ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A734:A712

Extra

PDB:
ATOM 1 O3' G A 733 -27.770 -9.680 2.270 1.00 11.11 O
ATOM 2 P G A 734 -27.447 -11.252 2.367 1.00 57.37 P
ATOM 3 OP1 G A 734 -26.562 -11.422 3.548 1.00 57.15 O
ATOM 4 OP2 G A 734 -26.992 -11.741 1.044 1.00 57.18 O
ATOM 5 O5' G A 734 -28.867 -11.901 2.693 1.00 17.42 O
ATOM 6 C5' G A 734 -29.638 -11.428 3.822 1.00 17.42 C
ATOM 7 C4' G A 734 -31.107 -11.637 3.580 1.00 17.42 C
ATOM 8 O4' G A 734 -31.421 -11.125 2.258 1.00 17.42 O
ATOM 9 C3' G A 734 -31.589 -13.083 3.610 1.00 17.42 C
ATOM 10 O3' G A 734 -32.907 -13.112 4.151 1.00 17.42 O
ATOM 11 C2' G A 734 -31.657 -13.454 2.138 1.00 17.42 C
ATOM 12 O2' G A 734 -32.645 -14.416 1.865 1.00 17.42 O
ATOM 13 C1' G A 734 -32.061 -12.128 1.508 1.00 17.42 C
ATOM 14 N9 G A 734 -31.688 -12.005 0.102 1.00 23.41 N
ATOM 15 C8 G A 734 -30.549 -12.465 -0.511 1.00 23.41 C
ATOM 16 N7 G A 734 -30.566 -12.306 -1.805 1.00 23.41 N
ATOM 17 C5 G A 734 -31.778 -11.683 -2.054 1.00 23.41 C
ATOM 18 C6 G A 734 -32.369 -11.288 -3.275 1.00 23.41 C
ATOM 19 O6 G A 734 -31.939 -11.426 -4.423 1.00 23.41 O
ATOM 20 N1 G A 734 -33.590 -10.680 -3.072 1.00 23.41 N
ATOM 21 C2 G A 734 -34.173 -10.471 -1.853 1.00 23.41 C
ATOM 22 N2 G A 734 -35.358 -9.822 -1.866 1.00 23.41 N
ATOM 23 N3 G A 734 -33.644 -10.857 -0.706 1.00 23.41 N
ATOM 24 C4 G A 734 -32.458 -11.454 -0.883 1.00 23.41 C
ATOM 25 P A A 735 -33.421 -14.409 4.958 1.00 19.56 P
ATOM 26 OP1 A A 735 -32.587 -14.563 6.189 1.00 30.31 O
ATOM 27 OP2 A A 735 -33.595 -15.566 4.037 1.00 30.31 O
ATOM 28 O5' A A 735 -34.872 -13.967 5.419 1.00 9.27 O
TER

