Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:014:0506
Extra
PDB:
ATOM 1 O3' G A 13 36.659 143.183 71.165 1.00 31.89 O
ATOM 2 P G A 14 36.962 143.416 69.605 1.00 29.95 P
ATOM 3 OP1 G A 14 38.426 143.338 69.412 1.00 29.80 O
ATOM 4 OP2 G A 14 36.230 144.636 69.180 1.00 31.61 O
ATOM 5 O5' G A 14 36.296 142.165 68.887 1.00 27.24 O
ATOM 6 C5' G A 14 36.418 140.845 69.438 1.00 27.79 C
ATOM 7 C4' G A 14 35.302 139.977 68.924 1.00 28.11 C
ATOM 8 O4' G A 14 34.046 140.633 69.250 1.00 30.07 O
ATOM 9 C3' G A 14 35.287 139.785 67.412 1.00 27.51 C
ATOM 10 O3' G A 14 34.686 138.536 67.124 1.00 27.58 O
ATOM 11 C2' G A 14 34.388 140.921 66.955 1.00 28.29 C
ATOM 12 O2' G A 14 33.792 140.712 65.702 1.00 29.56 O
ATOM 13 C1' G A 14 33.341 140.921 68.061 1.00 31.10 C
ATOM 14 N9 G A 14 32.636 142.191 68.207 1.00 31.97 N
ATOM 15 C8 G A 14 33.147 143.450 68.011 1.00 32.78 C
ATOM 16 N7 G A 14 32.247 144.389 68.121 1.00 34.93 N
ATOM 17 C5 G A 14 31.075 143.711 68.425 1.00 32.24 C
ATOM 18 C6 G A 14 29.767 144.199 68.625 1.00 31.98 C
ATOM 19 O6 G A 14 29.361 145.361 68.552 1.00 34.05 O
ATOM 20 N1 G A 14 28.881 143.175 68.928 1.00 30.72 N
ATOM 21 C2 G A 14 29.212 141.850 69.019 1.00 31.53 C
ATOM 22 N2 G A 14 28.213 141.017 69.340 1.00 31.85 N
ATOM 23 N3 G A 14 30.429 141.378 68.812 1.00 30.38 N
ATOM 24 C4 G A 14 31.304 142.358 68.519 1.00 31.22 C
ATOM 25 P A A 15 35.033 137.770 65.755 1.00 30.38 P
ATOM 26 OP1 A A 15 36.490 137.528 65.670 1.00 31.02 O
ATOM 27 OP2 A A 15 34.351 138.471 64.651 1.00 33.01 O
ATOM 28 O5' A A 15 34.330 136.355 65.946 1.00 29.82 O
TER
ATOM 1 O3' U B 505 21.189 141.238 64.706 1.00 33.78 O
ATOM 2 P G B 506 20.920 141.922 66.130 1.00 37.91 P
ATOM 3 OP1 G B 506 19.825 141.145 66.764 1.00 36.10 O
ATOM 4 OP2 G B 506 20.778 143.392 65.947 1.00 34.83 O
ATOM 5 O5' G B 506 22.249 141.651 66.956 1.00 37.68 O
ATOM 6 C5' G B 506 22.767 140.324 67.080 1.00 37.36 C
ATOM 7 C4' G B 506 24.167 140.361 67.632 1.00 36.84 C
ATOM 8 O4' G B 506 25.070 140.964 66.652 1.00 37.31 O
ATOM 9 C3' G B 506 24.330 141.183 68.910 1.00 35.35 C
ATOM 10 O3' G B 506 25.205 140.500 69.799 1.00 35.90 O
ATOM 11 C2' G B 506 25.012 142.448 68.403 1.00 33.66 C
ATOM 12 O2' G B 506 25.766 143.125 69.382 1.00 31.96 O
ATOM 13 C1' G B 506 25.914 141.857 67.327 1.00 34.85 C
ATOM 14 N9 G B 506 26.502 142.817 66.399 1.00 34.82 N
ATOM 15 C8 G B 506 25.942 143.979 65.920 1.00 35.60 C
ATOM 16 N7 G B 506 26.789 144.721 65.259 1.00 34.99 N
ATOM 17 C5 G B 506 27.966 143.985 65.269 1.00 36.57 C
ATOM 18 C6 G B 506 29.246 144.292 64.745 1.00 36.83 C
ATOM 19 O6 G B 506 29.614 145.321 64.169 1.00 39.92 O
ATOM 20 N1 G B 506 30.150 143.256 64.961 1.00 36.26 N
ATOM 21 C2 G B 506 29.861 142.078 65.604 1.00 36.56 C
ATOM 22 N2 G B 506 30.861 141.193 65.705 1.00 34.12 N
ATOM 23 N3 G B 506 28.676 141.788 66.113 1.00 36.90 N
ATOM 24 C4 G B 506 27.785 142.782 65.918 1.00 36.07 C
