Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:02078:02105
Extra
PDB:
ATOM 1 O3' G A2077 107.140 105.474 33.464 1.00 56.06 O
ATOM 2 P C A2078 108.563 105.865 32.811 1.00 55.55 P
ATOM 3 OP1 C A2078 108.424 105.660 31.348 1.00 55.29 O
ATOM 4 OP2 C A2078 109.645 105.170 33.559 1.00 52.78 O
ATOM 5 O5' C A2078 108.699 107.426 33.080 1.00 54.53 O
ATOM 6 C5' C A2078 107.751 108.351 32.519 1.00 52.91 C
ATOM 7 C4' C A2078 107.914 109.708 33.153 1.00 52.23 C
ATOM 8 O4' C A2078 107.617 109.620 34.569 1.00 51.62 O
ATOM 9 C3' C A2078 109.317 110.288 33.107 1.00 53.03 C
ATOM 10 O3' C A2078 109.546 110.891 31.842 1.00 55.93 O
ATOM 11 C2' C A2078 109.285 111.289 34.253 1.00 51.43 C
ATOM 12 O2' C A2078 108.604 112.482 33.913 1.00 51.96 O
ATOM 13 C1' C A2078 108.442 110.529 35.281 1.00 50.91 C
ATOM 14 N1 C A2078 109.230 109.772 36.271 1.00 48.98 N
ATOM 15 C2 C A2078 109.668 110.434 37.425 1.00 48.50 C
ATOM 16 O2 C A2078 109.402 111.641 37.564 1.00 49.26 O
ATOM 17 N3 C A2078 110.370 109.745 38.357 1.00 47.90 N
ATOM 18 C4 C A2078 110.647 108.454 38.162 1.00 46.58 C
ATOM 19 N4 C A2078 111.339 107.814 39.109 1.00 47.35 N
ATOM 20 C5 C A2078 110.227 107.761 36.988 1.00 45.51 C
ATOM 21 C6 C A2078 109.526 108.449 36.080 1.00 46.34 C
ATOM 22 P U A2079 111.036 110.992 31.246 1.00 57.80 P
ATOM 23 OP1 U A2079 111.654 112.203 31.846 1.00 56.71 O
ATOM 24 OP2 U A2079 110.925 110.876 29.762 1.00 56.25 O
ATOM 25 O5' U A2079 111.815 109.709 31.776 1.00 54.85 O
TER
ATOM 1 O3' A B2104 116.883 108.163 39.291 1.00 69.65 O
ATOM 2 P C B2105 116.135 107.056 40.195 1.00 68.65 P
ATOM 3 OP1 C B2105 116.961 105.819 40.267 1.00 66.71 O
ATOM 4 OP2 C B2105 114.734 106.963 39.705 1.00 67.72 O
ATOM 5 O5' C B2105 116.094 107.755 41.632 1.00 67.31 O
ATOM 6 C5' C B2105 117.019 107.382 42.671 1.00 65.21 C
ATOM 7 C4' C B2105 117.478 108.599 43.450 1.00 64.29 C
ATOM 8 O4' C B2105 118.182 109.516 42.570 1.00 62.67 O
ATOM 9 C3' C B2105 116.418 109.492 44.074 1.00 63.91 C
ATOM 10 O3' C B2105 115.877 108.962 45.278 1.00 64.26 O
ATOM 11 C2' C B2105 117.208 110.767 44.344 1.00 62.07 C
ATOM 12 O2' C B2105 118.025 110.687 45.492 1.00 62.36 O
ATOM 13 C1' C B2105 118.099 110.831 43.104 1.00 60.75 C
ATOM 14 N1 C B2105 117.568 111.745 42.078 1.00 58.26 N
ATOM 15 C2 C B2105 117.668 113.127 42.301 1.00 57.97 C
ATOM 16 O2 C B2105 118.187 113.533 43.358 1.00 57.82 O
ATOM 17 N3 C B2105 117.195 113.983 41.366 1.00 57.52 N
ATOM 18 C4 C B2105 116.636 113.510 40.249 1.00 57.85 C
ATOM 19 N4 C B2105 116.182 114.394 39.355 1.00 56.89 N
ATOM 20 C5 C B2105 116.515 112.109 40.000 1.00 57.67 C
ATOM 21 C6 C B2105 116.990 111.271 40.932 1.00 57.82 C
