ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0925:0990

Extra

PDB:
ATOM 1 O3' C A 924 29.619 68.918 64.283 1.00 54.47 O
ATOM 2 P G A 925 28.138 68.340 64.051 1.00 55.49 P
ATOM 3 OP1 G A 925 28.285 67.204 63.115 1.00 55.26 O
ATOM 4 OP2 G A 925 27.202 69.448 63.724 1.00 54.63 O
ATOM 5 O5' G A 925 27.699 67.783 65.470 1.00 53.21 O
ATOM 6 C5' G A 925 28.634 67.130 66.333 1.00 54.18 C
ATOM 7 C4' G A 925 28.154 67.239 67.752 1.00 54.86 C
ATOM 8 O4' G A 925 28.086 68.655 68.095 1.00 54.26 O
ATOM 9 C3' G A 925 26.748 66.687 67.948 1.00 55.57 C
ATOM 10 O3' G A 925 26.595 66.119 69.245 1.00 57.68 O
ATOM 11 C2' G A 925 25.878 67.925 67.759 1.00 55.46 C
ATOM 12 O2' G A 925 24.595 67.853 68.354 1.00 53.87 O
ATOM 13 C1' G A 925 26.752 69.010 68.386 1.00 55.47 C
ATOM 14 N9 G A 925 26.493 70.347 67.854 1.00 55.43 N
ATOM 15 C8 G A 925 26.030 70.658 66.599 1.00 56.19 C
ATOM 16 N7 G A 925 25.825 71.934 66.429 1.00 56.59 N
ATOM 17 C5 G A 925 26.197 72.508 67.636 1.00 56.90 C
ATOM 18 C6 G A 925 26.195 73.872 68.048 1.00 57.01 C
ATOM 19 O6 G A 925 25.878 74.876 67.397 1.00 58.47 O
ATOM 20 N1 G A 925 26.633 74.010 69.360 1.00 55.77 N
ATOM 21 C2 G A 925 27.048 72.981 70.164 1.00 56.18 C
ATOM 22 N2 G A 925 27.443 73.324 71.393 1.00 55.85 N
ATOM 23 N3 G A 925 27.073 71.709 69.790 1.00 57.11 N
ATOM 24 C4 G A 925 26.629 71.545 68.523 1.00 56.72 C
ATOM 25 P A A 926 25.778 64.739 69.418 1.00 56.47 P
ATOM 26 OP1 A A 926 26.555 63.642 68.801 1.00 57.15 O
ATOM 27 OP2 A A 926 24.379 64.995 68.975 1.00 56.74 O
ATOM 28 O5' A A 926 25.742 64.495 70.990 1.00 58.73 O
TER

ATOM 1 O3' U B 989 22.260 80.280 74.591 1.00 60.57 O
ATOM 2 P G B 990 23.459 79.929 73.592 1.00 59.86 P
ATOM 3 OP1 G B 990 24.738 80.142 74.311 1.00 59.18 O
ATOM 4 OP2 G B 990 23.210 80.640 72.317 1.00 58.34 O
ATOM 5 O5' G B 990 23.273 78.369 73.339 1.00 58.55 O
ATOM 6 C5' G B 990 23.545 77.423 74.381 1.00 56.22 C
ATOM 7 C4' G B 990 24.499 76.370 73.877 1.00 56.70 C
ATOM 8 O4' G B 990 23.797 75.455 72.990 1.00 56.69 O
ATOM 9 C3' G B 990 25.681 76.901 73.073 1.00 55.55 C
ATOM 10 O3' G B 990 26.797 76.043 73.266 1.00 53.81 O
ATOM 11 C2' G B 990 25.188 76.757 71.639 1.00 55.30 C
ATOM 12 O2' G B 990 26.242 76.680 70.706 1.00 56.62 O
ATOM 13 C1' G B 990 24.441 75.430 71.733 1.00 55.27 C
ATOM 14 N9 G B 990 23.433 75.181 70.712 1.00 54.35 N
ATOM 15 C8 G B 990 22.525 76.072 70.197 1.00 53.22 C
ATOM 16 N7 G B 990 21.733 75.535 69.309 1.00 53.46 N
ATOM 17 C5 G B 990 22.150 74.214 69.229 1.00 54.25 C
ATOM 18 C6 G B 990 21.664 73.145 68.438 1.00 55.69 C
ATOM 19 O6 G B 990 20.742 73.152 67.617 1.00 60.24 O
ATOM 20 N1 G B 990 22.364 71.972 68.677 1.00 54.12 N
ATOM 21 C2 G B 990 23.396 71.839 69.559 1.00 53.78 C
ATOM 22 N2 G B 990 23.930 70.618 69.644 1.00 52.73 N
ATOM 23 N3 G B 990 23.867 72.827 70.302 1.00 53.49 N
ATOM 24 C4 G B 990 23.199 73.980 70.086 1.00 54.16 C
ATOM 25 P A B 991 28.280 76.621 73.106 1.00 53.69 P
ATOM 26 OP1 A B 991 28.140 78.038 72.686 1.00 54.50 O
ATOM 27 OP2 A B 991 29.069 75.681 72.267 1.00 52.28 O
ATOM 28 O5' A B 991 28.852 76.581 74.592 1.00 52.84 O
TER

Atoms:
OP1: (28.285,67.204,63.115)
OP2: (27.202,69.448,63.724)
C3': (26.748,66.687,67.948)
C1': (26.752,69.010,68.386)
C5': (28.634,67.130,66.333)
O6: (25.878,74.876,67.397)
O4': (28.086,68.655,68.095)
C8: (26.030,70.658,66.599)
C2: (27.048,72.981,70.164)
C6: (26.195,73.872,68.048)
C5: (26.197,72.508,67.636)
C4: (26.629,71.545,68.523)
P: (28.138,68.340,64.051)
C4': (28.154,67.239,67.752)
C2': (25.878,67.925,67.759)
O2': (24.595,67.853,68.354)
N1: (26.633,74.010,69.360)
N2: (27.443,73.324,71.393)
N3: (27.073,71.709,69.790)
N7: (25.825,71.934,66.429)
N9: (26.493,70.347,67.854)
O5': (27.699,67.783,65.470)
O3': (26.595,66.119,69.245)
OP1: (24.738,80.142,74.311)
OP2: (23.210,80.640,72.317)
C3': (25.681,76.901,73.073)
C1': (24.441,75.430,71.733)
C5': (23.545,77.423,74.381)
O6: (20.742,73.152,67.617)
O4': (23.797,75.455,72.990)
C8: (22.525,76.072,70.197)
C2: (23.396,71.839,69.559)
C6: (21.664,73.145,68.438)
C5: (22.150,74.214,69.229)
C4: (23.199,73.980,70.086)
P: (23.459,79.929,73.592)
C4': (24.499,76.370,73.877)
C2': (25.188,76.757,71.639)
O2': (26.242,76.680,70.706)
N1: (22.364,71.972,68.677)
N2: (23.930,70.618,69.644)
N3: (23.867,72.827,70.302)
N7: (21.733,75.535,69.309)
N9: (23.433,75.181,70.712)
O5': (23.273,78.369,73.339)
O3': (26.797,76.043,73.266)
Image (generated by PyMOL):
PyMOL image
show in jmol