Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01299:01275
Extra
PDB:
ATOM 1 O3' G A1298 18.789 143.078 61.150 1.00 39.22 O
ATOM 2 P G A1299 18.506 144.314 60.157 1.00 38.76 P
ATOM 3 OP1 G A1299 19.763 145.090 60.006 1.00 40.21 O
ATOM 4 OP2 G A1299 17.282 145.004 60.631 1.00 40.37 O
ATOM 5 O5' G A1299 18.203 143.616 58.761 1.00 38.67 O
ATOM 6 C5' G A1299 19.146 142.706 58.173 1.00 38.07 C
ATOM 7 C4' G A1299 18.439 141.771 57.217 1.00 40.80 C
ATOM 8 O4' G A1299 17.328 141.150 57.924 1.00 40.58 O
ATOM 9 C3' G A1299 17.841 142.402 55.962 1.00 40.20 C
ATOM 10 O3' G A1299 17.877 141.463 54.900 1.00 40.95 O
ATOM 11 C2' G A1299 16.396 142.653 56.371 1.00 40.44 C
ATOM 12 O2' G A1299 15.487 142.702 55.285 1.00 41.57 O
ATOM 13 C1' G A1299 16.116 141.445 57.263 1.00 39.41 C
ATOM 14 N9 G A1299 15.100 141.743 58.266 1.00 37.97 N
ATOM 15 C8 G A1299 14.920 142.936 58.929 1.00 37.95 C
ATOM 16 N7 G A1299 13.866 142.941 59.698 1.00 39.81 N
ATOM 17 C5 G A1299 13.325 141.670 59.547 1.00 38.28 C
ATOM 18 C6 G A1299 12.161 141.098 60.118 1.00 38.03 C
ATOM 19 O6 G A1299 11.342 141.623 60.880 1.00 40.16 O
ATOM 20 N1 G A1299 11.995 139.775 59.721 1.00 36.75 N
ATOM 21 C2 G A1299 12.845 139.087 58.889 1.00 38.04 C
ATOM 22 N2 G A1299 12.541 137.800 58.665 1.00 36.87 N
ATOM 23 N3 G A1299 13.922 139.618 58.328 1.00 37.42 N
ATOM 24 C4 G A1299 14.097 140.905 58.697 1.00 37.60 C
ATOM 25 P A A1300 18.713 141.794 53.567 1.00 42.83 P
ATOM 26 OP1 A A1300 19.968 142.500 53.948 1.00 44.14 O
ATOM 27 OP2 A A1300 17.805 142.406 52.569 1.00 42.33 O
ATOM 28 O5' A A1300 19.104 140.349 53.040 1.00 41.20 O
TER
ATOM 1 O3' G B1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 2 P G B1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 3 OP1 G B1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 4 OP2 G B1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 5 O5' G B1275 6.363 136.800 57.826 1.00 43.26 O
ATOM 6 C5' G B1275 6.898 135.631 57.180 1.00 43.13 C
ATOM 7 C4' G B1275 8.406 135.711 57.182 1.00 43.33 C
ATOM 8 O4' G B1275 8.809 136.964 56.545 1.00 43.97 O
ATOM 9 C3' G B1275 9.016 135.756 58.581 1.00 41.77 C
ATOM 10 O3' G B1275 10.334 135.234 58.506 1.00 40.34 O
ATOM 11 C2' G B1275 9.076 137.249 58.859 1.00 41.80 C
ATOM 12 O2' G B1275 10.002 137.611 59.858 1.00 42.86 O
ATOM 13 C1' G B1275 9.493 137.770 57.485 1.00 42.39 C
ATOM 14 N9 G B1275 9.162 139.170 57.249 1.00 40.68 N
ATOM 15 C8 G B1275 7.995 139.820 57.573 1.00 40.67 C
ATOM 16 N7 G B1275 8.027 141.096 57.297 1.00 40.96 N
ATOM 17 C5 G B1275 9.284 141.296 56.741 1.00 41.47 C
ATOM 18 C6 G B1275 9.899 142.480 56.268 1.00 41.56 C
ATOM 19 O6 G B1275 9.447 143.631 56.258 1.00 41.91 O
ATOM 20 N1 G B1275 11.179 142.232 55.782 1.00 42.08 N
ATOM 21 C2 G B1275 11.794 141.004 55.763 1.00 41.45 C
ATOM 22 N2 G B1275 13.030 140.971 55.249 1.00 40.86 N
ATOM 23 N3 G B1275 11.237 139.894 56.213 1.00 40.02 N
