ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1DUL:B33:B18

Extra

PDB:
ATOM 1 O3' G A 32 35.518 8.887 7.762 1.00 20.72 O
ATOM 2 P C A 33 36.213 9.857 8.842 1.00 21.52 P
ATOM 3 OP1 C A 33 37.679 9.753 8.598 1.00 22.75 O
ATOM 4 OP2 C A 33 35.666 9.649 10.199 1.00 22.12 O
ATOM 5 O5' C A 33 35.719 11.323 8.418 1.00 22.24 O
ATOM 6 C5' C A 33 36.216 11.944 7.230 1.00 20.03 C
ATOM 7 C4' C A 33 35.492 13.245 6.963 1.00 19.39 C
ATOM 8 O4' C A 33 34.089 12.971 6.708 1.00 18.19 O
ATOM 9 C3' C A 33 35.437 14.261 8.095 1.00 18.16 C
ATOM 10 O3' C A 33 36.643 15.003 8.212 1.00 19.47 O
ATOM 11 C2' C A 33 34.278 15.133 7.647 1.00 19.78 C
ATOM 12 O2' C A 33 34.642 16.010 6.582 1.00 18.74 O
ATOM 13 C1' C A 33 33.306 14.070 7.137 1.00 19.22 C
ATOM 14 N1 C A 33 32.403 13.621 8.210 1.00 19.85 N
ATOM 15 C2 C A 33 31.286 14.397 8.483 1.00 21.30 C
ATOM 16 O2 C A 33 31.081 15.404 7.783 1.00 20.31 O
ATOM 17 N3 C A 33 30.455 14.041 9.500 1.00 21.36 N
ATOM 18 C4 C A 33 30.719 12.949 10.219 1.00 19.98 C
ATOM 19 N4 C A 33 29.873 12.635 11.208 1.00 19.17 N
ATOM 20 C5 C A 33 31.854 12.131 9.955 1.00 17.94 C
ATOM 21 C6 C A 33 32.660 12.495 8.943 1.00 18.60 C
ATOM 22 P A A 34 37.069 15.620 9.644 1.00 18.88 P
ATOM 23 OP1 A A 34 38.359 16.338 9.475 1.00 17.91 O
ATOM 24 OP2 A A 34 36.966 14.537 10.675 1.00 18.45 O
ATOM 25 O5' A A 34 35.927 16.675 9.955 1.00 18.25 O
TER

ATOM 1 O3' C B 17 26.413 9.677 14.982 1.00 27.56 O
ATOM 2 P A B 18 25.517 9.768 13.660 1.00 29.37 P
ATOM 3 OP1 A B 18 24.385 8.813 13.835 1.00 29.54 O
ATOM 4 OP2 A B 18 26.404 9.642 12.471 1.00 27.36 O
ATOM 5 O5' A B 18 24.922 11.245 13.725 1.00 28.81 O
ATOM 6 C5' A B 18 24.110 11.653 14.827 1.00 29.90 C
ATOM 7 C4' A B 18 23.730 13.110 14.698 1.00 29.05 C
ATOM 8 O4' A B 18 24.902 13.944 14.873 1.00 26.73 O
ATOM 9 C3' A B 18 23.185 13.546 13.351 1.00 29.29 C
ATOM 10 O3' A B 18 21.812 13.240 13.224 1.00 30.26 O
ATOM 11 C2' A B 18 23.405 15.048 13.400 1.00 28.79 C
ATOM 12 O2' A B 18 22.440 15.718 14.185 1.00 28.11 O
ATOM 13 C1' A B 18 24.770 15.115 14.079 1.00 27.60 C
ATOM 14 N9 A B 18 25.831 15.105 13.077 1.00 25.12 N
ATOM 15 C8 A B 18 26.675 14.085 12.722 1.00 23.79 C
ATOM 16 N7 A B 18 27.522 14.411 11.771 1.00 24.06 N
ATOM 17 C5 A B 18 27.209 15.734 11.486 1.00 22.99 C
ATOM 18 C6 A B 18 27.754 16.671 10.580 1.00 23.29 C
ATOM 19 N6 A B 18 28.768 16.406 9.760 1.00 20.36 N
ATOM 20 N1 A B 18 27.215 17.908 10.558 1.00 22.92 N
ATOM 21 C2 A B 18 26.200 18.181 11.391 1.00 25.50 C
ATOM 22 N3 A B 18 25.608 17.391 12.284 1.00 23.64 N
ATOM 23 C4 A B 18 26.169 16.170 12.281 1.00 23.50 C
ATOM 24 P G B 19 21.289 12.530 11.891 1.00 30.91 P
ATOM 25 OP1 G B 19 19.810 12.414 12.001 1.00 32.15 O
ATOM 26 OP2 G B 19 22.112 11.319 11.687 1.00 31.15 O
ATOM 27 O5' G B 19 21.614 13.577 10.735 1.00 30.02 O
TER

Atoms:
C2: (31.286,14.397,8.483)
OP1: (37.679,9.753,8.598)
OP2: (35.666,9.649,10.199)
C4: (30.719,12.949,10.219)
O5': (35.719,11.323,8.418)
C3': (35.437,14.261,8.095)
C1': (33.306,14.070,7.137)
O4': (34.089,12.971,6.708)
C5': (36.216,11.944,7.230)
P: (36.213,9.857,8.842)
O2: (31.081,15.404,7.783)
C4': (35.492,13.245,6.963)
C2': (34.278,15.133,7.647)
O2': (34.642,16.010,6.582)
N1: (32.403,13.621,8.210)
N3: (30.455,14.041,9.500)
N4: (29.873,12.635,11.208)
C6: (32.660,12.495,8.943)
C5: (31.854,12.131,9.955)
O3': (36.643,15.003,8.212)
OP1: (24.385,8.813,13.835)
OP2: (26.404,9.642,12.471)
C3': (23.185,13.546,13.351)
C1': (24.770,15.115,14.079)
C5': (24.110,11.653,14.827)
O4': (24.902,13.944,14.873)
C8: (26.675,14.085,12.722)
O2': (22.440,15.718,14.185)
C6: (27.754,16.671,10.580)
C5: (27.209,15.734,11.486)
C4: (26.169,16.170,12.281)
P: (25.517,9.768,13.660)
C4': (23.730,13.110,14.698)
C2': (23.405,15.048,13.400)
C2: (26.200,18.181,11.391)
N1: (27.215,17.908,10.558)
N3: (25.608,17.391,12.284)
N6: (28.768,16.406,9.760)
N7: (27.522,14.411,11.771)
N9: (25.831,15.105,13.077)
O5': (24.922,11.245,13.725)
O3': (21.812,13.240,13.224)
Image (generated by PyMOL):
PyMOL image
show in jmol