Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:069:087
Extra
PDB:
ATOM 1 O3' G A 68 31.352 150.028 20.118 1.00 67.57 O
ATOM 2 P G A 69 29.950 150.550 19.548 1.00 66.65 P
ATOM 3 OP1 G A 69 28.867 149.759 20.196 1.00 65.02 O
ATOM 4 OP2 G A 69 30.059 150.575 18.063 1.00 68.07 O
ATOM 5 O5' G A 69 29.860 152.033 20.113 1.00 64.22 O
ATOM 6 C5' G A 69 29.872 152.260 21.529 1.00 63.25 C
ATOM 7 C4' G A 69 30.197 153.697 21.827 1.00 62.10 C
ATOM 8 O4' G A 69 31.519 154.013 21.336 1.00 61.47 O
ATOM 9 C3' G A 69 29.282 154.718 21.185 1.00 61.62 C
ATOM 10 O3' G A 69 28.117 154.844 22.009 1.00 62.68 O
ATOM 11 C2' G A 69 30.171 155.955 21.135 1.00 61.55 C
ATOM 12 O2' G A 69 30.270 156.596 22.387 1.00 61.43 O
ATOM 13 C1' G A 69 31.537 155.333 20.838 1.00 62.12 C
ATOM 14 N9 G A 69 31.918 155.257 19.432 1.00 65.23 N
ATOM 15 C8 G A 69 31.445 154.367 18.497 1.00 66.27 C
ATOM 16 N7 G A 69 32.041 154.474 17.339 1.00 67.77 N
ATOM 17 C5 G A 69 32.949 155.513 17.511 1.00 68.26 C
ATOM 18 C6 G A 69 33.894 156.079 16.602 1.00 68.39 C
ATOM 19 O6 G A 69 34.131 155.754 15.432 1.00 68.33 O
ATOM 20 N1 G A 69 34.606 157.121 17.186 1.00 68.87 N
ATOM 21 C2 G A 69 34.440 157.567 18.474 1.00 69.06 C
ATOM 22 N2 G A 69 35.218 158.593 18.844 1.00 69.71 N
ATOM 23 N3 G A 69 33.575 157.046 19.334 1.00 68.82 N
ATOM 24 C4 G A 69 32.869 156.027 18.790 1.00 67.55 C
ATOM 25 P A A 70 27.072 156.045 21.775 1.00 64.15 P
ATOM 26 OP1 A A 70 25.770 155.649 22.359 1.00 63.42 O
ATOM 27 OP2 A A 70 27.146 156.445 20.343 1.00 66.29 O
ATOM 28 O5' A A 70 27.645 157.237 22.662 1.00 62.57 O
TER
ATOM 1 O3' A B 86 38.828 164.834 13.588 1.00 81.93 O
ATOM 2 P G B 87 38.635 163.247 13.731 1.00 81.08 P
ATOM 3 OP1 G B 87 39.935 162.650 14.135 1.00 80.72 O
ATOM 4 OP2 G B 87 37.977 162.787 12.486 1.00 82.50 O
ATOM 5 O5' G B 87 37.582 163.077 14.916 1.00 80.98 O
ATOM 6 C5' G B 87 37.957 163.296 16.290 1.00 79.70 C
ATOM 7 C4' G B 87 37.354 162.227 17.175 1.00 78.05 C
ATOM 8 O4' G B 87 35.905 162.330 17.132 1.00 78.62 O
ATOM 9 C3' G B 87 37.683 160.790 16.790 1.00 77.01 C
ATOM 10 O3' G B 87 37.747 160.005 17.970 1.00 76.24 O
ATOM 11 C2' G B 87 36.488 160.388 15.928 1.00 77.22 C
ATOM 12 O2' G B 87 36.258 158.993 15.891 1.00 73.90 O
ATOM 13 C1' G B 87 35.346 161.127 16.628 1.00 78.81 C
ATOM 14 N9 G B 87 34.253 161.494 15.732 1.00 80.73 N
ATOM 15 C8 G B 87 34.359 162.219 14.570 1.00 81.61 C
ATOM 16 N7 G B 87 33.213 162.420 13.984 1.00 82.64 N
ATOM 17 C5 G B 87 32.290 161.784 14.801 1.00 82.82 C
ATOM 18 C6 G B 87 30.882 161.663 14.671 1.00 84.09 C
ATOM 19 O6 G B 87 30.148 162.101 13.774 1.00 85.78 O
ATOM 20 N1 G B 87 30.332 160.942 15.723 1.00 84.07 N
ATOM 21 C2 G B 87 31.039 160.395 16.760 1.00 83.17 C
ATOM 22 N2 G B 87 30.315 159.724 17.668 1.00 81.79 N
ATOM 23 N3 G B 87 32.356 160.497 16.894 1.00 82.97 N
ATOM 24 C4 G B 87 32.913 161.202 15.884 1.00 81.88 C
