Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0988:01232
Extra
PDB:
ATOM 1 O3' U A 987 19.083 71.511 71.162 1.00 79.15 O
ATOM 2 P U A 988 17.532 71.889 70.944 1.00 82.13 P
ATOM 3 OP1 U A 988 16.899 72.248 72.239 1.00 82.09 O
ATOM 4 OP2 U A 988 16.951 70.799 70.120 1.00 83.59 O
ATOM 5 O5' U A 988 17.579 73.205 70.045 1.00 83.37 O
ATOM 6 C5' U A 988 17.924 74.481 70.623 1.00 83.68 C
ATOM 7 C4' U A 988 17.517 75.614 69.704 1.00 82.82 C
ATOM 8 O4' U A 988 16.175 75.383 69.191 1.00 85.05 O
ATOM 9 C3' U A 988 17.467 76.974 70.391 1.00 82.28 C
ATOM 10 O3' U A 988 17.729 78.011 69.447 1.00 79.10 O
ATOM 11 C2' U A 988 16.008 77.049 70.824 1.00 83.57 C
ATOM 12 O2' U A 988 15.570 78.367 71.073 1.00 83.44 O
ATOM 13 C1' U A 988 15.319 76.432 69.606 1.00 85.95 C
ATOM 14 N1 U A 988 13.972 75.881 69.846 1.00 88.90 N
ATOM 15 C2 U A 988 12.878 76.720 69.638 1.00 89.89 C
ATOM 16 O2 U A 988 12.980 77.879 69.262 1.00 89.96 O
ATOM 17 N3 U A 988 11.654 76.149 69.887 1.00 91.52 N
ATOM 18 C4 U A 988 11.404 74.855 70.307 1.00 92.46 C
ATOM 19 O4 U A 988 10.236 74.493 70.489 1.00 92.96 O
ATOM 20 C5 U A 988 12.577 74.049 70.491 1.00 91.51 C
ATOM 21 C6 U A 988 13.789 74.574 70.262 1.00 90.03 C
ATOM 22 P U A 989 19.120 78.823 69.497 1.00 76.79 P
ATOM 23 OP1 U A 989 18.821 80.233 69.116 1.00 77.41 O
ATOM 24 OP2 U A 989 20.109 78.041 68.706 1.00 76.24 O
ATOM 25 O5' U A 989 19.580 78.797 71.025 1.00 73.54 O
TER
ATOM 1 O3' C B1231 15.256 81.531 72.197 1.00 60.49 O
ATOM 2 P C B1232 14.300 81.533 70.900 1.00 60.78 P
ATOM 3 OP1 C B1232 14.729 80.404 70.036 1.00 59.73 O
ATOM 4 OP2 C B1232 14.235 82.908 70.331 1.00 59.31 O
ATOM 5 O5' C B1232 12.859 81.213 71.491 1.00 60.25 O
ATOM 6 C5' C B1232 12.615 80.011 72.239 1.00 58.74 C
ATOM 7 C4' C B1232 11.181 79.980 72.706 1.00 58.73 C
ATOM 8 O4' C B1232 10.937 81.084 73.619 1.00 59.57 O
ATOM 9 C3' C B1232 10.156 80.195 71.610 1.00 59.54 C
ATOM 10 O3' C B1232 9.937 79.003 70.865 1.00 60.34 O
ATOM 11 C2' C B1232 8.939 80.681 72.392 1.00 59.06 C
ATOM 12 O2' C B1232 8.219 79.655 73.044 1.00 58.89 O
ATOM 13 C1' C B1232 9.604 81.554 73.455 1.00 58.18 C
ATOM 14 N1 C B1232 9.632 82.987 73.099 1.00 56.92 N
ATOM 15 C2 C B1232 8.477 83.755 73.320 1.00 56.80 C
ATOM 16 O2 C B1232 7.470 83.208 73.791 1.00 57.70 O
ATOM 17 N3 C B1232 8.485 85.070 73.011 1.00 55.88 N
ATOM 18 C4 C B1232 9.581 85.626 72.498 1.00 55.88 C
ATOM 19 N4 C B1232 9.537 86.930 72.215 1.00 55.33 N
ATOM 20 C5 C B1232 10.771 84.871 72.254 1.00 55.65 C
ATOM 21 C6 C B1232 10.752 83.567 72.567 1.00 55.69 C
