Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02078:02105
Extra
PDB:
ATOM 1 O3' G A2077 106.859 105.458 33.362 1.00 45.25 O
ATOM 2 P C A2078 108.260 105.813 32.647 1.00 45.72 P
ATOM 3 OP1 C A2078 108.028 105.644 31.194 1.00 45.33 O
ATOM 4 OP2 C A2078 109.343 105.044 33.312 1.00 45.64 O
ATOM 5 O5' C A2078 108.467 107.365 32.940 1.00 45.07 O
ATOM 6 C5' C A2078 107.506 108.331 32.467 1.00 45.11 C
ATOM 7 C4' C A2078 107.742 109.680 33.108 1.00 44.99 C
ATOM 8 O4' C A2078 107.453 109.629 34.525 1.00 43.66 O
ATOM 9 C3' C A2078 109.157 110.223 33.033 1.00 45.92 C
ATOM 10 O3' C A2078 109.351 110.828 31.770 1.00 49.52 O
ATOM 11 C2' C A2078 109.167 111.243 34.162 1.00 44.95 C
ATOM 12 O2' C A2078 108.536 112.449 33.786 1.00 45.61 O
ATOM 13 C1' C A2078 108.294 110.544 35.209 1.00 43.94 C
ATOM 14 N1 C A2078 109.042 109.811 36.247 1.00 42.74 N
ATOM 15 C2 C A2078 109.403 110.483 37.424 1.00 43.16 C
ATOM 16 O2 C A2078 109.101 111.684 37.557 1.00 45.29 O
ATOM 17 N3 C A2078 110.070 109.809 38.386 1.00 42.19 N
ATOM 18 C4 C A2078 110.380 108.524 38.206 1.00 42.07 C
ATOM 19 N4 C A2078 111.033 107.895 39.184 1.00 44.10 N
ATOM 20 C5 C A2078 110.034 107.824 37.018 1.00 41.26 C
ATOM 21 C6 C A2078 109.373 108.496 36.075 1.00 41.07 C
ATOM 22 P U A2079 110.826 110.970 31.159 1.00 53.71 P
ATOM 23 OP1 U A2079 111.432 112.185 31.764 1.00 53.44 O
ATOM 24 OP2 U A2079 110.705 110.859 29.677 1.00 52.09 O
ATOM 25 O5' U A2079 111.622 109.696 31.680 1.00 51.68 O
TER
ATOM 1 O3' A B2104 116.575 108.091 39.105 1.00 59.66 O
ATOM 2 P C B2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 3 OP1 C B2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 4 OP2 C B2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 5 O5' C B2105 115.766 107.723 41.447 1.00 59.76 O
ATOM 6 C5' C B2105 116.586 107.310 42.558 1.00 59.14 C
ATOM 7 C4' C B2105 117.131 108.508 43.314 1.00 58.03 C
ATOM 8 O4' C B2105 117.880 109.379 42.424 1.00 57.43 O
ATOM 9 C3' C B2105 116.134 109.450 43.961 1.00 57.22 C
ATOM 10 O3' C B2105 115.642 108.923 45.186 1.00 56.26 O
ATOM 11 C2' C B2105 116.990 110.690 44.194 1.00 56.96 C
ATOM 12 O2' C B2105 117.844 110.578 45.313 1.00 57.53 O
ATOM 13 C1' C B2105 117.854 110.703 42.934 1.00 56.01 C
ATOM 14 N1 C B2105 117.345 111.619 41.898 1.00 56.27 N
ATOM 15 C2 C B2105 117.509 113.004 42.087 1.00 56.69 C
ATOM 16 O2 C B2105 118.064 113.411 43.120 1.00 56.74 O
ATOM 17 N3 C B2105 117.054 113.860 41.143 1.00 56.98 N
ATOM 18 C4 C B2105 116.453 113.387 40.049 1.00 57.34 C
ATOM 19 N4 C B2105 116.019 114.269 39.149 1.00 57.05 N
ATOM 20 C5 C B2105 116.268 111.987 39.832 1.00 56.77 C
ATOM 21 C6 C B2105 116.725 111.147 40.773 1.00 56.15 C
