Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A2078:A2105
Extra
PDB:
ATOM 1 O3' G A2077 106.752 105.400 33.296 1.00 42.41 O
ATOM 2 P C A2078 108.159 105.805 32.639 1.00 42.31 P
ATOM 3 OP1 C A2078 108.002 105.668 31.165 1.00 41.61 O
ATOM 4 OP2 C A2078 109.224 105.043 33.341 1.00 40.11 O
ATOM 5 O5' C A2078 108.336 107.348 33.004 1.00 40.06 O
ATOM 6 C5' C A2078 107.499 108.352 32.394 1.00 38.82 C
ATOM 7 C4' C A2078 107.668 109.676 33.092 1.00 38.28 C
ATOM 8 O4' C A2078 107.360 109.552 34.503 1.00 38.38 O
ATOM 9 C3' C A2078 109.077 110.229 33.076 1.00 39.19 C
ATOM 10 O3' C A2078 109.266 110.865 31.822 1.00 41.47 O
ATOM 11 C2' C A2078 109.049 111.206 34.250 1.00 38.49 C
ATOM 12 O2' C A2078 108.382 112.412 33.939 1.00 39.46 O
ATOM 13 C1' C A2078 108.174 110.448 35.248 1.00 37.59 C
ATOM 14 N1 C A2078 108.921 109.680 36.253 1.00 37.48 N
ATOM 15 C2 C A2078 109.361 110.331 37.424 1.00 37.25 C
ATOM 16 O2 C A2078 109.103 111.535 37.579 1.00 36.85 O
ATOM 17 N3 C A2078 110.053 109.626 38.350 1.00 36.87 N
ATOM 18 C4 C A2078 110.312 108.331 38.140 1.00 36.43 C
ATOM 19 N4 C A2078 111.008 107.670 39.068 1.00 36.58 N
ATOM 20 C5 C A2078 109.870 107.650 36.964 1.00 36.74 C
ATOM 21 C6 C A2078 109.187 108.354 36.059 1.00 36.67 C
ATOM 22 P U A2079 110.717 110.913 31.140 1.00 44.42 P
ATOM 23 OP1 U A2079 111.434 112.046 31.766 1.00 44.54 O
ATOM 24 OP2 U A2079 110.542 110.879 29.664 1.00 41.90 O
ATOM 25 O5' U A2079 111.444 109.567 31.570 1.00 42.32 O
TER
ATOM 1 O3' A B2104 116.527 107.911 39.070 1.00 55.00 O
ATOM 2 P C B2105 115.770 106.818 39.975 1.00 55.59 P
ATOM 3 OP1 C B2105 116.615 105.593 40.063 1.00 53.68 O
ATOM 4 OP2 C B2105 114.375 106.704 39.483 1.00 54.00 O
ATOM 5 O5' C B2105 115.715 107.529 41.403 1.00 54.32 O
ATOM 6 C5' C B2105 116.560 107.088 42.487 1.00 52.79 C
ATOM 7 C4' C B2105 117.097 108.268 43.269 1.00 52.05 C
ATOM 8 O4' C B2105 117.783 109.177 42.364 1.00 51.08 O
ATOM 9 C3' C B2105 116.087 109.197 43.916 1.00 52.55 C
ATOM 10 O3' C B2105 115.504 108.701 45.107 1.00 52.53 O
ATOM 11 C2' C B2105 116.928 110.439 44.182 1.00 51.48 C
ATOM 12 O2' C B2105 117.780 110.339 45.303 1.00 52.16 O
ATOM 13 C1' C B2105 117.780 110.487 42.919 1.00 49.82 C
ATOM 14 N1 C B2105 117.250 111.447 41.935 1.00 47.70 N
ATOM 15 C2 C B2105 117.349 112.824 42.220 1.00 47.78 C
ATOM 16 O2 C B2105 117.802 113.183 43.323 1.00 45.96 O
ATOM 17 N3 C B2105 116.941 113.723 41.291 1.00 47.74 N
ATOM 18 C4 C B2105 116.429 113.298 40.131 1.00 47.33 C
ATOM 19 N4 C B2105 116.073 114.219 39.234 1.00 46.47 N
ATOM 20 C5 C B2105 116.269 111.908 39.839 1.00 47.38 C
ATOM 21 C6 C B2105 116.691 111.027 40.759 1.00 47.61 C
