Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:02078:02105
Extra
PDB:
ATOM 1 O3' G A2077 107.068 104.851 33.251 1.00 41.42 O
ATOM 2 P C A2078 108.468 105.271 32.570 1.00 42.21 P
ATOM 3 OP1 C A2078 108.274 105.123 31.100 1.00 41.74 O
ATOM 4 OP2 C A2078 109.575 104.545 33.244 1.00 39.71 O
ATOM 5 O5' C A2078 108.621 106.820 32.896 1.00 40.51 O
ATOM 6 C5' C A2078 107.666 107.770 32.402 1.00 40.70 C
ATOM 7 C4' C A2078 107.858 109.107 33.076 1.00 41.90 C
ATOM 8 O4' C A2078 107.585 109.000 34.498 1.00 40.42 O
ATOM 9 C3' C A2078 109.261 109.685 33.015 1.00 42.74 C
ATOM 10 O3' C A2078 109.472 110.298 31.750 1.00 46.50 O
ATOM 11 C2' C A2078 109.237 110.680 34.170 1.00 41.96 C
ATOM 12 O2' C A2078 108.540 111.867 33.844 1.00 42.49 O
ATOM 13 C1' C A2078 108.415 109.909 35.208 1.00 40.02 C
ATOM 14 N1 C A2078 109.228 109.147 36.177 1.00 37.94 N
ATOM 15 C2 C A2078 109.691 109.793 37.334 1.00 38.09 C
ATOM 16 O2 C A2078 109.430 110.995 37.501 1.00 41.23 O
ATOM 17 N3 C A2078 110.417 109.092 38.236 1.00 36.97 N
ATOM 18 C4 C A2078 110.697 107.805 38.012 1.00 36.16 C
ATOM 19 N4 C A2078 111.419 107.151 38.927 1.00 35.57 N
ATOM 20 C5 C A2078 110.252 107.129 36.840 1.00 34.92 C
ATOM 21 C6 C A2078 109.526 107.829 35.960 1.00 36.98 C
ATOM 22 P U A2079 110.952 110.385 31.123 1.00 50.14 P
ATOM 23 OP1 U A2079 111.651 111.508 31.797 1.00 50.54 O
ATOM 24 OP2 U A2079 110.802 110.394 29.643 1.00 50.83 O
ATOM 25 O5' U A2079 111.680 109.029 31.526 1.00 47.97 O
TER
ATOM 1 O3' A B2104 116.861 107.505 38.992 1.00 56.77 O
ATOM 2 P C B2105 116.090 106.436 39.913 1.00 55.77 P
ATOM 3 OP1 C B2105 116.881 105.179 39.980 1.00 55.97 O
ATOM 4 OP2 C B2105 114.685 106.388 39.431 1.00 56.18 O
ATOM 5 O5' C B2105 116.084 107.144 41.344 1.00 54.90 O
ATOM 6 C5' C B2105 116.942 106.689 42.402 1.00 52.52 C
ATOM 7 C4' C B2105 117.457 107.858 43.212 1.00 50.98 C
ATOM 8 O4' C B2105 118.205 108.762 42.354 1.00 49.99 O
ATOM 9 C3' C B2105 116.432 108.780 43.854 1.00 51.49 C
ATOM 10 O3' C B2105 115.864 108.241 45.043 1.00 51.61 O
ATOM 11 C2' C B2105 117.282 110.008 44.153 1.00 50.67 C
ATOM 12 O2' C B2105 118.113 109.839 45.284 1.00 50.01 O
ATOM 13 C1' C B2105 118.156 110.073 42.900 1.00 48.39 C
ATOM 14 N1 C B2105 117.619 111.010 41.894 1.00 46.75 N
ATOM 15 C2 C B2105 117.763 112.388 42.123 1.00 46.58 C
ATOM 16 O2 C B2105 118.315 112.771 43.169 1.00 48.12 O
ATOM 17 N3 C B2105 117.294 113.266 41.207 1.00 44.40 N
ATOM 18 C4 C B2105 116.699 112.820 40.101 1.00 43.01 C
ATOM 19 N4 C B2105 116.270 113.727 39.222 1.00 41.26 N
ATOM 20 C5 C B2105 116.521 111.426 39.847 1.00 43.32 C
ATOM 21 C6 C B2105 116.994 110.564 40.761 1.00 45.46 C