ATOM 25 P A B 88 39.052 159.118 18.266 1.00 75.73 P
ATOM 26 OP1 A B 88 40.115 159.507 17.297 1.00 76.30 O
ATOM 27 OP2 A B 88 38.621 157.706 18.346 1.00 76.17 O
ATOM 28 O5' A B 88 39.503 159.580 19.720 1.00 74.09 O
TER
ATOM 2 P G A 69 29.950 150.550 19.548 1.00 66.65 P
ATOM 3 OP1 G A 69 28.867 149.759 20.196 1.00 65.02 O
ATOM 4 OP2 G A 69 30.059 150.575 18.063 1.00 68.07 O
ATOM 5 O5' G A 69 29.860 152.033 20.113 1.00 64.22 O
ATOM 6 C5' G A 69 29.872 152.260 21.529 1.00 63.25 C
ATOM 7 C4' G A 69 30.197 153.697 21.827 1.00 62.10 C
ATOM 8 O4' G A 69 31.519 154.013 21.336 1.00 61.47 O
ATOM 9 C3' G A 69 29.282 154.718 21.185 1.00 61.62 C
ATOM 10 O3' G A 69 28.117 154.844 22.009 1.00 62.68 O
ATOM 11 C2' G A 69 30.171 155.955 21.135 1.00 61.55 C
ATOM 12 O2' G A 69 30.270 156.596 22.387 1.00 61.43 O
ATOM 13 C1' G A 69 31.537 155.333 20.838 1.00 62.12 C
ATOM 14 N9 G A 69 31.918 155.257 19.432 1.00 65.23 N
ATOM 15 C8 G A 69 31.445 154.367 18.497 1.00 66.27 C
ATOM 16 N7 G A 69 32.041 154.474 17.339 1.00 67.77 N
ATOM 17 C5 G A 69 32.949 155.513 17.511 1.00 68.26 C
ATOM 18 C6 G A 69 33.894 156.079 16.602 1.00 68.39 C
ATOM 19 O6 G A 69 34.131 155.754 15.432 1.00 68.33 O
ATOM 20 N1 G A 69 34.606 157.121 17.186 1.00 68.87 N
ATOM 21 C2 G A 69 34.440 157.567 18.474 1.00 69.06 C
ATOM 22 N2 G A 69 35.218 158.593 18.844 1.00 69.71 N
ATOM 23 N3 G A 69 33.575 157.046 19.334 1.00 68.82 N
ATOM 24 C4 G A 69 32.869 156.027 18.790 1.00 67.55 C
ATOM 25 P A A 70 27.072 156.045 21.775 1.00 64.15 P
ATOM 26 OP1 A A 70 25.770 155.649 22.359 1.00 63.42 O
ATOM 27 OP2 A A 70 27.146 156.445 20.343 1.00 66.29 O
ATOM 28 O5' A A 70 27.645 157.237 22.662 1.00 62.57 O
TER
ATOM 1 O3' A B 86 38.828 164.834 13.588 1.00 81.93 O
ATOM 2 P G B 87 38.635 163.247 13.731 1.00 81.08 P
ATOM 3 OP1 G B 87 39.935 162.650 14.135 1.00 80.72 O
ATOM 4 OP2 G B 87 37.977 162.787 12.486 1.00 82.50 O
ATOM 5 O5' G B 87 37.582 163.077 14.916 1.00 80.98 O
ATOM 6 C5' G B 87 37.957 163.296 16.290 1.00 79.70 C
ATOM 7 C4' G B 87 37.354 162.227 17.175 1.00 78.05 C
ATOM 8 O4' G B 87 35.905 162.330 17.132 1.00 78.62 O
ATOM 9 C3' G B 87 37.683 160.790 16.790 1.00 77.01 C
ATOM 10 O3' G B 87 37.747 160.005 17.970 1.00 76.24 O
ATOM 11 C2' G B 87 36.488 160.388 15.928 1.00 77.22 C
ATOM 12 O2' G B 87 36.258 158.993 15.891 1.00 73.90 O
ATOM 13 C1' G B 87 35.346 161.127 16.628 1.00 78.81 C
ATOM 14 N9 G B 87 34.253 161.494 15.732 1.00 80.73 N
ATOM 15 C8 G B 87 34.359 162.219 14.570 1.00 81.61 C
ATOM 16 N7 G B 87 33.213 162.420 13.984 1.00 82.64 N
ATOM 17 C5 G B 87 32.290 161.784 14.801 1.00 82.82 C
ATOM 18 C6 G B 87 30.882 161.663 14.671 1.00 84.09 C
ATOM 19 O6 G B 87 30.148 162.101 13.774 1.00 85.78 O
ATOM 20 N1 G B 87 30.332 160.942 15.723 1.00 84.07 N
ATOM 21 C2 G B 87 31.039 160.395 16.760 1.00 83.17 C
ATOM 22 N2 G B 87 30.315 159.724 17.668 1.00 81.79 N
ATOM 23 N3 G B 87 32.356 160.497 16.894 1.00 82.97 N
