Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0988:01232
Extra
PDB:
ATOM 1 O3' U A 987 19.063 71.645 71.126 1.00 74.79 O
ATOM 2 P U A 988 17.513 72.029 70.901 1.00 78.01 P
ATOM 3 OP1 U A 988 16.864 72.375 72.192 1.00 77.36 O
ATOM 4 OP2 U A 988 16.938 70.951 70.054 1.00 79.25 O
ATOM 5 O5' U A 988 17.565 73.358 70.021 1.00 78.98 O
ATOM 6 C5' U A 988 17.878 74.627 70.627 1.00 78.81 C
ATOM 7 C4' U A 988 17.460 75.772 69.728 1.00 77.77 C
ATOM 8 O4' U A 988 16.128 75.532 69.191 1.00 79.33 O
ATOM 9 C3' U A 988 17.378 77.110 70.451 1.00 76.95 C
ATOM 10 O3' U A 988 17.648 78.180 69.546 1.00 73.97 O
ATOM 11 C2' U A 988 15.913 77.152 70.865 1.00 77.86 C
ATOM 12 O2' U A 988 15.460 78.458 71.150 1.00 77.49 O
ATOM 13 C1' U A 988 15.249 76.555 69.622 1.00 80.00 C
ATOM 14 N1 U A 988 13.910 75.973 69.828 1.00 82.51 N
ATOM 15 C2 U A 988 12.801 76.786 69.596 1.00 83.38 C
ATOM 16 O2 U A 988 12.885 77.948 69.228 1.00 83.24 O
ATOM 17 N3 U A 988 11.585 76.183 69.812 1.00 85.05 N
ATOM 18 C4 U A 988 11.357 74.880 70.219 1.00 86.01 C
ATOM 19 O4 U A 988 10.195 74.485 70.366 1.00 85.86 O
ATOM 20 C5 U A 988 12.546 74.102 70.432 1.00 85.20 C
ATOM 21 C6 U A 988 13.750 74.660 70.237 1.00 83.68 C
ATOM 22 P U A 989 19.089 78.897 69.549 1.00 72.12 P
ATOM 23 OP1 U A 989 18.891 80.315 69.143 1.00 72.73 O
ATOM 24 OP2 U A 989 20.007 78.027 68.762 1.00 71.89 O
ATOM 25 O5' U A 989 19.567 78.873 71.071 1.00 69.46 O
TER
ATOM 1 O3' C B1231 15.328 81.612 72.188 1.00 57.99 O
ATOM 2 P C B1232 14.358 81.595 70.901 1.00 58.67 P
ATOM 3 OP1 C B1232 14.756 80.445 70.049 1.00 57.46 O
ATOM 4 OP2 C B1232 14.313 82.962 70.310 1.00 57.50 O
ATOM 5 O5' C B1232 12.922 81.294 71.516 1.00 56.77 O
ATOM 6 C5' C B1232 12.671 80.079 72.240 1.00 55.58 C
ATOM 7 C4' C B1232 11.228 80.023 72.673 1.00 55.35 C
ATOM 8 O4' C B1232 10.954 81.096 73.613 1.00 56.20 O
ATOM 9 C3' C B1232 10.224 80.254 71.559 1.00 56.07 C
ATOM 10 O3' C B1232 10.012 79.073 70.799 1.00 56.67 O
ATOM 11 C2' C B1232 8.991 80.719 72.323 1.00 55.62 C
ATOM 12 O2' C B1232 8.275 79.665 72.931 1.00 56.17 O
ATOM 13 C1' C B1232 9.630 81.576 73.417 1.00 54.84 C
ATOM 14 N1 C B1232 9.685 83.010 73.071 1.00 53.88 N
ATOM 15 C2 C B1232 8.546 83.803 73.295 1.00 53.53 C
ATOM 16 O2 C B1232 7.525 83.277 73.760 1.00 54.11 O
ATOM 17 N3 C B1232 8.585 85.119 72.995 1.00 52.33 N
ATOM 18 C4 C B1232 9.693 85.652 72.485 1.00 52.13 C
ATOM 19 N4 C B1232 9.680 86.954 72.207 1.00 51.30 N
ATOM 20 C5 C B1232 10.865 84.871 72.237 1.00 52.81 C
ATOM 21 C6 C B1232 10.817 83.568 72.542 1.00 52.65 C