ATOM 25 P A B 507 24.955 140.585 71.382 1.00 35.85 P
ATOM 26 OP1 A B 507 23.523 140.885 71.630 1.00 36.35 O
ATOM 27 OP2 A B 507 25.998 141.467 71.961 1.00 34.22 O
ATOM 28 O5' A B 507 25.209 139.096 71.866 1.00 34.86 O
TER
ATOM 2 P G A 14 36.962 143.416 69.605 1.00 29.95 P
ATOM 3 OP1 G A 14 38.426 143.338 69.412 1.00 29.80 O
ATOM 4 OP2 G A 14 36.230 144.636 69.180 1.00 31.61 O
ATOM 5 O5' G A 14 36.296 142.165 68.887 1.00 27.24 O
ATOM 6 C5' G A 14 36.418 140.845 69.438 1.00 27.79 C
ATOM 7 C4' G A 14 35.302 139.977 68.924 1.00 28.11 C
ATOM 8 O4' G A 14 34.046 140.633 69.250 1.00 30.07 O
ATOM 9 C3' G A 14 35.287 139.785 67.412 1.00 27.51 C
ATOM 10 O3' G A 14 34.686 138.536 67.124 1.00 27.58 O
ATOM 11 C2' G A 14 34.388 140.921 66.955 1.00 28.29 C
ATOM 12 O2' G A 14 33.792 140.712 65.702 1.00 29.56 O
ATOM 13 C1' G A 14 33.341 140.921 68.061 1.00 31.10 C
ATOM 14 N9 G A 14 32.636 142.191 68.207 1.00 31.97 N
ATOM 15 C8 G A 14 33.147 143.450 68.011 1.00 32.78 C
ATOM 16 N7 G A 14 32.247 144.389 68.121 1.00 34.93 N
ATOM 17 C5 G A 14 31.075 143.711 68.425 1.00 32.24 C
ATOM 18 C6 G A 14 29.767 144.199 68.625 1.00 31.98 C
ATOM 19 O6 G A 14 29.361 145.361 68.552 1.00 34.05 O
ATOM 20 N1 G A 14 28.881 143.175 68.928 1.00 30.72 N
ATOM 21 C2 G A 14 29.212 141.850 69.019 1.00 31.53 C
ATOM 22 N2 G A 14 28.213 141.017 69.340 1.00 31.85 N
ATOM 23 N3 G A 14 30.429 141.378 68.812 1.00 30.38 N
ATOM 24 C4 G A 14 31.304 142.358 68.519 1.00 31.22 C
ATOM 25 P A A 15 35.033 137.770 65.755 1.00 30.38 P
ATOM 26 OP1 A A 15 36.490 137.528 65.670 1.00 31.02 O
ATOM 27 OP2 A A 15 34.351 138.471 64.651 1.00 33.01 O
ATOM 28 O5' A A 15 34.330 136.355 65.946 1.00 29.82 O
TER
ATOM 1 O3' U B 505 21.189 141.238 64.706 1.00 33.78 O
ATOM 2 P G B 506 20.920 141.922 66.130 1.00 37.91 P
ATOM 3 OP1 G B 506 19.825 141.145 66.764 1.00 36.10 O
ATOM 4 OP2 G B 506 20.778 143.392 65.947 1.00 34.83 O
ATOM 5 O5' G B 506 22.249 141.651 66.956 1.00 37.68 O
ATOM 6 C5' G B 506 22.767 140.324 67.080 1.00 37.36 C
ATOM 7 C4' G B 506 24.167 140.361 67.632 1.00 36.84 C
ATOM 8 O4' G B 506 25.070 140.964 66.652 1.00 37.31 O
ATOM 9 C3' G B 506 24.330 141.183 68.910 1.00 35.35 C
ATOM 10 O3' G B 506 25.205 140.500 69.799 1.00 35.90 O
ATOM 11 C2' G B 506 25.012 142.448 68.403 1.00 33.66 C
ATOM 12 O2' G B 506 25.766 143.125 69.382 1.00 31.96 O
ATOM 13 C1' G B 506 25.914 141.857 67.327 1.00 34.85 C
ATOM 14 N9 G B 506 26.502 142.817 66.399 1.00 34.82 N
ATOM 15 C8 G B 506 25.942 143.979 65.920 1.00 35.60 C
ATOM 16 N7 G B 506 26.789 144.721 65.259 1.00 34.99 N
ATOM 17 C5 G B 506 27.966 143.985 65.269 1.00 36.57 C
ATOM 18 C6 G B 506 29.246 144.292 64.745 1.00 36.83 C
ATOM 19 O6 G B 506 29.614 145.321 64.169 1.00 39.92 O
ATOM 20 N1 G B 506 30.150 143.256 64.961 1.00 36.26 N
ATOM 21 C2 G B 506 29.861 142.078 65.604 1.00 36.56 C
ATOM 22 N2 G B 506 30.861 141.193 65.705 1.00 34.12 N
ATOM 23 N3 G B 506 28.676 141.788 66.113 1.00 36.90 N