ATOM 22 P A B2106 114.365 109.321 45.692 1.00 63.99 P
ATOM 23 OP1 A B2106 114.146 108.775 47.055 1.00 66.13 O
ATOM 24 OP2 A B2106 113.469 108.902 44.580 1.00 64.03 O
ATOM 25 O5' A B2106 114.348 110.912 45.788 1.00 61.20 O
TER
ATOM 2 P C A2078 108.563 105.865 32.811 1.00 55.55 P
ATOM 3 OP1 C A2078 108.424 105.660 31.348 1.00 55.29 O
ATOM 4 OP2 C A2078 109.645 105.170 33.559 1.00 52.78 O
ATOM 5 O5' C A2078 108.699 107.426 33.080 1.00 54.53 O
ATOM 6 C5' C A2078 107.751 108.351 32.519 1.00 52.91 C
ATOM 7 C4' C A2078 107.914 109.708 33.153 1.00 52.23 C
ATOM 8 O4' C A2078 107.617 109.620 34.569 1.00 51.62 O
ATOM 9 C3' C A2078 109.317 110.288 33.107 1.00 53.03 C
ATOM 10 O3' C A2078 109.546 110.891 31.842 1.00 55.93 O
ATOM 11 C2' C A2078 109.285 111.289 34.253 1.00 51.43 C
ATOM 12 O2' C A2078 108.604 112.482 33.913 1.00 51.96 O
ATOM 13 C1' C A2078 108.442 110.529 35.281 1.00 50.91 C
ATOM 14 N1 C A2078 109.230 109.772 36.271 1.00 48.98 N
ATOM 15 C2 C A2078 109.668 110.434 37.425 1.00 48.50 C
ATOM 16 O2 C A2078 109.402 111.641 37.564 1.00 49.26 O
ATOM 17 N3 C A2078 110.370 109.745 38.357 1.00 47.90 N
ATOM 18 C4 C A2078 110.647 108.454 38.162 1.00 46.58 C
ATOM 19 N4 C A2078 111.339 107.814 39.109 1.00 47.35 N
ATOM 20 C5 C A2078 110.227 107.761 36.988 1.00 45.51 C
ATOM 21 C6 C A2078 109.526 108.449 36.080 1.00 46.34 C
ATOM 22 P U A2079 111.036 110.992 31.246 1.00 57.80 P
ATOM 23 OP1 U A2079 111.654 112.203 31.846 1.00 56.71 O
ATOM 24 OP2 U A2079 110.925 110.876 29.762 1.00 56.25 O
ATOM 25 O5' U A2079 111.815 109.709 31.776 1.00 54.85 O
TER
ATOM 1 O3' A B2104 116.883 108.163 39.291 1.00 69.65 O
ATOM 2 P C B2105 116.135 107.056 40.195 1.00 68.65 P
ATOM 3 OP1 C B2105 116.961 105.819 40.267 1.00 66.71 O
ATOM 4 OP2 C B2105 114.734 106.963 39.705 1.00 67.72 O
ATOM 5 O5' C B2105 116.094 107.755 41.632 1.00 67.31 O
ATOM 6 C5' C B2105 117.019 107.382 42.671 1.00 65.21 C
ATOM 7 C4' C B2105 117.478 108.599 43.450 1.00 64.29 C
ATOM 8 O4' C B2105 118.182 109.516 42.570 1.00 62.67 O
ATOM 9 C3' C B2105 116.418 109.492 44.074 1.00 63.91 C
ATOM 10 O3' C B2105 115.877 108.962 45.278 1.00 64.26 O
ATOM 11 C2' C B2105 117.208 110.767 44.344 1.00 62.07 C
ATOM 12 O2' C B2105 118.025 110.687 45.492 1.00 62.36 O
ATOM 13 C1' C B2105 118.099 110.831 43.104 1.00 60.75 C
ATOM 14 N1 C B2105 117.568 111.745 42.078 1.00 58.26 N
ATOM 15 C2 C B2105 117.668 113.127 42.301 1.00 57.97 C
ATOM 16 O2 C B2105 118.187 113.533 43.358 1.00 57.82 O
ATOM 17 N3 C B2105 117.195 113.983 41.366 1.00 57.52 N
ATOM 18 C4 C B2105 116.636 113.510 40.249 1.00 57.85 C
ATOM 19 N4 C B2105 116.182 114.394 39.355 1.00 56.89 N
ATOM 20 C5 C B2105 116.515 112.109 40.000 1.00 57.67 C