ATOM 24 C4 G B 87 32.913 161.202 15.884 1.00 81.88 C
ATOM 25 P A B 88 39.052 159.118 18.266 1.00 75.73 P
ATOM 26 OP1 A B 88 40.115 159.507 17.297 1.00 76.30 O
ATOM 27 OP2 A B 88 38.621 157.706 18.346 1.00 76.17 O
ATOM 28 O5' A B 88 39.503 159.580 19.720 1.00 74.09 O
TER
Atoms:
OP1: (28.867,149.759,20.196)
OP2: (30.059,150.575,18.063)
C3': (29.282,154.718,21.185)
C1': (31.537,155.333,20.838)
C5': (29.872,152.260,21.529)
O6: (34.131,155.754,15.432)
O4': (31.519,154.013,21.336)
C8: (31.445,154.367,18.497)
C2: (34.440,157.567,18.474)
C6: (33.894,156.079,16.602)
C5: (32.949,155.513,17.511)
C4: (32.869,156.027,18.790)
P: (29.950,150.550,19.548)
C4': (30.197,153.697,21.827)
C2': (30.171,155.955,21.135)
O2': (30.270,156.596,22.387)
N1: (34.606,157.121,17.186)
N2: (35.218,158.593,18.844)
N3: (33.575,157.046,19.334)
N7: (32.041,154.474,17.339)
N9: (31.918,155.257,19.432)
O5': (29.860,152.033,20.113)
O3': (28.117,154.844,22.009)
OP2: (30.059,150.575,18.063)
C3': (29.282,154.718,21.185)
C1': (31.537,155.333,20.838)
C5': (29.872,152.260,21.529)
O6: (34.131,155.754,15.432)
O4': (31.519,154.013,21.336)
C8: (31.445,154.367,18.497)
C2: (34.440,157.567,18.474)
C6: (33.894,156.079,16.602)
C5: (32.949,155.513,17.511)
C4: (32.869,156.027,18.790)
P: (29.950,150.550,19.548)
C4': (30.197,153.697,21.827)
C2': (30.171,155.955,21.135)
O2': (30.270,156.596,22.387)
N1: (34.606,157.121,17.186)
N2: (35.218,158.593,18.844)
N3: (33.575,157.046,19.334)
N7: (32.041,154.474,17.339)
N9: (31.918,155.257,19.432)
O5': (29.860,152.033,20.113)
O3': (28.117,154.844,22.009)
OP1: (39.935,162.650,14.135)
OP2: (37.977,162.787,12.486)
C3': (37.683,160.790,16.790)
C1': (35.346,161.127,16.628)
C5': (37.957,163.296,16.290)
O6: (30.148,162.101,13.774)
O4': (35.905,162.330,17.132)
C8: (34.359,162.219,14.570)
C2: (31.039,160.395,16.760)
C6: (30.882,161.663,14.671)
C5: (32.290,161.784,14.801)
C4: (32.913,161.202,15.884)
P: (38.635,163.247,13.731)
C4': (37.354,162.227,17.175)
C2': (36.488,160.388,15.928)
O2': (36.258,158.993,15.891)
N1: (30.332,160.942,15.723)
N2: (30.315,159.724,17.668)
N3: (32.356,160.497,16.894)
N7: (33.213,162.420,13.984)
N9: (34.253,161.494,15.732)
O5': (37.582,163.077,14.916)
O3': (37.747,160.005,17.970)
OP2: (37.977,162.787,12.486)
C3': (37.683,160.790,16.790)
C1': (35.346,161.127,16.628)
C5': (37.957,163.296,16.290)
O6: (30.148,162.101,13.774)
O4': (35.905,162.330,17.132)
C8: (34.359,162.219,14.570)
C2: (31.039,160.395,16.760)
C6: (30.882,161.663,14.671)
C5: (32.290,161.784,14.801)
C4: (32.913,161.202,15.884)
P: (38.635,163.247,13.731)
C4': (37.354,162.227,17.175)
C2': (36.488,160.388,15.928)
O2': (36.258,158.993,15.891)
N1: (30.332,160.942,15.723)
N2: (30.315,159.724,17.668)
N3: (32.356,160.497,16.894)
N7: (33.213,162.420,13.984)
N9: (34.253,161.494,15.732)
O5': (37.582,163.077,14.916)
O3': (37.747,160.005,17.970)
Image (generated by PyMOL):