ATOM 24 C4 G B1275 9.990 140.112 56.687 1.00 41.37 C
ATOM 25 P A B1276 10.916 134.342 59.703 1.00 39.73 P
ATOM 26 OP1 A B1276 9.853 133.413 60.181 1.00 38.69 O
ATOM 27 OP2 A B1276 11.576 135.253 60.677 1.00 37.90 O
ATOM 28 O5' A B1276 12.010 133.465 58.953 1.00 35.08 O
TER
ATOM 2 P G A1299 18.506 144.314 60.157 1.00 38.76 P
ATOM 3 OP1 G A1299 19.763 145.090 60.006 1.00 40.21 O
ATOM 4 OP2 G A1299 17.282 145.004 60.631 1.00 40.37 O
ATOM 5 O5' G A1299 18.203 143.616 58.761 1.00 38.67 O
ATOM 6 C5' G A1299 19.146 142.706 58.173 1.00 38.07 C
ATOM 7 C4' G A1299 18.439 141.771 57.217 1.00 40.80 C
ATOM 8 O4' G A1299 17.328 141.150 57.924 1.00 40.58 O
ATOM 9 C3' G A1299 17.841 142.402 55.962 1.00 40.20 C
ATOM 10 O3' G A1299 17.877 141.463 54.900 1.00 40.95 O
ATOM 11 C2' G A1299 16.396 142.653 56.371 1.00 40.44 C
ATOM 12 O2' G A1299 15.487 142.702 55.285 1.00 41.57 O
ATOM 13 C1' G A1299 16.116 141.445 57.263 1.00 39.41 C
ATOM 14 N9 G A1299 15.100 141.743 58.266 1.00 37.97 N
ATOM 15 C8 G A1299 14.920 142.936 58.929 1.00 37.95 C
ATOM 16 N7 G A1299 13.866 142.941 59.698 1.00 39.81 N
ATOM 17 C5 G A1299 13.325 141.670 59.547 1.00 38.28 C
ATOM 18 C6 G A1299 12.161 141.098 60.118 1.00 38.03 C
ATOM 19 O6 G A1299 11.342 141.623 60.880 1.00 40.16 O
ATOM 20 N1 G A1299 11.995 139.775 59.721 1.00 36.75 N
ATOM 21 C2 G A1299 12.845 139.087 58.889 1.00 38.04 C
ATOM 22 N2 G A1299 12.541 137.800 58.665 1.00 36.87 N
ATOM 23 N3 G A1299 13.922 139.618 58.328 1.00 37.42 N
ATOM 24 C4 G A1299 14.097 140.905 58.697 1.00 37.60 C
ATOM 25 P A A1300 18.713 141.794 53.567 1.00 42.83 P
ATOM 26 OP1 A A1300 19.968 142.500 53.948 1.00 44.14 O
ATOM 27 OP2 A A1300 17.805 142.406 52.569 1.00 42.33 O
ATOM 28 O5' A A1300 19.104 140.349 53.040 1.00 41.20 O
TER
ATOM 1 O3' G B1274 3.946 136.719 57.109 1.00 45.69 O
ATOM 2 P G B1275 4.886 136.828 58.405 1.00 44.00 P
ATOM 3 OP1 G B1275 4.648 135.593 59.194 1.00 43.14 O
ATOM 4 OP2 G B1275 4.688 138.150 59.039 1.00 42.81 O
ATOM 5 O5' G B1275 6.363 136.800 57.826 1.00 43.26 O
ATOM 6 C5' G B1275 6.898 135.631 57.180 1.00 43.13 C
ATOM 7 C4' G B1275 8.406 135.711 57.182 1.00 43.33 C
ATOM 8 O4' G B1275 8.809 136.964 56.545 1.00 43.97 O
ATOM 9 C3' G B1275 9.016 135.756 58.581 1.00 41.77 C
ATOM 10 O3' G B1275 10.334 135.234 58.506 1.00 40.34 O
ATOM 11 C2' G B1275 9.076 137.249 58.859 1.00 41.80 C
ATOM 12 O2' G B1275 10.002 137.611 59.858 1.00 42.86 O
ATOM 13 C1' G B1275 9.493 137.770 57.485 1.00 42.39 C
ATOM 14 N9 G B1275 9.162 139.170 57.249 1.00 40.68 N
ATOM 15 C8 G B1275 7.995 139.820 57.573 1.00 40.67 C
ATOM 16 N7 G B1275 8.027 141.096 57.297 1.00 40.96 N
ATOM 17 C5 G B1275 9.284 141.296 56.741 1.00 41.47 C
ATOM 18 C6 G B1275 9.899 142.480 56.268 1.00 41.56 C
ATOM 19 O6 G B1275 9.447 143.631 56.258 1.00 41.91 O
ATOM 20 N1 G B1275 11.179 142.232 55.782 1.00 42.08 N
ATOM 21 C2 G B1275 11.794 141.004 55.763 1.00 41.45 C
ATOM 22 N2 G B1275 13.030 140.971 55.249 1.00 40.86 N