ATOM 22 P A B2106 114.359 108.639 45.461 1.00 52.55 P
ATOM 23 OP1 A B2106 114.143 108.096 46.825 1.00 53.69 O
ATOM 24 OP2 A B2106 113.427 108.261 44.365 1.00 51.59 O
ATOM 25 O5' A B2106 114.380 110.229 45.559 1.00 50.09 O
TER
ATOM 2 P C A2078 108.468 105.271 32.570 1.00 42.21 P
ATOM 3 OP1 C A2078 108.274 105.123 31.100 1.00 41.74 O
ATOM 4 OP2 C A2078 109.575 104.545 33.244 1.00 39.71 O
ATOM 5 O5' C A2078 108.621 106.820 32.896 1.00 40.51 O
ATOM 6 C5' C A2078 107.666 107.770 32.402 1.00 40.70 C
ATOM 7 C4' C A2078 107.858 109.107 33.076 1.00 41.90 C
ATOM 8 O4' C A2078 107.585 109.000 34.498 1.00 40.42 O
ATOM 9 C3' C A2078 109.261 109.685 33.015 1.00 42.74 C
ATOM 10 O3' C A2078 109.472 110.298 31.750 1.00 46.50 O
ATOM 11 C2' C A2078 109.237 110.680 34.170 1.00 41.96 C
ATOM 12 O2' C A2078 108.540 111.867 33.844 1.00 42.49 O
ATOM 13 C1' C A2078 108.415 109.909 35.208 1.00 40.02 C
ATOM 14 N1 C A2078 109.228 109.147 36.177 1.00 37.94 N
ATOM 15 C2 C A2078 109.691 109.793 37.334 1.00 38.09 C
ATOM 16 O2 C A2078 109.430 110.995 37.501 1.00 41.23 O
ATOM 17 N3 C A2078 110.417 109.092 38.236 1.00 36.97 N
ATOM 18 C4 C A2078 110.697 107.805 38.012 1.00 36.16 C
ATOM 19 N4 C A2078 111.419 107.151 38.927 1.00 35.57 N
ATOM 20 C5 C A2078 110.252 107.129 36.840 1.00 34.92 C
ATOM 21 C6 C A2078 109.526 107.829 35.960 1.00 36.98 C
ATOM 22 P U A2079 110.952 110.385 31.123 1.00 50.14 P
ATOM 23 OP1 U A2079 111.651 111.508 31.797 1.00 50.54 O
ATOM 24 OP2 U A2079 110.802 110.394 29.643 1.00 50.83 O
ATOM 25 O5' U A2079 111.680 109.029 31.526 1.00 47.97 O
TER
ATOM 1 O3' A B2104 116.861 107.505 38.992 1.00 56.77 O
ATOM 2 P C B2105 116.090 106.436 39.913 1.00 55.77 P
ATOM 3 OP1 C B2105 116.881 105.179 39.980 1.00 55.97 O
ATOM 4 OP2 C B2105 114.685 106.388 39.431 1.00 56.18 O
ATOM 5 O5' C B2105 116.084 107.144 41.344 1.00 54.90 O
ATOM 6 C5' C B2105 116.942 106.689 42.402 1.00 52.52 C
ATOM 7 C4' C B2105 117.457 107.858 43.212 1.00 50.98 C
ATOM 8 O4' C B2105 118.205 108.762 42.354 1.00 49.99 O
ATOM 9 C3' C B2105 116.432 108.780 43.854 1.00 51.49 C
ATOM 10 O3' C B2105 115.864 108.241 45.043 1.00 51.61 O
ATOM 11 C2' C B2105 117.282 110.008 44.153 1.00 50.67 C
ATOM 12 O2' C B2105 118.113 109.839 45.284 1.00 50.01 O
ATOM 13 C1' C B2105 118.156 110.073 42.900 1.00 48.39 C
ATOM 14 N1 C B2105 117.619 111.010 41.894 1.00 46.75 N
ATOM 15 C2 C B2105 117.763 112.388 42.123 1.00 46.58 C
ATOM 16 O2 C B2105 118.315 112.771 43.169 1.00 48.12 O
ATOM 17 N3 C B2105 117.294 113.266 41.207 1.00 44.40 N
ATOM 18 C4 C B2105 116.699 112.820 40.101 1.00 43.01 C
ATOM 19 N4 C B2105 116.270 113.727 39.222 1.00 41.26 N
ATOM 20 C5 C B2105 116.521 111.426 39.847 1.00 43.32 C