ATOM 24 C4 G B 506 27.785 142.782 65.918 1.00 36.07 C
ATOM 25 P A B 507 24.955 140.585 71.382 1.00 35.85 P
ATOM 26 OP1 A B 507 23.523 140.885 71.630 1.00 36.35 O
ATOM 27 OP2 A B 507 25.998 141.467 71.961 1.00 34.22 O
ATOM 28 O5' A B 507 25.209 139.096 71.866 1.00 34.86 O
TER
Atoms:
OP1: (38.426,143.338,69.412)
OP2: (36.230,144.636,69.180)
C3': (35.287,139.785,67.412)
C1': (33.341,140.921,68.061)
C5': (36.418,140.845,69.438)
O6: (29.361,145.361,68.552)
O4': (34.046,140.633,69.250)
C8: (33.147,143.450,68.011)
C2: (29.212,141.850,69.019)
C6: (29.767,144.199,68.625)
C5: (31.075,143.711,68.425)
C4: (31.304,142.358,68.519)
P: (36.962,143.416,69.605)
C4': (35.302,139.977,68.924)
C2': (34.388,140.921,66.955)
O2': (33.792,140.712,65.702)
N1: (28.881,143.175,68.928)
N2: (28.213,141.017,69.340)
N3: (30.429,141.378,68.812)
N7: (32.247,144.389,68.121)
N9: (32.636,142.191,68.207)
O5': (36.296,142.165,68.887)
O3': (34.686,138.536,67.124)
OP2: (36.230,144.636,69.180)
C3': (35.287,139.785,67.412)
C1': (33.341,140.921,68.061)
C5': (36.418,140.845,69.438)
O6: (29.361,145.361,68.552)
O4': (34.046,140.633,69.250)
C8: (33.147,143.450,68.011)
C2: (29.212,141.850,69.019)
C6: (29.767,144.199,68.625)
C5: (31.075,143.711,68.425)
C4: (31.304,142.358,68.519)
P: (36.962,143.416,69.605)
C4': (35.302,139.977,68.924)
C2': (34.388,140.921,66.955)
O2': (33.792,140.712,65.702)
N1: (28.881,143.175,68.928)
N2: (28.213,141.017,69.340)
N3: (30.429,141.378,68.812)
N7: (32.247,144.389,68.121)
N9: (32.636,142.191,68.207)
O5': (36.296,142.165,68.887)
O3': (34.686,138.536,67.124)
OP1: (19.825,141.145,66.764)
OP2: (20.778,143.392,65.947)
C3': (24.330,141.183,68.910)
C1': (25.914,141.857,67.327)
C5': (22.767,140.324,67.080)
O6: (29.614,145.321,64.169)
O4': (25.070,140.964,66.652)
C8: (25.942,143.979,65.920)
C2: (29.861,142.078,65.604)
C6: (29.246,144.292,64.745)
C5: (27.966,143.985,65.269)
C4: (27.785,142.782,65.918)
P: (20.920,141.922,66.130)
C4': (24.167,140.361,67.632)
C2': (25.012,142.448,68.403)
O2': (25.766,143.125,69.382)
N1: (30.150,143.256,64.961)
N2: (30.861,141.193,65.705)
N3: (28.676,141.788,66.113)
N7: (26.789,144.721,65.259)
N9: (26.502,142.817,66.399)
O5': (22.249,141.651,66.956)
O3': (25.205,140.500,69.799)
OP2: (20.778,143.392,65.947)
C3': (24.330,141.183,68.910)
C1': (25.914,141.857,67.327)
C5': (22.767,140.324,67.080)
O6: (29.614,145.321,64.169)
O4': (25.070,140.964,66.652)
C8: (25.942,143.979,65.920)
C2: (29.861,142.078,65.604)
C6: (29.246,144.292,64.745)
C5: (27.966,143.985,65.269)
C4: (27.785,142.782,65.918)
P: (20.920,141.922,66.130)
C4': (24.167,140.361,67.632)
C2': (25.012,142.448,68.403)
O2': (25.766,143.125,69.382)
N1: (30.150,143.256,64.961)
N2: (30.861,141.193,65.705)
N3: (28.676,141.788,66.113)
N7: (26.789,144.721,65.259)
N9: (26.502,142.817,66.399)
O5': (22.249,141.651,66.956)
O3': (25.205,140.500,69.799)
Image (generated by PyMOL):