Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A1225:A1264
Extra
PDB:
ATOM 1 O3' A A1224 -112.197 128.954 54.849 1.00 47.10 O
ATOM 2 P C A1225 -111.771 127.532 54.219 1.00 83.38 P
ATOM 3 OP1 C A1225 -112.759 127.242 53.149 1.00 55.14 O
ATOM 4 OP2 C A1225 -111.570 126.549 55.312 1.00 52.01 O
ATOM 5 O5' C A1225 -110.359 127.804 53.527 1.00 77.74 O
ATOM 6 C5' C A1225 -109.345 128.544 54.211 1.00 78.08 C
ATOM 7 C4' C A1225 -107.965 128.145 53.743 1.00 78.18 C
ATOM 8 O4' C A1225 -107.046 128.782 54.666 1.00 78.76 O
ATOM 9 C3' C A1225 -107.641 126.654 53.819 1.00 77.65 C
ATOM 10 O3' C A1225 -107.829 125.982 52.585 1.00 76.08 O
ATOM 11 C2' C A1225 -106.177 126.627 54.233 1.00 77.91 C
ATOM 12 O2' C A1225 -105.268 126.759 53.160 1.00 77.25 O
ATOM 13 C1' C A1225 -106.118 127.835 55.164 1.00 77.93 C
ATOM 14 N1 C A1225 -106.555 127.446 56.517 1.00 37.05 N
ATOM 15 C2 C A1225 -105.594 127.047 57.446 1.00 36.67 C
ATOM 16 O2 C A1225 -104.385 127.061 57.112 1.00 37.06 O
ATOM 17 N3 C A1225 -106.006 126.651 58.678 1.00 36.26 N
ATOM 18 C4 C A1225 -107.313 126.640 58.979 1.00 35.95 C
ATOM 19 N4 C A1225 -107.683 126.223 60.190 1.00 35.57 N
ATOM 20 C5 C A1225 -108.301 127.053 58.051 1.00 36.28 C
ATOM 21 C6 C A1225 -107.886 127.450 56.851 1.00 36.53 C
ATOM 22 P A A1226 -107.963 124.380 52.566 1.00 72.65 P
ATOM 23 OP1 A A1226 -107.545 123.944 51.208 1.00 60.23 O
ATOM 24 OP2 A A1226 -109.307 123.995 53.090 1.00 58.13 O
ATOM 25 O5' A A1226 -106.874 123.867 53.611 1.00 77.03 O
TER
ATOM 1 O3' A B1263 -109.963 123.294 64.475 1.00 57.33 O
ATOM 2 P A B1264 -110.043 124.737 65.202 1.00 50.60 P
ATOM 3 OP1 A B1264 -110.978 124.590 66.359 1.00 32.82 O
ATOM 4 OP2 A B1264 -110.265 125.819 64.196 1.00 34.18 O
ATOM 5 O5' A B1264 -108.585 124.964 65.778 1.00 48.69 O
ATOM 6 C5' A B1264 -108.275 124.625 67.123 1.00 46.92 C
ATOM 7 C4' A B1264 -106.856 124.996 67.413 1.00 45.57 C
ATOM 8 O4' A B1264 -106.005 124.292 66.473 1.00 45.31 O
ATOM 9 C3' A B1264 -106.508 126.461 67.209 1.00 45.17 C
ATOM 10 O3' A B1264 -106.854 127.256 68.352 1.00 43.82 O
ATOM 11 C2' A B1264 -105.006 126.394 66.936 1.00 45.20 C
ATOM 12 O2' A B1264 -104.234 126.256 68.117 1.00 45.33 O
ATOM 13 C1' A B1264 -104.887 125.090 66.150 1.00 45.38 C
ATOM 14 N9 A B1264 -104.838 125.268 64.699 1.00 42.01 N
ATOM 15 C8 A B1264 -105.870 125.254 63.802 1.00 41.67 C
ATOM 16 N7 A B1264 -105.492 125.428 62.561 1.00 42.43 N
ATOM 17 C5 A B1264 -104.116 125.569 62.646 1.00 42.26 C
ATOM 18 C6 A B1264 -103.116 125.784 61.672 1.00 42.23 C
ATOM 19 N6 A B1264 -103.360 125.898 60.368 1.00 42.17 N
ATOM 20 N1 A B1264 -101.839 125.886 62.093 1.00 41.99 N
ATOM 21 C2 A B1264 -101.591 125.787 63.402 1.00 43.04 C
ATOM 22 N3 A B1264 -102.441 125.588 64.410 1.00 43.14 N
ATOM 23 C4 A B1264 -103.702 125.481 63.958 1.00 42.24 C
ATOM 24 P A B1265 -107.010 128.858 68.202 1.00 76.73 P