ATOM 22 P A B2106 114.164 109.309 45.682 1.00 55.56 P
ATOM 23 OP1 A B2106 114.030 108.821 47.080 1.00 56.11 O
ATOM 24 OP2 A B2106 113.197 108.856 44.650 1.00 54.88 O
ATOM 25 O5' A B2106 114.166 110.900 45.721 1.00 51.97 O
TER
ATOM 2 P C A2078 108.260 105.813 32.647 1.00 45.72 P
ATOM 3 OP1 C A2078 108.028 105.644 31.194 1.00 45.33 O
ATOM 4 OP2 C A2078 109.343 105.044 33.312 1.00 45.64 O
ATOM 5 O5' C A2078 108.467 107.365 32.940 1.00 45.07 O
ATOM 6 C5' C A2078 107.506 108.331 32.467 1.00 45.11 C
ATOM 7 C4' C A2078 107.742 109.680 33.108 1.00 44.99 C
ATOM 8 O4' C A2078 107.453 109.629 34.525 1.00 43.66 O
ATOM 9 C3' C A2078 109.157 110.223 33.033 1.00 45.92 C
ATOM 10 O3' C A2078 109.351 110.828 31.770 1.00 49.52 O
ATOM 11 C2' C A2078 109.167 111.243 34.162 1.00 44.95 C
ATOM 12 O2' C A2078 108.536 112.449 33.786 1.00 45.61 O
ATOM 13 C1' C A2078 108.294 110.544 35.209 1.00 43.94 C
ATOM 14 N1 C A2078 109.042 109.811 36.247 1.00 42.74 N
ATOM 15 C2 C A2078 109.403 110.483 37.424 1.00 43.16 C
ATOM 16 O2 C A2078 109.101 111.684 37.557 1.00 45.29 O
ATOM 17 N3 C A2078 110.070 109.809 38.386 1.00 42.19 N
ATOM 18 C4 C A2078 110.380 108.524 38.206 1.00 42.07 C
ATOM 19 N4 C A2078 111.033 107.895 39.184 1.00 44.10 N
ATOM 20 C5 C A2078 110.034 107.824 37.018 1.00 41.26 C
ATOM 21 C6 C A2078 109.373 108.496 36.075 1.00 41.07 C
ATOM 22 P U A2079 110.826 110.970 31.159 1.00 53.71 P
ATOM 23 OP1 U A2079 111.432 112.185 31.764 1.00 53.44 O
ATOM 24 OP2 U A2079 110.705 110.859 29.677 1.00 52.09 O
ATOM 25 O5' U A2079 111.622 109.696 31.680 1.00 51.68 O
TER
ATOM 1 O3' A B2104 116.575 108.091 39.105 1.00 59.66 O
ATOM 2 P C B2105 115.871 106.983 40.035 1.00 60.59 P
ATOM 3 OP1 C B2105 116.800 105.828 40.158 1.00 60.25 O
ATOM 4 OP2 C B2105 114.493 106.750 39.539 1.00 60.55 O
ATOM 5 O5' C B2105 115.766 107.723 41.447 1.00 59.76 O
ATOM 6 C5' C B2105 116.586 107.310 42.558 1.00 59.14 C
ATOM 7 C4' C B2105 117.131 108.508 43.314 1.00 58.03 C
ATOM 8 O4' C B2105 117.880 109.379 42.424 1.00 57.43 O
ATOM 9 C3' C B2105 116.134 109.450 43.961 1.00 57.22 C
ATOM 10 O3' C B2105 115.642 108.923 45.186 1.00 56.26 O
ATOM 11 C2' C B2105 116.990 110.690 44.194 1.00 56.96 C
ATOM 12 O2' C B2105 117.844 110.578 45.313 1.00 57.53 O
ATOM 13 C1' C B2105 117.854 110.703 42.934 1.00 56.01 C
ATOM 14 N1 C B2105 117.345 111.619 41.898 1.00 56.27 N
ATOM 15 C2 C B2105 117.509 113.004 42.087 1.00 56.69 C
ATOM 16 O2 C B2105 118.064 113.411 43.120 1.00 56.74 O
ATOM 17 N3 C B2105 117.054 113.860 41.143 1.00 56.98 N
ATOM 18 C4 C B2105 116.453 113.387 40.049 1.00 57.34 C
ATOM 19 N4 C B2105 116.019 114.269 39.149 1.00 57.05 N
ATOM 20 C5 C B2105 116.268 111.987 39.832 1.00 56.77 C