ATOM 22 P A B2106 113.992 109.109 45.458 1.00 53.48 P
ATOM 23 OP1 A B2106 113.671 108.562 46.807 1.00 54.48 O
ATOM 24 OP2 A B2106 113.151 108.721 44.291 1.00 53.00 O
ATOM 25 O5' A B2106 114.035 110.703 45.548 1.00 50.05 O
TER
ATOM 2 P C A2078 108.159 105.805 32.639 1.00 42.31 P
ATOM 3 OP1 C A2078 108.002 105.668 31.165 1.00 41.61 O
ATOM 4 OP2 C A2078 109.224 105.043 33.341 1.00 40.11 O
ATOM 5 O5' C A2078 108.336 107.348 33.004 1.00 40.06 O
ATOM 6 C5' C A2078 107.499 108.352 32.394 1.00 38.82 C
ATOM 7 C4' C A2078 107.668 109.676 33.092 1.00 38.28 C
ATOM 8 O4' C A2078 107.360 109.552 34.503 1.00 38.38 O
ATOM 9 C3' C A2078 109.077 110.229 33.076 1.00 39.19 C
ATOM 10 O3' C A2078 109.266 110.865 31.822 1.00 41.47 O
ATOM 11 C2' C A2078 109.049 111.206 34.250 1.00 38.49 C
ATOM 12 O2' C A2078 108.382 112.412 33.939 1.00 39.46 O
ATOM 13 C1' C A2078 108.174 110.448 35.248 1.00 37.59 C
ATOM 14 N1 C A2078 108.921 109.680 36.253 1.00 37.48 N
ATOM 15 C2 C A2078 109.361 110.331 37.424 1.00 37.25 C
ATOM 16 O2 C A2078 109.103 111.535 37.579 1.00 36.85 O
ATOM 17 N3 C A2078 110.053 109.626 38.350 1.00 36.87 N
ATOM 18 C4 C A2078 110.312 108.331 38.140 1.00 36.43 C
ATOM 19 N4 C A2078 111.008 107.670 39.068 1.00 36.58 N
ATOM 20 C5 C A2078 109.870 107.650 36.964 1.00 36.74 C
ATOM 21 C6 C A2078 109.187 108.354 36.059 1.00 36.67 C
ATOM 22 P U A2079 110.717 110.913 31.140 1.00 44.42 P
ATOM 23 OP1 U A2079 111.434 112.046 31.766 1.00 44.54 O
ATOM 24 OP2 U A2079 110.542 110.879 29.664 1.00 41.90 O
ATOM 25 O5' U A2079 111.444 109.567 31.570 1.00 42.32 O
TER
ATOM 1 O3' A B2104 116.527 107.911 39.070 1.00 55.00 O
ATOM 2 P C B2105 115.770 106.818 39.975 1.00 55.59 P
ATOM 3 OP1 C B2105 116.615 105.593 40.063 1.00 53.68 O
ATOM 4 OP2 C B2105 114.375 106.704 39.483 1.00 54.00 O
ATOM 5 O5' C B2105 115.715 107.529 41.403 1.00 54.32 O
ATOM 6 C5' C B2105 116.560 107.088 42.487 1.00 52.79 C
ATOM 7 C4' C B2105 117.097 108.268 43.269 1.00 52.05 C
ATOM 8 O4' C B2105 117.783 109.177 42.364 1.00 51.08 O
ATOM 9 C3' C B2105 116.087 109.197 43.916 1.00 52.55 C
ATOM 10 O3' C B2105 115.504 108.701 45.107 1.00 52.53 O
ATOM 11 C2' C B2105 116.928 110.439 44.182 1.00 51.48 C
ATOM 12 O2' C B2105 117.780 110.339 45.303 1.00 52.16 O
ATOM 13 C1' C B2105 117.780 110.487 42.919 1.00 49.82 C
ATOM 14 N1 C B2105 117.250 111.447 41.935 1.00 47.70 N
ATOM 15 C2 C B2105 117.349 112.824 42.220 1.00 47.78 C
ATOM 16 O2 C B2105 117.802 113.183 43.323 1.00 45.96 O
ATOM 17 N3 C B2105 116.941 113.723 41.291 1.00 47.74 N
ATOM 18 C4 C B2105 116.429 113.298 40.131 1.00 47.33 C
ATOM 19 N4 C B2105 116.073 114.219 39.234 1.00 46.47 N
ATOM 20 C5 C B2105 116.269 111.908 39.839 1.00 47.38 C