ATOM 25 OP1 A B1265 -107.391 129.380 69.545 1.00 78.20 O
ATOM 26 OP2 A B1265 -107.875 129.162 67.026 1.00 80.47 O
ATOM 27 O5' A B1265 -105.528 129.353 67.868 1.00 38.50 O
TER
ATOM 2 P C A1225 -111.771 127.532 54.219 1.00 83.38 P
ATOM 3 OP1 C A1225 -112.759 127.242 53.149 1.00 55.14 O
ATOM 4 OP2 C A1225 -111.570 126.549 55.312 1.00 52.01 O
ATOM 5 O5' C A1225 -110.359 127.804 53.527 1.00 77.74 O
ATOM 6 C5' C A1225 -109.345 128.544 54.211 1.00 78.08 C
ATOM 7 C4' C A1225 -107.965 128.145 53.743 1.00 78.18 C
ATOM 8 O4' C A1225 -107.046 128.782 54.666 1.00 78.76 O
ATOM 9 C3' C A1225 -107.641 126.654 53.819 1.00 77.65 C
ATOM 10 O3' C A1225 -107.829 125.982 52.585 1.00 76.08 O
ATOM 11 C2' C A1225 -106.177 126.627 54.233 1.00 77.91 C
ATOM 12 O2' C A1225 -105.268 126.759 53.160 1.00 77.25 O
ATOM 13 C1' C A1225 -106.118 127.835 55.164 1.00 77.93 C
ATOM 14 N1 C A1225 -106.555 127.446 56.517 1.00 37.05 N
ATOM 15 C2 C A1225 -105.594 127.047 57.446 1.00 36.67 C
ATOM 16 O2 C A1225 -104.385 127.061 57.112 1.00 37.06 O
ATOM 17 N3 C A1225 -106.006 126.651 58.678 1.00 36.26 N
ATOM 18 C4 C A1225 -107.313 126.640 58.979 1.00 35.95 C
ATOM 19 N4 C A1225 -107.683 126.223 60.190 1.00 35.57 N
ATOM 20 C5 C A1225 -108.301 127.053 58.051 1.00 36.28 C
ATOM 21 C6 C A1225 -107.886 127.450 56.851 1.00 36.53 C
ATOM 22 P A A1226 -107.963 124.380 52.566 1.00 72.65 P
ATOM 23 OP1 A A1226 -107.545 123.944 51.208 1.00 60.23 O
ATOM 24 OP2 A A1226 -109.307 123.995 53.090 1.00 58.13 O
ATOM 25 O5' A A1226 -106.874 123.867 53.611 1.00 77.03 O
TER
ATOM 1 O3' A B1263 -109.963 123.294 64.475 1.00 57.33 O
ATOM 2 P A B1264 -110.043 124.737 65.202 1.00 50.60 P
ATOM 3 OP1 A B1264 -110.978 124.590 66.359 1.00 32.82 O
ATOM 4 OP2 A B1264 -110.265 125.819 64.196 1.00 34.18 O
ATOM 5 O5' A B1264 -108.585 124.964 65.778 1.00 48.69 O
ATOM 6 C5' A B1264 -108.275 124.625 67.123 1.00 46.92 C
ATOM 7 C4' A B1264 -106.856 124.996 67.413 1.00 45.57 C
ATOM 8 O4' A B1264 -106.005 124.292 66.473 1.00 45.31 O
ATOM 9 C3' A B1264 -106.508 126.461 67.209 1.00 45.17 C
ATOM 10 O3' A B1264 -106.854 127.256 68.352 1.00 43.82 O
ATOM 11 C2' A B1264 -105.006 126.394 66.936 1.00 45.20 C
ATOM 12 O2' A B1264 -104.234 126.256 68.117 1.00 45.33 O
ATOM 13 C1' A B1264 -104.887 125.090 66.150 1.00 45.38 C
ATOM 14 N9 A B1264 -104.838 125.268 64.699 1.00 42.01 N
ATOM 15 C8 A B1264 -105.870 125.254 63.802 1.00 41.67 C
ATOM 16 N7 A B1264 -105.492 125.428 62.561 1.00 42.43 N
ATOM 17 C5 A B1264 -104.116 125.569 62.646 1.00 42.26 C
ATOM 18 C6 A B1264 -103.116 125.784 61.672 1.00 42.23 C
ATOM 19 N6 A B1264 -103.360 125.898 60.368 1.00 42.17 N
ATOM 20 N1 A B1264 -101.839 125.886 62.093 1.00 41.99 N
ATOM 21 C2 A B1264 -101.591 125.787 63.402 1.00 43.04 C
ATOM 22 N3 A B1264 -102.441 125.588 64.410 1.00 43.14 N