ATOM 21 C6 C B2105 116.725 111.147 40.773 1.00 56.15 C
ATOM 22 P A B2106 114.164 109.309 45.682 1.00 55.56 P
ATOM 23 OP1 A B2106 114.030 108.821 47.080 1.00 56.11 O
ATOM 24 OP2 A B2106 113.197 108.856 44.650 1.00 54.88 O
ATOM 25 O5' A B2106 114.166 110.900 45.721 1.00 51.97 O
TER
Atoms:
C2: (109.403,110.483,37.424)
OP1: (108.028,105.644,31.194)
OP2: (109.343,105.044,33.312)
C4: (110.380,108.524,38.206)
O5': (108.467,107.365,32.940)
C3': (109.157,110.223,33.033)
C1': (108.294,110.544,35.209)
O4': (107.453,109.629,34.525)
C5': (107.506,108.331,32.467)
P: (108.260,105.813,32.647)
O2: (109.101,111.684,37.557)
C4': (107.742,109.680,33.108)
C2': (109.167,111.243,34.162)
O2': (108.536,112.449,33.786)
N1: (109.042,109.811,36.247)
N3: (110.070,109.809,38.386)
N4: (111.033,107.895,39.184)
C6: (109.373,108.496,36.075)
C5: (110.034,107.824,37.018)
O3': (109.351,110.828,31.770)
OP1: (108.028,105.644,31.194)
OP2: (109.343,105.044,33.312)
C4: (110.380,108.524,38.206)
O5': (108.467,107.365,32.940)
C3': (109.157,110.223,33.033)
C1': (108.294,110.544,35.209)
O4': (107.453,109.629,34.525)
C5': (107.506,108.331,32.467)
P: (108.260,105.813,32.647)
O2: (109.101,111.684,37.557)
C4': (107.742,109.680,33.108)
C2': (109.167,111.243,34.162)
O2': (108.536,112.449,33.786)
N1: (109.042,109.811,36.247)
N3: (110.070,109.809,38.386)
N4: (111.033,107.895,39.184)
C6: (109.373,108.496,36.075)
C5: (110.034,107.824,37.018)
O3': (109.351,110.828,31.770)
C2: (117.509,113.004,42.087)
OP1: (116.800,105.828,40.158)
OP2: (114.493,106.750,39.539)
C4: (116.453,113.387,40.049)
O5': (115.766,107.723,41.447)
C3': (116.134,109.450,43.961)
C1': (117.854,110.703,42.934)
O4': (117.880,109.379,42.424)
C5': (116.586,107.310,42.558)
P: (115.871,106.983,40.035)
O2: (118.064,113.411,43.120)
C4': (117.131,108.508,43.314)
C2': (116.990,110.690,44.194)
O2': (117.844,110.578,45.313)
N1: (117.345,111.619,41.898)
N3: (117.054,113.860,41.143)
N4: (116.019,114.269,39.149)
C6: (116.725,111.147,40.773)
C5: (116.268,111.987,39.832)
O3': (115.642,108.923,45.186)
OP1: (116.800,105.828,40.158)
OP2: (114.493,106.750,39.539)
C4: (116.453,113.387,40.049)
O5': (115.766,107.723,41.447)
C3': (116.134,109.450,43.961)
C1': (117.854,110.703,42.934)
O4': (117.880,109.379,42.424)
C5': (116.586,107.310,42.558)
P: (115.871,106.983,40.035)
O2: (118.064,113.411,43.120)
C4': (117.131,108.508,43.314)
C2': (116.990,110.690,44.194)
O2': (117.844,110.578,45.313)
N1: (117.345,111.619,41.898)
N3: (117.054,113.860,41.143)
N4: (116.019,114.269,39.149)
C6: (116.725,111.147,40.773)
C5: (116.268,111.987,39.832)
O3': (115.642,108.923,45.186)
Image (generated by PyMOL):