ATOM 22 P A B1233 9.409 79.100 69.352 1.00 61.44 P
ATOM 23 OP1 A B1233 9.310 77.708 68.850 1.00 63.50 O
ATOM 24 OP2 A B1233 10.225 80.086 68.606 1.00 61.18 O
ATOM 25 O5' A B1233 7.935 79.677 69.516 1.00 59.84 O
TER
ATOM 2 P U A 988 17.532 71.889 70.944 1.00 82.13 P
ATOM 3 OP1 U A 988 16.899 72.248 72.239 1.00 82.09 O
ATOM 4 OP2 U A 988 16.951 70.799 70.120 1.00 83.59 O
ATOM 5 O5' U A 988 17.579 73.205 70.045 1.00 83.37 O
ATOM 6 C5' U A 988 17.924 74.481 70.623 1.00 83.68 C
ATOM 7 C4' U A 988 17.517 75.614 69.704 1.00 82.82 C
ATOM 8 O4' U A 988 16.175 75.383 69.191 1.00 85.05 O
ATOM 9 C3' U A 988 17.467 76.974 70.391 1.00 82.28 C
ATOM 10 O3' U A 988 17.729 78.011 69.447 1.00 79.10 O
ATOM 11 C2' U A 988 16.008 77.049 70.824 1.00 83.57 C
ATOM 12 O2' U A 988 15.570 78.367 71.073 1.00 83.44 O
ATOM 13 C1' U A 988 15.319 76.432 69.606 1.00 85.95 C
ATOM 14 N1 U A 988 13.972 75.881 69.846 1.00 88.90 N
ATOM 15 C2 U A 988 12.878 76.720 69.638 1.00 89.89 C
ATOM 16 O2 U A 988 12.980 77.879 69.262 1.00 89.96 O
ATOM 17 N3 U A 988 11.654 76.149 69.887 1.00 91.52 N
ATOM 18 C4 U A 988 11.404 74.855 70.307 1.00 92.46 C
ATOM 19 O4 U A 988 10.236 74.493 70.489 1.00 92.96 O
ATOM 20 C5 U A 988 12.577 74.049 70.491 1.00 91.51 C
ATOM 21 C6 U A 988 13.789 74.574 70.262 1.00 90.03 C
ATOM 22 P U A 989 19.120 78.823 69.497 1.00 76.79 P
ATOM 23 OP1 U A 989 18.821 80.233 69.116 1.00 77.41 O
ATOM 24 OP2 U A 989 20.109 78.041 68.706 1.00 76.24 O
ATOM 25 O5' U A 989 19.580 78.797 71.025 1.00 73.54 O
TER
ATOM 1 O3' C B1231 15.256 81.531 72.197 1.00 60.49 O
ATOM 2 P C B1232 14.300 81.533 70.900 1.00 60.78 P
ATOM 3 OP1 C B1232 14.729 80.404 70.036 1.00 59.73 O
ATOM 4 OP2 C B1232 14.235 82.908 70.331 1.00 59.31 O
ATOM 5 O5' C B1232 12.859 81.213 71.491 1.00 60.25 O
ATOM 6 C5' C B1232 12.615 80.011 72.239 1.00 58.74 C
ATOM 7 C4' C B1232 11.181 79.980 72.706 1.00 58.73 C
ATOM 8 O4' C B1232 10.937 81.084 73.619 1.00 59.57 O
ATOM 9 C3' C B1232 10.156 80.195 71.610 1.00 59.54 C
ATOM 10 O3' C B1232 9.937 79.003 70.865 1.00 60.34 O
ATOM 11 C2' C B1232 8.939 80.681 72.392 1.00 59.06 C
ATOM 12 O2' C B1232 8.219 79.655 73.044 1.00 58.89 O
ATOM 13 C1' C B1232 9.604 81.554 73.455 1.00 58.18 C
ATOM 14 N1 C B1232 9.632 82.987 73.099 1.00 56.92 N
ATOM 15 C2 C B1232 8.477 83.755 73.320 1.00 56.80 C
ATOM 16 O2 C B1232 7.470 83.208 73.791 1.00 57.70 O
ATOM 17 N3 C B1232 8.485 85.070 73.011 1.00 55.88 N
ATOM 18 C4 C B1232 9.581 85.626 72.498 1.00 55.88 C
ATOM 19 N4 C B1232 9.537 86.930 72.215 1.00 55.33 N