ATOM 23 C4 A B1264 -103.702 125.481 63.958 1.00 42.24 C
ATOM 24 P A B1265 -107.010 128.858 68.202 1.00 76.73 P
ATOM 25 OP1 A B1265 -107.391 129.380 69.545 1.00 78.20 O
ATOM 26 OP2 A B1265 -107.875 129.162 67.026 1.00 80.47 O
ATOM 27 O5' A B1265 -105.528 129.353 67.868 1.00 38.50 O
TER
Atoms:
C2: (-105.594,127.047,57.446)
OP1: (-112.759,127.242,53.149)
OP2: (-111.570,126.549,55.312)
C4: (-107.313,126.640,58.979)
O5': (-110.359,127.804,53.527)
C3': (-107.641,126.654,53.819)
C1': (-106.118,127.835,55.164)
O4': (-107.046,128.782,54.666)
C5': (-109.345,128.544,54.211)
P: (-111.771,127.532,54.219)
O2: (-104.385,127.061,57.112)
C4': (-107.965,128.145,53.743)
C2': (-106.177,126.627,54.233)
O2': (-105.268,126.759,53.160)
N1: (-106.555,127.446,56.517)
N3: (-106.006,126.651,58.678)
N4: (-107.683,126.223,60.190)
C6: (-107.886,127.450,56.851)
C5: (-108.301,127.053,58.051)
O3': (-107.829,125.982,52.585)
OP1: (-112.759,127.242,53.149)
OP2: (-111.570,126.549,55.312)
C4: (-107.313,126.640,58.979)
O5': (-110.359,127.804,53.527)
C3': (-107.641,126.654,53.819)
C1': (-106.118,127.835,55.164)
O4': (-107.046,128.782,54.666)
C5': (-109.345,128.544,54.211)
P: (-111.771,127.532,54.219)
O2: (-104.385,127.061,57.112)
C4': (-107.965,128.145,53.743)
C2': (-106.177,126.627,54.233)
O2': (-105.268,126.759,53.160)
N1: (-106.555,127.446,56.517)
N3: (-106.006,126.651,58.678)
N4: (-107.683,126.223,60.190)
C6: (-107.886,127.450,56.851)
C5: (-108.301,127.053,58.051)
O3': (-107.829,125.982,52.585)
OP1: (-110.978,124.590,66.359)
OP2: (-110.265,125.819,64.196)
C3': (-106.508,126.461,67.209)
C1': (-104.887,125.090,66.150)
C5': (-108.275,124.625,67.123)
O4': (-106.005,124.292,66.473)
C8: (-105.870,125.254,63.802)
O2': (-104.234,126.256,68.117)
C6: (-103.116,125.784,61.672)
C5: (-104.116,125.569,62.646)
C4: (-103.702,125.481,63.958)
P: (-110.043,124.737,65.202)
C4': (-106.856,124.996,67.413)
C2': (-105.006,126.394,66.936)
C2: (-101.591,125.787,63.402)
N1: (-101.839,125.886,62.093)
N3: (-102.441,125.588,64.410)
N6: (-103.360,125.898,60.368)
N7: (-105.492,125.428,62.561)
N9: (-104.838,125.268,64.699)
O5': (-108.585,124.964,65.778)
O3': (-106.854,127.256,68.352)
OP2: (-110.265,125.819,64.196)
C3': (-106.508,126.461,67.209)
C1': (-104.887,125.090,66.150)
C5': (-108.275,124.625,67.123)
O4': (-106.005,124.292,66.473)
C8: (-105.870,125.254,63.802)
O2': (-104.234,126.256,68.117)
C6: (-103.116,125.784,61.672)
C5: (-104.116,125.569,62.646)
C4: (-103.702,125.481,63.958)
P: (-110.043,124.737,65.202)
C4': (-106.856,124.996,67.413)
C2': (-105.006,126.394,66.936)
C2: (-101.591,125.787,63.402)
N1: (-101.839,125.886,62.093)
N3: (-102.441,125.588,64.410)
N6: (-103.360,125.898,60.368)
N7: (-105.492,125.428,62.561)
N9: (-104.838,125.268,64.699)
O5': (-108.585,124.964,65.778)
O3': (-106.854,127.256,68.352)
Image (generated by PyMOL):