Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02078:02105
Extra
PDB:
ATOM 1 O3' G A2077 107.032 105.421 33.461 1.00 52.56 O
ATOM 2 P C A2078 108.460 105.806 32.815 1.00 53.11 P
ATOM 3 OP1 C A2078 108.311 105.659 31.344 1.00 52.12 O
ATOM 4 OP2 C A2078 109.517 105.045 33.529 1.00 51.47 O
ATOM 5 O5' C A2078 108.634 107.355 33.145 1.00 51.89 O
ATOM 6 C5' C A2078 107.729 108.325 32.581 1.00 52.45 C
ATOM 7 C4' C A2078 107.923 109.677 33.225 1.00 52.26 C
ATOM 8 O4' C A2078 107.635 109.597 34.643 1.00 52.01 O
ATOM 9 C3' C A2078 109.324 110.259 33.162 1.00 52.52 C
ATOM 10 O3' C A2078 109.526 110.870 31.895 1.00 54.45 O
ATOM 11 C2' C A2078 109.303 111.263 34.309 1.00 51.80 C
ATOM 12 O2' C A2078 108.624 112.459 33.979 1.00 52.31 O
ATOM 13 C1' C A2078 108.460 110.515 35.345 1.00 51.07 C
ATOM 14 N1 C A2078 109.233 109.775 36.361 1.00 49.63 N
ATOM 15 C2 C A2078 109.601 110.437 37.544 1.00 49.17 C
ATOM 16 O2 C A2078 109.283 111.635 37.695 1.00 50.17 O
ATOM 17 N3 C A2078 110.289 109.756 38.491 1.00 48.12 N
ATOM 18 C4 C A2078 110.611 108.474 38.292 1.00 47.67 C
ATOM 19 N4 C A2078 111.284 107.841 39.256 1.00 48.57 N
ATOM 20 C5 C A2078 110.257 107.784 37.099 1.00 46.98 C
ATOM 21 C6 C A2078 109.579 108.464 36.168 1.00 48.34 C
ATOM 22 P U A2079 111.001 110.950 31.255 1.00 57.40 P
ATOM 23 OP1 U A2079 111.715 112.082 31.902 1.00 56.92 O
ATOM 24 OP2 U A2079 110.860 110.919 29.772 1.00 55.44 O
ATOM 25 O5' U A2079 111.724 109.604 31.689 1.00 55.36 O
TER
ATOM 1 O3' A B2104 116.812 108.105 39.157 1.00 63.25 O
ATOM 2 P C B2105 116.086 107.021 40.105 1.00 62.66 P
ATOM 3 OP1 C B2105 116.929 105.796 40.196 1.00 61.60 O
ATOM 4 OP2 C B2105 114.680 106.896 39.639 1.00 61.97 O
ATOM 5 O5' C B2105 116.065 107.757 41.523 1.00 60.89 O
ATOM 6 C5' C B2105 116.940 107.343 42.588 1.00 58.84 C
ATOM 7 C4' C B2105 117.440 108.537 43.372 1.00 57.54 C
ATOM 8 O4' C B2105 118.155 109.440 42.489 1.00 56.26 O
ATOM 9 C3' C B2105 116.414 109.458 44.010 1.00 57.41 C
ATOM 10 O3' C B2105 115.865 108.944 45.215 1.00 57.79 O
ATOM 11 C2' C B2105 117.251 110.699 44.291 1.00 56.40 C
ATOM 12 O2' C B2105 118.063 110.581 45.445 1.00 56.24 O
ATOM 13 C1' C B2105 118.130 110.749 43.041 1.00 54.36 C
ATOM 14 N1 C B2105 117.604 111.693 42.041 1.00 51.87 N
ATOM 15 C2 C B2105 117.695 113.066 42.312 1.00 51.82 C
ATOM 16 O2 C B2105 118.209 113.435 43.384 1.00 51.26 O
ATOM 17 N3 C B2105 117.220 113.952 41.407 1.00 51.65 N
ATOM 18 C4 C B2105 116.670 113.516 40.271 1.00 51.72 C
ATOM 19 N4 C B2105 116.218 114.429 39.409 1.00 52.30 N
ATOM 20 C5 C B2105 116.561 112.126 39.969 1.00 50.53 C
ATOM 21 C6 C B2105 117.037 111.258 40.874 1.00 51.28 C