ATOM 20 C5 C B1232 10.771 84.871 72.254 1.00 55.65 C
ATOM 21 C6 C B1232 10.752 83.567 72.567 1.00 55.69 C
ATOM 22 P A B1233 9.409 79.100 69.352 1.00 61.44 P
ATOM 23 OP1 A B1233 9.310 77.708 68.850 1.00 63.50 O
ATOM 24 OP2 A B1233 10.225 80.086 68.606 1.00 61.18 O
ATOM 25 O5' A B1233 7.935 79.677 69.516 1.00 59.84 O
TER
Atoms:
C4: (11.404,74.855,70.307)
N3: (11.654,76.149,69.887)
OP1: (16.899,72.248,72.239)
OP2: (16.951,70.799,70.120)
C2: (12.878,76.720,69.638)
C1': (15.319,76.432,69.606)
C3': (17.467,76.974,70.391)
O5': (17.579,73.205,70.045)
O4': (16.175,75.383,69.191)
C5': (17.924,74.481,70.623)
P: (17.532,71.889,70.944)
C4': (17.517,75.614,69.704)
C2': (16.008,77.049,70.824)
O2': (15.570,78.367,71.073)
N1: (13.972,75.881,69.846)
O4: (10.236,74.493,70.489)
O2: (12.980,77.879,69.262)
C6: (13.789,74.574,70.262)
C5: (12.577,74.049,70.491)
O3': (17.729,78.011,69.447)
N3: (11.654,76.149,69.887)
OP1: (16.899,72.248,72.239)
OP2: (16.951,70.799,70.120)
C2: (12.878,76.720,69.638)
C1': (15.319,76.432,69.606)
C3': (17.467,76.974,70.391)
O5': (17.579,73.205,70.045)
O4': (16.175,75.383,69.191)
C5': (17.924,74.481,70.623)
P: (17.532,71.889,70.944)
C4': (17.517,75.614,69.704)
C2': (16.008,77.049,70.824)
O2': (15.570,78.367,71.073)
N1: (13.972,75.881,69.846)
O4: (10.236,74.493,70.489)
O2: (12.980,77.879,69.262)
C6: (13.789,74.574,70.262)
C5: (12.577,74.049,70.491)
O3': (17.729,78.011,69.447)
C2: (8.477,83.755,73.320)
OP1: (14.729,80.404,70.036)
OP2: (14.235,82.908,70.331)
C4: (9.581,85.626,72.498)
O5': (12.859,81.213,71.491)
C3': (10.156,80.195,71.610)
C1': (9.604,81.554,73.455)
O4': (10.937,81.084,73.619)
C5': (12.615,80.011,72.239)
P: (14.300,81.533,70.900)
O2: (7.470,83.208,73.791)
C4': (11.181,79.980,72.706)
C2': (8.939,80.681,72.392)
O2': (8.219,79.655,73.044)
N1: (9.632,82.987,73.099)
N3: (8.485,85.070,73.011)
N4: (9.537,86.930,72.215)
C6: (10.752,83.567,72.567)
C5: (10.771,84.871,72.254)
O3': (9.937,79.003,70.865)
OP1: (14.729,80.404,70.036)
OP2: (14.235,82.908,70.331)
C4: (9.581,85.626,72.498)
O5': (12.859,81.213,71.491)
C3': (10.156,80.195,71.610)
C1': (9.604,81.554,73.455)
O4': (10.937,81.084,73.619)
C5': (12.615,80.011,72.239)
P: (14.300,81.533,70.900)
O2: (7.470,83.208,73.791)
C4': (11.181,79.980,72.706)
C2': (8.939,80.681,72.392)
O2': (8.219,79.655,73.044)
N1: (9.632,82.987,73.099)
N3: (8.485,85.070,73.011)
N4: (9.537,86.930,72.215)
C6: (10.752,83.567,72.567)
C5: (10.771,84.871,72.254)
O3': (9.937,79.003,70.865)
Image (generated by PyMOL):