ATOM 22 P A B1233 9.475 79.187 69.293 1.00 56.48 P
ATOM 23 OP1 A B1233 9.408 77.804 68.771 1.00 59.00 O
ATOM 24 OP2 A B1233 10.271 80.201 68.567 1.00 57.23 O
ATOM 25 O5' A B1233 7.994 79.742 69.468 1.00 55.60 O
TER
ATOM 2 P U A 988 17.513 72.029 70.901 1.00 78.01 P
ATOM 3 OP1 U A 988 16.864 72.375 72.192 1.00 77.36 O
ATOM 4 OP2 U A 988 16.938 70.951 70.054 1.00 79.25 O
ATOM 5 O5' U A 988 17.565 73.358 70.021 1.00 78.98 O
ATOM 6 C5' U A 988 17.878 74.627 70.627 1.00 78.81 C
ATOM 7 C4' U A 988 17.460 75.772 69.728 1.00 77.77 C
ATOM 8 O4' U A 988 16.128 75.532 69.191 1.00 79.33 O
ATOM 9 C3' U A 988 17.378 77.110 70.451 1.00 76.95 C
ATOM 10 O3' U A 988 17.648 78.180 69.546 1.00 73.97 O
ATOM 11 C2' U A 988 15.913 77.152 70.865 1.00 77.86 C
ATOM 12 O2' U A 988 15.460 78.458 71.150 1.00 77.49 O
ATOM 13 C1' U A 988 15.249 76.555 69.622 1.00 80.00 C
ATOM 14 N1 U A 988 13.910 75.973 69.828 1.00 82.51 N
ATOM 15 C2 U A 988 12.801 76.786 69.596 1.00 83.38 C
ATOM 16 O2 U A 988 12.885 77.948 69.228 1.00 83.24 O
ATOM 17 N3 U A 988 11.585 76.183 69.812 1.00 85.05 N
ATOM 18 C4 U A 988 11.357 74.880 70.219 1.00 86.01 C
ATOM 19 O4 U A 988 10.195 74.485 70.366 1.00 85.86 O
ATOM 20 C5 U A 988 12.546 74.102 70.432 1.00 85.20 C
ATOM 21 C6 U A 988 13.750 74.660 70.237 1.00 83.68 C
ATOM 22 P U A 989 19.089 78.897 69.549 1.00 72.12 P
ATOM 23 OP1 U A 989 18.891 80.315 69.143 1.00 72.73 O
ATOM 24 OP2 U A 989 20.007 78.027 68.762 1.00 71.89 O
ATOM 25 O5' U A 989 19.567 78.873 71.071 1.00 69.46 O
TER
ATOM 1 O3' C B1231 15.328 81.612 72.188 1.00 57.99 O
ATOM 2 P C B1232 14.358 81.595 70.901 1.00 58.67 P
ATOM 3 OP1 C B1232 14.756 80.445 70.049 1.00 57.46 O
ATOM 4 OP2 C B1232 14.313 82.962 70.310 1.00 57.50 O
ATOM 5 O5' C B1232 12.922 81.294 71.516 1.00 56.77 O
ATOM 6 C5' C B1232 12.671 80.079 72.240 1.00 55.58 C
ATOM 7 C4' C B1232 11.228 80.023 72.673 1.00 55.35 C
ATOM 8 O4' C B1232 10.954 81.096 73.613 1.00 56.20 O
ATOM 9 C3' C B1232 10.224 80.254 71.559 1.00 56.07 C
ATOM 10 O3' C B1232 10.012 79.073 70.799 1.00 56.67 O
ATOM 11 C2' C B1232 8.991 80.719 72.323 1.00 55.62 C
ATOM 12 O2' C B1232 8.275 79.665 72.931 1.00 56.17 O
ATOM 13 C1' C B1232 9.630 81.576 73.417 1.00 54.84 C
ATOM 14 N1 C B1232 9.685 83.010 73.071 1.00 53.88 N
ATOM 15 C2 C B1232 8.546 83.803 73.295 1.00 53.53 C
ATOM 16 O2 C B1232 7.525 83.277 73.760 1.00 54.11 O
ATOM 17 N3 C B1232 8.585 85.119 72.995 1.00 52.33 N
ATOM 18 C4 C B1232 9.693 85.652 72.485 1.00 52.13 C
ATOM 19 N4 C B1232 9.680 86.954 72.207 1.00 51.30 N
