 -4.867 1.00 14.77 N
ATOM 21 C2 G A 56 26.015 -16.618 -3.563 1.00 17.08 C
ATOM 22 N2 G A 56 26.362 -15.636 -2.720 1.00 19.33 N
ATOM 23 N3 G A 56 25.332 -17.629 -3.104 1.00 15.48 N
ATOM 24 C4 G A 56 25.049 -18.517 -4.063 1.00 18.55 C
ATOM 25 P A A 57 18.800 -19.168 -2.925 1.00 30.99 P
ATOM 26 OP1 A A 57 17.723 -19.034 -1.925 1.00 31.50 O
ATOM 27 OP2 A A 57 18.494 -19.784 -4.223 1.00 31.23 O
ATOM 28 O5' A A 57 19.333 -17.695 -3.224 1.00 28.23 O
TER
ATOM 1 O3' U B 16 28.796 -9.143 -6.691 1.00 58.73 O
ATOM 2 P G B 17 27.410 -8.876 -7.569 1.00 39.78 P
ATOM 3 OP1 G B 17 27.604 -9.243 -8.994 1.00 41.31 O
ATOM 4 OP2 G B 17 27.015 -7.500 -7.210 1.00 39.66 O
ATOM 5 O5' G B 17 26.320 -9.879 -6.983 1.00 35.95 O
ATOM 6 C5' G B 17 25.615 -9.558 -5.793 1.00 30.55 C
ATOM 7 C4' G B 17 25.404 -10.795 -4.967 1.00 27.96 C
ATOM 8 O4' G B 17 24.667 -11.764 -5.770 1.00 26.05 O
ATOM 9 C3' G B 17 26.665 -11.515 -4.493 1.00 26.24 C
ATOM 10 O3' G B 17 26.386 -11.997 -3.193 1.00 27.69 O
ATOM 11 C2' G B 17 26.749 -12.708 -5.445 1.00 23.81 C
ATOM 12 O2' G B 17 27.332 -13.869 -4.884 1.00 24.45 O
ATOM 13 C1' G B 17 25.275 -13.021 -5.625 1.00 21.78 C
ATOM 14 N9 G B 17 24.977 -13.860 -6.779 1.00 16.79 N
ATOM 15 C8 G B 17 25.493 -13.767 -8.047 1.00 12.96 C
ATOM 16 N7 G B 17 25.099 -14.731 -8.827 1.00 10.85 N
ATOM 17 C5 G B 17 24.257 -15.488 -8.028 1.00 12.19 C
ATOM 18 C6 G B 17 23.557 -16.672 -8.317 1.00 14.16 C
ATOM 19 O6 G B 17 23.543 -17.306 -9.374 1.00 15.85 O
ATOM 20 N1 G B 17 22.819 -17.121 -7.222 1.00 14.17 N
ATOM 21 C2 G B 17 22.762 -16.487 -6.016 1.00 14.97 C
ATOM 22 N2 G B 17 21.981 -17.050 -5.094 1.00 14.34 N
ATOM 23 N3 G B 17 23.426 -15.374 -5.732 1.00 13.26 N
ATOM 24 C4 G B 17 24.150 -14.943 -6.776 1.00 13.07 C
ATOM 25 P G B 18 26.887 -11.178 -1.909 1.00 27.25 P
ATOM 26 OP1 G B 18 26.046 -9.949 -1.750 1.00 28.29 O
ATOM 27 OP2 G B 18 28.370 -11.053 -2.002 1.00 25.88 O
ATOM 28 O5' G B 18 26.524 -12.171 -0.722 1.00 26.76 O
TER
Atoms:
OP1: (20.187,-24.787,-5.020)
OP2: (21.710,-23.694,-6.814)
C3': (21.278,-20.170,-2.860)
C1': (23.652,-20.070,-2.655)
C5': (21.279,-22.740,-3.161)
O6: (26.602,-17.202,-6.998)
O4': (23.260,-21.427,-2.768)
C8: (24.257,-20.277,-5.123)
C2: (26.015,-16.618,-3.563)
C6: (26.158,-17.400,-5.866)
C5: (25.397,-18.488,-5.392)
