ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UXC:A139:A160

Extra

PDB:
ATOM 1 O3' A A 138 107.271 28.070 -5.926 1.00 61.84 O
ATOM 2 P C A 139 108.319 27.506 -4.848 1.00 51.25 P
ATOM 3 OP1 C A 139 109.331 26.657 -5.551 1.00 65.47 O
ATOM 4 OP2 C A 139 107.563 26.949 -3.687 1.00 65.47 O
ATOM 5 O5' C A 139 109.065 28.806 -4.318 1.00 51.25 O
ATOM 6 C5' C A 139 110.139 29.417 -5.049 1.00 51.25 C
ATOM 7 C4' C A 139 110.793 30.442 -4.175 1.00 51.25 C
ATOM 8 O4' C A 139 109.759 31.342 -3.711 1.00 51.25 O
ATOM 9 C3' C A 139 111.398 29.873 -2.909 1.00 51.25 C
ATOM 10 O3' C A 139 112.738 29.513 -3.171 1.00 51.25 O
ATOM 11 C2' C A 139 111.294 31.025 -1.923 1.00 51.25 C
ATOM 12 O2' C A 139 112.364 31.931 -2.052 1.00 51.25 O
ATOM 13 C1' C A 139 110.011 31.718 -2.374 1.00 51.25 C
ATOM 14 N1 C A 139 108.816 31.422 -1.560 1.00 65.47 N
ATOM 15 C2 C A 139 108.570 32.198 -0.418 1.00 65.47 C
ATOM 16 O2 C A 139 109.354 33.116 -0.132 1.00 65.47 O
ATOM 17 N3 C A 139 107.484 31.933 0.339 1.00 65.47 N
ATOM 18 C4 C A 139 106.653 30.951 -0.008 1.00 65.47 C
ATOM 19 N4 C A 139 105.587 30.741 0.760 1.00 65.47 N
ATOM 20 C5 C A 139 106.876 30.146 -1.163 1.00 65.47 C
ATOM 21 C6 C A 139 107.958 30.413 -1.903 1.00 65.47 C
ATOM 22 P A A 140 113.625 28.828 -2.020 1.00 53.03 P
ATOM 23 OP1 A A 140 115.019 28.727 -2.571 1.00 61.08 O
ATOM 24 OP2 A A 140 112.929 27.602 -1.519 1.00 61.08 O
ATOM 25 O5' A A 140 113.612 29.899 -0.841 1.00 53.03 O
TER

ATOM 1 O3' U B 159 100.750 27.757 3.526 1.00 59.46 O
ATOM 2 P A B 160 100.139 29.002 2.727 1.00 58.25 P
ATOM 3 OP1 A B 160 98.657 28.859 2.713 1.00 70.77 O
ATOM 4 OP2 A B 160 100.881 29.124 1.442 1.00 70.77 O
ATOM 5 O5' A B 160 100.521 30.238 3.659 1.00 58.25 O
ATOM 6 C5' A B 160 99.949 30.363 4.983 1.00 58.25 C
ATOM 7 C4' A B 160 100.165 31.752 5.532 1.00 58.25 C
ATOM 8 O4' A B 160 101.537 31.904 5.962 1.00 58.25 O
ATOM 9 C3' A B 160 99.938 32.885 4.552 1.00 58.25 C
ATOM 10 O3' A B 160 98.577 33.246 4.443 1.00 58.25 O
ATOM 11 C2' A B 160 100.784 33.998 5.139 1.00 58.25 C
ATOM 12 O2' A B 160 100.124 34.638 6.216 1.00 58.25 O
ATOM 13 C1' A B 160 101.982 33.214 5.673 1.00 58.25 C
ATOM 14 N9 A B 160 103.085 33.110 4.713 1.00 70.77 N
ATOM 15 C8 A B 160 103.188 32.260 3.636 1.00 70.77 C
ATOM 16 N7 A B 160 104.324 32.360 2.989 1.00 70.77 N
ATOM 17 C5 A B 160 105.014 33.347 3.678 1.00 70.77 C
ATOM 18 C6 A B 160 106.290 33.905 3.503 1.00 70.77 C
ATOM 19 N6 A B 160 107.149 33.508 2.563 1.00 70.77 N
ATOM 20 N1 A B 160 106.667 34.890 4.348 1.00 70.77 N
ATOM 21 C2 A B 160 105.820 35.268 5.309 1.00 70.77 C
ATOM 22 N3 A B 160 104.606 34.809 5.588 1.00 70.77 N
ATOM 23 C4 A B 160 104.255 33.836 4.727 1.00 70.77 C
ATOM 24 P A B 161 98.072 33.988 3.112 1.00 61.00 P
ATOM 25 OP1 A B 161 96.587 34.041 3.102 1.00 51.86 O
ATOM 26 OP2 A B 161 98.790 33.368 1.959 1.00 51.86 O
ATOM 27 O5' A B 161 98.605 35.474 3.325 1.00 61.00 O
TER

Atoms:
C2: (108.570,32.198,-0.418)
OP1: (109.331,26.657,-5.551)
OP2: (107.563,26.949,-3.687)
C4: (106.653,30.951,-0.008)
O5': (109.065,28.806,-4.318)
C3': (111.398,29.873,-2.909)
C1': (110.011,31.718,-2.374)
O4': (109.759,31.342,-3.711)
C5': (110.139,29.417,-5.049)
P: (108.319,27.506,-4.848)
O2: (109.354,33.116,-0.132)
C4': (110.793,30.442,-4.175)
C2': (111.294,31.025,-1.923)
O2': (112.364,31.931,-2.052)
N1: (108.816,31.422,-1.560)
N3: (107.484,31.933,0.339)
N4: (105.587,30.741,0.760)
C6: (107.958,30.413,-1.903)
C5: (106.876,30.146,-1.163)
O3': (112.738,29.513,-3.171)
OP1: (98.657,28.859,2.713)
OP2: (100.881,29.124,1.442)
C3': (99.938,32.885,4.552)
C1': (101.982,33.214,5.673)
C5': (99.949,30.363,4.983)
O4': (101.537,31.904,5.962)
C8: (103.188,32.260,3.636)
O2': (100.124,34.638,6.216)
C6: (106.290,33.905,3.503)
C5: (105.014,33.347,3.678)
C4: (104.255,33.836,4.727)
P: (100.139,29.002,2.727)
C4': (100.165,31.752,5.532)
C2': (100.784,33.998,5.139)
C2: (105.820,35.268,5.309)
N1: (106.667,34.890,4.348)
N3: (104.606,34.809,5.588)
N6: (107.149,33.508,2.563)
N7: (104.324,32.360,2.989)
N9: (103.085,33.110,4.713)
O5': (100.521,30.238,3.659)
O3': (98.577,33.246,4.443)
Image (generated by PyMOL):
PyMOL image
show in jmol