ATOM 23 N3 G B1275 11.237 139.894 56.213 1.00 40.02 N
ATOM 24 C4 G B1275 9.990 140.112 56.687 1.00 41.37 C
ATOM 25 P A B1276 10.916 134.342 59.703 1.00 39.73 P
ATOM 26 OP1 A B1276 9.853 133.413 60.181 1.00 38.69 O
ATOM 27 OP2 A B1276 11.576 135.253 60.677 1.00 37.90 O
ATOM 28 O5' A B1276 12.010 133.465 58.953 1.00 35.08 O
TER
Atoms:
OP1: (19.763,145.090,60.006)
OP2: (17.282,145.004,60.631)
C3': (17.841,142.402,55.962)
C1': (16.116,141.445,57.263)
C5': (19.146,142.706,58.173)
O6: (11.342,141.623,60.880)
O4': (17.328,141.150,57.924)
C8: (14.920,142.936,58.929)
C2: (12.845,139.087,58.889)
C6: (12.161,141.098,60.118)
C5: (13.325,141.670,59.547)
C4: (14.097,140.905,58.697)
P: (18.506,144.314,60.157)
C4': (18.439,141.771,57.217)
C2': (16.396,142.653,56.371)
O2': (15.487,142.702,55.285)
N1: (11.995,139.775,59.721)
N2: (12.541,137.800,58.665)
N3: (13.922,139.618,58.328)
N7: (13.866,142.941,59.698)
N9: (15.100,141.743,58.266)
O5': (18.203,143.616,58.761)
O3': (17.877,141.463,54.900)
OP2: (17.282,145.004,60.631)
C3': (17.841,142.402,55.962)
C1': (16.116,141.445,57.263)
C5': (19.146,142.706,58.173)
O6: (11.342,141.623,60.880)
O4': (17.328,141.150,57.924)
C8: (14.920,142.936,58.929)
C2: (12.845,139.087,58.889)
C6: (12.161,141.098,60.118)
C5: (13.325,141.670,59.547)
C4: (14.097,140.905,58.697)
P: (18.506,144.314,60.157)
C4': (18.439,141.771,57.217)
C2': (16.396,142.653,56.371)
O2': (15.487,142.702,55.285)
N1: (11.995,139.775,59.721)
N2: (12.541,137.800,58.665)
N3: (13.922,139.618,58.328)
N7: (13.866,142.941,59.698)
N9: (15.100,141.743,58.266)
O5': (18.203,143.616,58.761)
O3': (17.877,141.463,54.900)
OP1: (4.648,135.593,59.194)
OP2: (4.688,138.150,59.039)
C3': (9.016,135.756,58.581)
C1': (9.493,137.770,57.485)
C5': (6.898,135.631,57.180)
O6: (9.447,143.631,56.258)
O4': (8.809,136.964,56.545)
C8: (7.995,139.820,57.573)
C2: (11.794,141.004,55.763)
C6: (9.899,142.480,56.268)
C5: (9.284,141.296,56.741)
C4: (9.990,140.112,56.687)
P: (4.886,136.828,58.405)
C4': (8.406,135.711,57.182)
C2': (9.076,137.249,58.859)
O2': (10.002,137.611,59.858)
N1: (11.179,142.232,55.782)
N2: (13.030,140.971,55.249)
N3: (11.237,139.894,56.213)
N7: (8.027,141.096,57.297)
N9: (9.162,139.170,57.249)
O5': (6.363,136.800,57.826)
O3': (10.334,135.234,58.506)
OP2: (4.688,138.150,59.039)
C3': (9.016,135.756,58.581)
C1': (9.493,137.770,57.485)
C5': (6.898,135.631,57.180)
O6: (9.447,143.631,56.258)
O4': (8.809,136.964,56.545)
C8: (7.995,139.820,57.573)
C2: (11.794,141.004,55.763)
C6: (9.899,142.480,56.268)
C5: (9.284,141.296,56.741)
C4: (9.990,140.112,56.687)
P: (4.886,136.828,58.405)
C4': (8.406,135.711,57.182)
C2': (9.076,137.249,58.859)
O2': (10.002,137.611,59.858)
N1: (11.179,142.232,55.782)
N2: (13.030,140.971,55.249)
N3: (11.237,139.894,56.213)
N7: (8.027,141.096,57.297)
N9: (9.162,139.170,57.249)
O5': (6.363,136.800,57.826)
O3': (10.334,135.234,58.506)
Image (generated by PyMOL):