ATOM 20 C5 C B1232 10.865 84.871 72.237 1.00 52.81 C
ATOM 21 C6 C B1232 10.817 83.568 72.542 1.00 52.65 C
ATOM 22 P A B1233 9.475 79.187 69.293 1.00 56.48 P
ATOM 23 OP1 A B1233 9.408 77.804 68.771 1.00 59.00 O
ATOM 24 OP2 A B1233 10.271 80.201 68.567 1.00 57.23 O
ATOM 25 O5' A B1233 7.994 79.742 69.468 1.00 55.60 O
TER
Atoms:
C4: (11.357,74.880,70.219)
N3: (11.585,76.183,69.812)
OP1: (16.864,72.375,72.192)
OP2: (16.938,70.951,70.054)
C2: (12.801,76.786,69.596)
C1': (15.249,76.555,69.622)
C3': (17.378,77.110,70.451)
O5': (17.565,73.358,70.021)
O4': (16.128,75.532,69.191)
C5': (17.878,74.627,70.627)
P: (17.513,72.029,70.901)
C4': (17.460,75.772,69.728)
C2': (15.913,77.152,70.865)
O2': (15.460,78.458,71.150)
N1: (13.910,75.973,69.828)
O4: (10.195,74.485,70.366)
O2: (12.885,77.948,69.228)
C6: (13.750,74.660,70.237)
C5: (12.546,74.102,70.432)
O3': (17.648,78.180,69.546)
N3: (11.585,76.183,69.812)
OP1: (16.864,72.375,72.192)
OP2: (16.938,70.951,70.054)
C2: (12.801,76.786,69.596)
C1': (15.249,76.555,69.622)
C3': (17.378,77.110,70.451)
O5': (17.565,73.358,70.021)
O4': (16.128,75.532,69.191)
C5': (17.878,74.627,70.627)
P: (17.513,72.029,70.901)
C4': (17.460,75.772,69.728)
C2': (15.913,77.152,70.865)
O2': (15.460,78.458,71.150)
N1: (13.910,75.973,69.828)
O4: (10.195,74.485,70.366)
O2: (12.885,77.948,69.228)
C6: (13.750,74.660,70.237)
C5: (12.546,74.102,70.432)
O3': (17.648,78.180,69.546)
C2: (8.546,83.803,73.295)
OP1: (14.756,80.445,70.049)
OP2: (14.313,82.962,70.310)
C4: (9.693,85.652,72.485)
O5': (12.922,81.294,71.516)
C3': (10.224,80.254,71.559)
C1': (9.630,81.576,73.417)
O4': (10.954,81.096,73.613)
C5': (12.671,80.079,72.240)
P: (14.358,81.595,70.901)
O2: (7.525,83.277,73.760)
C4': (11.228,80.023,72.673)
C2': (8.991,80.719,72.323)
O2': (8.275,79.665,72.931)
N1: (9.685,83.010,73.071)
N3: (8.585,85.119,72.995)
N4: (9.680,86.954,72.207)
C6: (10.817,83.568,72.542)
C5: (10.865,84.871,72.237)
O3': (10.012,79.073,70.799)
OP1: (14.756,80.445,70.049)
OP2: (14.313,82.962,70.310)
C4: (9.693,85.652,72.485)
O5': (12.922,81.294,71.516)
C3': (10.224,80.254,71.559)
C1': (9.630,81.576,73.417)
O4': (10.954,81.096,73.613)
C5': (12.671,80.079,72.240)
P: (14.358,81.595,70.901)
O2: (7.525,83.277,73.760)
C4': (11.228,80.023,72.673)
C2': (8.991,80.719,72.323)
O2': (8.275,79.665,72.931)
N1: (9.685,83.010,73.071)
N3: (8.585,85.119,72.995)
N4: (9.680,86.954,72.207)
C6: (10.817,83.568,72.542)
C5: (10.865,84.871,72.237)
O3': (10.012,79.073,70.799)
Image (generated by PyMOL):