ATOM 22 P A B2106 114.373 109.363 45.646 1.00 57.73 P
ATOM 23 OP1 A B2106 114.171 108.866 47.031 1.00 58.75 O
ATOM 24 OP2 A B2106 113.436 108.939 44.568 1.00 56.26 O
ATOM 25 O5' A B2106 114.413 110.955 45.701 1.00 53.34 O
TER
ATOM 2 P C A2078 108.460 105.806 32.815 1.00 53.11 P
ATOM 3 OP1 C A2078 108.311 105.659 31.344 1.00 52.12 O
ATOM 4 OP2 C A2078 109.517 105.045 33.529 1.00 51.47 O
ATOM 5 O5' C A2078 108.634 107.355 33.145 1.00 51.89 O
ATOM 6 C5' C A2078 107.729 108.325 32.581 1.00 52.45 C
ATOM 7 C4' C A2078 107.923 109.677 33.225 1.00 52.26 C
ATOM 8 O4' C A2078 107.635 109.597 34.643 1.00 52.01 O
ATOM 9 C3' C A2078 109.324 110.259 33.162 1.00 52.52 C
ATOM 10 O3' C A2078 109.526 110.870 31.895 1.00 54.45 O
ATOM 11 C2' C A2078 109.303 111.263 34.309 1.00 51.80 C
ATOM 12 O2' C A2078 108.624 112.459 33.979 1.00 52.31 O
ATOM 13 C1' C A2078 108.460 110.515 35.345 1.00 51.07 C
ATOM 14 N1 C A2078 109.233 109.775 36.361 1.00 49.63 N
ATOM 15 C2 C A2078 109.601 110.437 37.544 1.00 49.17 C
ATOM 16 O2 C A2078 109.283 111.635 37.695 1.00 50.17 O
ATOM 17 N3 C A2078 110.289 109.756 38.491 1.00 48.12 N
ATOM 18 C4 C A2078 110.611 108.474 38.292 1.00 47.67 C
ATOM 19 N4 C A2078 111.284 107.841 39.256 1.00 48.57 N
ATOM 20 C5 C A2078 110.257 107.784 37.099 1.00 46.98 C
ATOM 21 C6 C A2078 109.579 108.464 36.168 1.00 48.34 C
ATOM 22 P U A2079 111.001 110.950 31.255 1.00 57.40 P
ATOM 23 OP1 U A2079 111.715 112.082 31.902 1.00 56.92 O
ATOM 24 OP2 U A2079 110.860 110.919 29.772 1.00 55.44 O
ATOM 25 O5' U A2079 111.724 109.604 31.689 1.00 55.36 O
TER
ATOM 1 O3' A B2104 116.812 108.105 39.157 1.00 63.25 O
ATOM 2 P C B2105 116.086 107.021 40.105 1.00 62.66 P
ATOM 3 OP1 C B2105 116.929 105.796 40.196 1.00 61.60 O
ATOM 4 OP2 C B2105 114.680 106.896 39.639 1.00 61.97 O
ATOM 5 O5' C B2105 116.065 107.757 41.523 1.00 60.89 O
ATOM 6 C5' C B2105 116.940 107.343 42.588 1.00 58.84 C
ATOM 7 C4' C B2105 117.440 108.537 43.372 1.00 57.54 C
ATOM 8 O4' C B2105 118.155 109.440 42.489 1.00 56.26 O
ATOM 9 C3' C B2105 116.414 109.458 44.010 1.00 57.41 C
ATOM 10 O3' C B2105 115.865 108.944 45.215 1.00 57.79 O
ATOM 11 C2' C B2105 117.251 110.699 44.291 1.00 56.40 C
ATOM 12 O2' C B2105 118.063 110.581 45.445 1.00 56.24 O
ATOM 13 C1' C B2105 118.130 110.749 43.041 1.00 54.36 C
ATOM 14 N1 C B2105 117.604 111.693 42.041 1.00 51.87 N
ATOM 15 C2 C B2105 117.695 113.066 42.312 1.00 51.82 C
ATOM 16 O2 C B2105 118.209 113.435 43.384 1.00 51.26 O
ATOM 17 N3 C B2105 117.220 113.952 41.407 1.00 51.65 N
ATOM 18 C4 C B2105 116.670 113.516 40.271 1.00 51.72 C
ATOM 19 N4 C B2105 116.218 114.429 39.409 1.00 52.30 N
ATOM 20 C5 C B2105 116.561 112.126 39.969 1.00 50.53 C