C4: (25.049,-18.517,-4.063)
P: (21.430,-24.037,-5.392)
C4': (21.839,-21.530,-2.485)
C2': (22.388,-19.259,-2.321)
O2': (22.360,-19.190,-0.911)
N1: (26.412,-16.485,-4.867)
N2: (26.362,-15.636,-2.720)
N3: (25.332,-17.629,-3.104)
N7: (24.887,-19.599,-6.057)
N9: (24.298,-19.659,-3.899)
O5': (21.519,-22.696,-4.538)
O3': (20.019,-19.965,-2.195)
OP2: (21.710,-23.694,-6.814)
C3': (21.278,-20.170,-2.860)
C1': (23.652,-20.070,-2.655)
C5': (21.279,-22.740,-3.161)
O6: (26.602,-17.202,-6.998)
O4': (23.260,-21.427,-2.768)
C8: (24.257,-20.277,-5.123)
C2: (26.015,-16.618,-3.563)
C6: (26.158,-17.400,-5.866)
C5: (25.397,-18.488,-5.392)
C4: (25.049,-18.517,-4.063)
P: (21.430,-24.037,-5.392)
C4': (21.839,-21.530,-2.485)
C2': (22.388,-19.259,-2.321)
O2': (22.360,-19.190,-0.911)
N1: (26.412,-16.485,-4.867)
N2: (26.362,-15.636,-2.720)
N3: (25.332,-17.629,-3.104)
N7: (24.887,-19.599,-6.057)
N9: (24.298,-19.659,-3.899)
O5': (21.519,-22.696,-4.538)
O3': (20.019,-19.965,-2.195)
OP1: (27.604,-9.243,-8.994)
OP2: (27.015,-7.500,-7.210)
C3': (26.665,-11.515,-4.493)
C1': (25.275,-13.021,-5.625)
C5': (25.615,-9.558,-5.793)
O6: (23.543,-17.306,-9.374)
O4': (24.667,-11.764,-5.770)
C8: (25.493,-13.767,-8.047)
C2: (22.762,-16.487,-6.016)
C6: (23.557,-16.672,-8.317)
C5: (24.257,-15.488,-8.028)
C4: (24.150,-14.943,-6.776)
P: (27.410,-8.876,-7.569)
C4': (25.404,-10.795,-4.967)
C2': (26.749,-12.708,-5.445)
O2': (27.332,-13.869,-4.884)
N1: (22.819,-17.121,-7.222)
N2: (21.981,-17.050,-5.094)
N3: (23.426,-15.374,-5.732)
N7: (25.099,-14.731,-8.827)
N9: (24.977,-13.860,-6.779)
O5': (26.320,-9.879,-6.983)
O3': (26.386,-11.997,-3.193)
OP2: (27.015,-7.500,-7.210)
C3': (26.665,-11.515,-4.493)
C1': (25.275,-13.021,-5.625)
C5': (25.615,-9.558,-5.793)
O6: (23.543,-17.306,-9.374)
O4': (24.667,-11.764,-5.770)
C8: (25.493,-13.767,-8.047)
C2: (22.762,-16.487,-6.016)
C6: (23.557,-16.672,-8.317)
C5: (24.257,-15.488,-8.028)
C4: (24.150,-14.943,-6.776)
P: (27.410,-8.876,-7.569)
C4': (25.404,-10.795,-4.967)
C2': (26.749,-12.708,-5.445)
O2': (27.332,-13.869,-4.884)
N1: (22.819,-17.121,-7.222)
N2: (21.981,-17.050,-5.094)
N3: (23.426,-15.374,-5.732)
N7: (25.099,-14.731,-8.827)
N9: (24.977,-13.860,-6.779)
O5': (26.320,-9.879,-6.983)
O3': (26.386,-11.997,-3.193)
Image (generated by PyMOL):