ATOM 21 C6 C B2105 116.990 111.271 40.932 1.00 57.82 C
ATOM 22 P A B2106 114.365 109.321 45.692 1.00 63.99 P
ATOM 23 OP1 A B2106 114.146 108.775 47.055 1.00 66.13 O
ATOM 24 OP2 A B2106 113.469 108.902 44.580 1.00 64.03 O
ATOM 25 O5' A B2106 114.348 110.912 45.788 1.00 61.20 O
TER
Atoms:
C2: (109.668,110.434,37.425)
OP1: (108.424,105.660,31.348)
OP2: (109.645,105.170,33.559)
C4: (110.647,108.454,38.162)
O5': (108.699,107.426,33.080)
C3': (109.317,110.288,33.107)
C1': (108.442,110.529,35.281)
O4': (107.617,109.620,34.569)
C5': (107.751,108.351,32.519)
P: (108.563,105.865,32.811)
O2: (109.402,111.641,37.564)
C4': (107.914,109.708,33.153)
C2': (109.285,111.289,34.253)
O2': (108.604,112.482,33.913)
N1: (109.230,109.772,36.271)
N3: (110.370,109.745,38.357)
N4: (111.339,107.814,39.109)
C6: (109.526,108.449,36.080)
C5: (110.227,107.761,36.988)
O3': (109.546,110.891,31.842)
OP1: (108.424,105.660,31.348)
OP2: (109.645,105.170,33.559)
C4: (110.647,108.454,38.162)
O5': (108.699,107.426,33.080)
C3': (109.317,110.288,33.107)
C1': (108.442,110.529,35.281)
O4': (107.617,109.620,34.569)
C5': (107.751,108.351,32.519)
P: (108.563,105.865,32.811)
O2: (109.402,111.641,37.564)
C4': (107.914,109.708,33.153)
C2': (109.285,111.289,34.253)
O2': (108.604,112.482,33.913)
N1: (109.230,109.772,36.271)
N3: (110.370,109.745,38.357)
N4: (111.339,107.814,39.109)
C6: (109.526,108.449,36.080)
C5: (110.227,107.761,36.988)
O3': (109.546,110.891,31.842)
C2: (117.668,113.127,42.301)
OP1: (116.961,105.819,40.267)
OP2: (114.734,106.963,39.705)
C4: (116.636,113.510,40.249)
O5': (116.094,107.755,41.632)
C3': (116.418,109.492,44.074)
C1': (118.099,110.831,43.104)
O4': (118.182,109.516,42.570)
C5': (117.019,107.382,42.671)
P: (116.135,107.056,40.195)
O2: (118.187,113.533,43.358)
C4': (117.478,108.599,43.450)
C2': (117.208,110.767,44.344)
O2': (118.025,110.687,45.492)
N1: (117.568,111.745,42.078)
N3: (117.195,113.983,41.366)
N4: (116.182,114.394,39.355)
C6: (116.990,111.271,40.932)
C5: (116.515,112.109,40.000)
O3': (115.877,108.962,45.278)
OP1: (116.961,105.819,40.267)
OP2: (114.734,106.963,39.705)
C4: (116.636,113.510,40.249)
O5': (116.094,107.755,41.632)
C3': (116.418,109.492,44.074)
C1': (118.099,110.831,43.104)
O4': (118.182,109.516,42.570)
C5': (117.019,107.382,42.671)
P: (116.135,107.056,40.195)
O2: (118.187,113.533,43.358)
C4': (117.478,108.599,43.450)
C2': (117.208,110.767,44.344)
O2': (118.025,110.687,45.492)
N1: (117.568,111.745,42.078)
N3: (117.195,113.983,41.366)
N4: (116.182,114.394,39.355)
C6: (116.990,111.271,40.932)
C5: (116.515,112.109,40.000)
O3': (115.877,108.962,45.278)
Image (generated by PyMOL):