ATOM 21 C6 C B2105 117.037 111.258 40.874 1.00 51.28 C
ATOM 22 P A B2106 114.373 109.363 45.646 1.00 57.73 P
ATOM 23 OP1 A B2106 114.171 108.866 47.031 1.00 58.75 O
ATOM 24 OP2 A B2106 113.436 108.939 44.568 1.00 56.26 O
ATOM 25 O5' A B2106 114.413 110.955 45.701 1.00 53.34 O
TER
Atoms:
C2: (109.601,110.437,37.544)
OP1: (108.311,105.659,31.344)
OP2: (109.517,105.045,33.529)
C4: (110.611,108.474,38.292)
O5': (108.634,107.355,33.145)
C3': (109.324,110.259,33.162)
C1': (108.460,110.515,35.345)
O4': (107.635,109.597,34.643)
C5': (107.729,108.325,32.581)
P: (108.460,105.806,32.815)
O2: (109.283,111.635,37.695)
C4': (107.923,109.677,33.225)
C2': (109.303,111.263,34.309)
O2': (108.624,112.459,33.979)
N1: (109.233,109.775,36.361)
N3: (110.289,109.756,38.491)
N4: (111.284,107.841,39.256)
C6: (109.579,108.464,36.168)
C5: (110.257,107.784,37.099)
O3': (109.526,110.870,31.895)
OP1: (108.311,105.659,31.344)
OP2: (109.517,105.045,33.529)
C4: (110.611,108.474,38.292)
O5': (108.634,107.355,33.145)
C3': (109.324,110.259,33.162)
C1': (108.460,110.515,35.345)
O4': (107.635,109.597,34.643)
C5': (107.729,108.325,32.581)
P: (108.460,105.806,32.815)
O2: (109.283,111.635,37.695)
C4': (107.923,109.677,33.225)
C2': (109.303,111.263,34.309)
O2': (108.624,112.459,33.979)
N1: (109.233,109.775,36.361)
N3: (110.289,109.756,38.491)
N4: (111.284,107.841,39.256)
C6: (109.579,108.464,36.168)
C5: (110.257,107.784,37.099)
O3': (109.526,110.870,31.895)
C2: (117.695,113.066,42.312)
OP1: (116.929,105.796,40.196)
OP2: (114.680,106.896,39.639)
C4: (116.670,113.516,40.271)
O5': (116.065,107.757,41.523)
C3': (116.414,109.458,44.010)
C1': (118.130,110.749,43.041)
O4': (118.155,109.440,42.489)
C5': (116.940,107.343,42.588)
P: (116.086,107.021,40.105)
O2: (118.209,113.435,43.384)
C4': (117.440,108.537,43.372)
C2': (117.251,110.699,44.291)
O2': (118.063,110.581,45.445)
N1: (117.604,111.693,42.041)
N3: (117.220,113.952,41.407)
N4: (116.218,114.429,39.409)
C6: (117.037,111.258,40.874)
C5: (116.561,112.126,39.969)
O3': (115.865,108.944,45.215)
OP1: (116.929,105.796,40.196)
OP2: (114.680,106.896,39.639)
C4: (116.670,113.516,40.271)
O5': (116.065,107.757,41.523)
C3': (116.414,109.458,44.010)
C1': (118.130,110.749,43.041)
O4': (118.155,109.440,42.489)
C5': (116.940,107.343,42.588)
P: (116.086,107.021,40.105)
O2: (118.209,113.435,43.384)
C4': (117.440,108.537,43.372)
C2': (117.251,110.699,44.291)
O2': (118.063,110.581,45.445)
N1: (117.604,111.693,42.041)
N3: (117.220,113.952,41.407)
N4: (116.218,114.429,39.409)
C6: (117.037,111.258,40.874)
C5: (116.561,112.126,39.969)
O3': (115.865,108.944,45.215)
Image (generated by PyMOL):