ATOM 1 O3' U B 711 -39.497 -13.723 -8.710 1.00 28.86 O
ATOM 2 P G B 712 -38.722 -12.323 -8.859 1.00 32.09 P
ATOM 3 OP1 G B 712 -39.736 -11.367 -9.374 1.00 34.57 O
ATOM 4 OP2 G B 712 -37.457 -12.544 -9.610 1.00 34.57 O
ATOM 5 O5' G B 712 -38.371 -11.878 -7.376 1.00 26.87 O
ATOM 6 C5' G B 712 -39.417 -11.479 -6.485 1.00 26.87 C
ATOM 7 C4' G B 712 -38.851 -11.127 -5.132 1.00 26.87 C
ATOM 8 O4' G B 712 -38.075 -12.247 -4.621 1.00 26.87 O
ATOM 9 C3' G B 712 -37.934 -9.913 -5.093 1.00 26.87 C
ATOM 10 O3' G B 712 -38.157 -9.251 -3.849 1.00 26.87 O
ATOM 11 C2' G B 712 -36.545 -10.541 -5.105 1.00 26.87 C
ATOM 12 O2' G B 712 -35.554 -9.718 -4.528 1.00 26.87 O
ATOM 13 C1' G B 712 -36.778 -11.810 -4.284 1.00 26.87 C
ATOM 14 N9 G B 712 -35.836 -12.889 -4.564 1.00 45.82 N
ATOM 15 C8 G B 712 -35.540 -13.435 -5.788 1.00 45.82 C
ATOM 16 N7 G B 712 -34.632 -14.371 -5.723 1.00 45.82 N
ATOM 17 C5 G B 712 -34.315 -14.451 -4.376 1.00 45.82 C
ATOM 18 C6 G B 712 -33.389 -15.282 -3.701 1.00 45.82 C
ATOM 19 O6 G B 712 -32.631 -16.135 -4.170 1.00 45.82 O
ATOM 20 N1 G B 712 -33.392 -15.043 -2.341 1.00 45.82 N
ATOM 21 C2 G B 712 -34.182 -14.123 -1.709 1.00 45.82 C
ATOM 22 N2 G B 712 -34.039 -14.044 -0.387 1.00 45.82 N
ATOM 23 N3 G B 712 -35.045 -13.338 -2.324 1.00 45.82 N
ATOM 24 C4 G B 712 -35.058 -13.552 -3.647 1.00 45.82 C
ATOM 25 P A B 713 -37.801 -7.694 -3.681 1.00 16.46 P
ATOM 26 OP1 A B 713 -38.399 -6.946 -4.814 1.00 21.92 O
ATOM 27 OP2 A B 713 -36.347 -7.547 -3.392 1.00 21.92 O
ATOM 28 O5' A B 713 -38.598 -7.309 -2.359 1.00 9.85 O
TER

Atoms:
OP1: (-26.562,-11.422,3.548)
OP2: (-26.992,-11.741,1.044)
C3': (-31.589,-13.083,3.610)
C1': (-32.061,-12.128,1.508)
C5': (-29.638,-11.428,3.822)
O6: (-31.939,-11.426,-4.423)
O4': (-31.421,-11.125,2.258)
C8: (-30.549,-12.465,-0.511)
C2: (-34.173,-10.471,-1.853)
C6: (-32.369,-11.288,-3.275)
C5: (-31.778,-11.683,-2.054)
C4: (-32.458,-11.454,-0.883)
P: (-27.447,-11.252,2.367)
C4': (-31.107,-11.637,3.580)
C2': (-31.657,-13.454,2.138)
O2': (-32.645,-14.416,1.865)
N1: (-33.590,-10.680,-3.072)
N2: (-35.358,-9.822,-1.866)
N3: (-33.644,-10.857,-0.706)
N7: (-30.566,-12.306,-1.805)
N9: (-31.688,-12.005,0.102)
O5': (-28.867,-11.901,2.693)
O3': (-32.907,-13.112,4.151)
OP1: (-39.736,-11.367,-9.374)
OP2: (-37.457,-12.544,-9.610)
C3': (-37.934,-9.913,-5.093)
C1': (-36.778,-11.810,-4.284)
C5': (-39.417,-11.479,-6.485)
O6: (-32.631,-16.135,-4.170)
O4': (-38.075,-12.247,-4.621)
C8: (-35.540,-13.435,-5.788)
C2: (-34.182,-14.123,-1.709)
C6: (-33.389,-15.282,-3.701)
C5: (-34.315,-14.451,-4.376)
C4: (-35.058,-13.552,-3.647)
P: (-38.722,-12.323,-8.859)
C4': (-38.851,-11.127,-5.132)
C2': (-36.545,-10.541,-5.105)
O2': (-35.554,-9.718,-4.528)
N1: (-33.392,-15.043,-2.341)
N2: (-34.039,-14.044,-0.387)
N3: (-35.045,-13.338,-2.324)
N7: (-34.632,-14.371,-5.723)
N9: (-35.836,-12.889,-4.564)
O5': (-38.371,-11.878,-7.376)
O3': (-38.157,-9.251,-3.849)
Image (generated by PyMOL):
PyMOL image
show in jmol