ATOM 21 C6 C B2105 116.994 110.564 40.761 1.00 45.46 C
ATOM 22 P A B2106 114.359 108.639 45.461 1.00 52.55 P
ATOM 23 OP1 A B2106 114.143 108.096 46.825 1.00 53.69 O
ATOM 24 OP2 A B2106 113.427 108.261 44.365 1.00 51.59 O
ATOM 25 O5' A B2106 114.380 110.229 45.559 1.00 50.09 O
TER
Atoms:
C2: (109.691,109.793,37.334)
OP1: (108.274,105.123,31.100)
OP2: (109.575,104.545,33.244)
C4: (110.697,107.805,38.012)
O5': (108.621,106.820,32.896)
C3': (109.261,109.685,33.015)
C1': (108.415,109.909,35.208)
O4': (107.585,109.000,34.498)
C5': (107.666,107.770,32.402)
P: (108.468,105.271,32.570)
O2: (109.430,110.995,37.501)
C4': (107.858,109.107,33.076)
C2': (109.237,110.680,34.170)
O2': (108.540,111.867,33.844)
N1: (109.228,109.147,36.177)
N3: (110.417,109.092,38.236)
N4: (111.419,107.151,38.927)
C6: (109.526,107.829,35.960)
C5: (110.252,107.129,36.840)
O3': (109.472,110.298,31.750)
OP1: (108.274,105.123,31.100)
OP2: (109.575,104.545,33.244)
C4: (110.697,107.805,38.012)
O5': (108.621,106.820,32.896)
C3': (109.261,109.685,33.015)
C1': (108.415,109.909,35.208)
O4': (107.585,109.000,34.498)
C5': (107.666,107.770,32.402)
P: (108.468,105.271,32.570)
O2: (109.430,110.995,37.501)
C4': (107.858,109.107,33.076)
C2': (109.237,110.680,34.170)
O2': (108.540,111.867,33.844)
N1: (109.228,109.147,36.177)
N3: (110.417,109.092,38.236)
N4: (111.419,107.151,38.927)
C6: (109.526,107.829,35.960)
C5: (110.252,107.129,36.840)
O3': (109.472,110.298,31.750)
C2: (117.763,112.388,42.123)
OP1: (116.881,105.179,39.980)
OP2: (114.685,106.388,39.431)
C4: (116.699,112.820,40.101)
O5': (116.084,107.144,41.344)
C3': (116.432,108.780,43.854)
C1': (118.156,110.073,42.900)
O4': (118.205,108.762,42.354)
C5': (116.942,106.689,42.402)
P: (116.090,106.436,39.913)
O2: (118.315,112.771,43.169)
C4': (117.457,107.858,43.212)
C2': (117.282,110.008,44.153)
O2': (118.113,109.839,45.284)
N1: (117.619,111.010,41.894)
N3: (117.294,113.266,41.207)
N4: (116.270,113.727,39.222)
C6: (116.994,110.564,40.761)
C5: (116.521,111.426,39.847)
O3': (115.864,108.241,45.043)
OP1: (116.881,105.179,39.980)
OP2: (114.685,106.388,39.431)
C4: (116.699,112.820,40.101)
O5': (116.084,107.144,41.344)
C3': (116.432,108.780,43.854)
C1': (118.156,110.073,42.900)
O4': (118.205,108.762,42.354)
C5': (116.942,106.689,42.402)
P: (116.090,106.436,39.913)
O2: (118.315,112.771,43.169)
C4': (117.457,107.858,43.212)
C2': (117.282,110.008,44.153)
O2': (118.113,109.839,45.284)
N1: (117.619,111.010,41.894)
N3: (117.294,113.266,41.207)
N4: (116.270,113.727,39.222)
C6: (116.994,110.564,40.761)
C5: (116.521,111.426,39.847)
O3': (115.864,108.241,45.043)
Image (generated by PyMOL):