ATOM 21 C6 C B2105 116.691 111.027 40.759 1.00 47.61 C
ATOM 22 P A B2106 113.992 109.109 45.458 1.00 53.48 P
ATOM 23 OP1 A B2106 113.671 108.562 46.807 1.00 54.48 O
ATOM 24 OP2 A B2106 113.151 108.721 44.291 1.00 53.00 O
ATOM 25 O5' A B2106 114.035 110.703 45.548 1.00 50.05 O
TER
Atoms:
C2: (109.361,110.331,37.424)
OP1: (108.002,105.668,31.165)
OP2: (109.224,105.043,33.341)
C4: (110.312,108.331,38.140)
O5': (108.336,107.348,33.004)
C3': (109.077,110.229,33.076)
C1': (108.174,110.448,35.248)
O4': (107.360,109.552,34.503)
C5': (107.499,108.352,32.394)
P: (108.159,105.805,32.639)
O2: (109.103,111.535,37.579)
C4': (107.668,109.676,33.092)
C2': (109.049,111.206,34.250)
O2': (108.382,112.412,33.939)
N1: (108.921,109.680,36.253)
N3: (110.053,109.626,38.350)
N4: (111.008,107.670,39.068)
C6: (109.187,108.354,36.059)
C5: (109.870,107.650,36.964)
O3': (109.266,110.865,31.822)
OP1: (108.002,105.668,31.165)
OP2: (109.224,105.043,33.341)
C4: (110.312,108.331,38.140)
O5': (108.336,107.348,33.004)
C3': (109.077,110.229,33.076)
C1': (108.174,110.448,35.248)
O4': (107.360,109.552,34.503)
C5': (107.499,108.352,32.394)
P: (108.159,105.805,32.639)
O2: (109.103,111.535,37.579)
C4': (107.668,109.676,33.092)
C2': (109.049,111.206,34.250)
O2': (108.382,112.412,33.939)
N1: (108.921,109.680,36.253)
N3: (110.053,109.626,38.350)
N4: (111.008,107.670,39.068)
C6: (109.187,108.354,36.059)
C5: (109.870,107.650,36.964)
O3': (109.266,110.865,31.822)
C2: (117.349,112.824,42.220)
OP1: (116.615,105.593,40.063)
OP2: (114.375,106.704,39.483)
C4: (116.429,113.298,40.131)
O5': (115.715,107.529,41.403)
C3': (116.087,109.197,43.916)
C1': (117.780,110.487,42.919)
O4': (117.783,109.177,42.364)
C5': (116.560,107.088,42.487)
P: (115.770,106.818,39.975)
O2: (117.802,113.183,43.323)
C4': (117.097,108.268,43.269)
C2': (116.928,110.439,44.182)
O2': (117.780,110.339,45.303)
N1: (117.250,111.447,41.935)
N3: (116.941,113.723,41.291)
N4: (116.073,114.219,39.234)
C6: (116.691,111.027,40.759)
C5: (116.269,111.908,39.839)
O3': (115.504,108.701,45.107)
OP1: (116.615,105.593,40.063)
OP2: (114.375,106.704,39.483)
C4: (116.429,113.298,40.131)
O5': (115.715,107.529,41.403)
C3': (116.087,109.197,43.916)
C1': (117.780,110.487,42.919)
O4': (117.783,109.177,42.364)
C5': (116.560,107.088,42.487)
P: (115.770,106.818,39.975)
O2: (117.802,113.183,43.323)
C4': (117.097,108.268,43.269)
C2': (116.928,110.439,44.182)
O2': (117.780,110.339,45.303)
N1: (117.250,111.447,41.935)
N3: (116.941,113.723,41.291)
N4: (116.073,114.219,39.234)
C6: (116.691,111.027,40.759)
C5: (116.269,111.908,39.839)
O3': (115.504,108.701,45.107)
Image (generated by PyMOL):