Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01385:01396
Extra
PDB:
ATOM 1 O3' G A1384 43.979 174.688 68.348 1.00 52.73 O
ATOM 2 P C A1385 43.598 174.532 69.899 1.00 55.09 P
ATOM 3 OP1 C A1385 42.117 174.561 69.993 1.00 55.38 O
ATOM 4 OP2 C A1385 44.398 175.480 70.719 1.00 53.17 O
ATOM 5 O5' C A1385 44.061 173.044 70.198 1.00 53.65 O
ATOM 6 C5' C A1385 43.696 171.987 69.300 1.00 54.07 C
ATOM 7 C4' C A1385 44.206 170.672 69.819 1.00 55.58 C
ATOM 8 O4' C A1385 45.653 170.629 69.705 1.00 55.01 O
ATOM 9 C3' C A1385 43.887 170.415 71.282 1.00 56.68 C
ATOM 10 O3' C A1385 43.724 169.025 71.459 1.00 61.11 O
ATOM 11 C2' C A1385 45.151 170.889 71.987 1.00 54.29 C
ATOM 12 O2' C A1385 45.345 170.235 73.218 1.00 55.74 O
ATOM 13 C1' C A1385 46.226 170.474 70.986 1.00 52.49 C
ATOM 14 N1 C A1385 47.448 171.292 71.038 1.00 50.04 N
ATOM 15 C2 C A1385 48.671 170.660 71.280 1.00 48.66 C
ATOM 16 O2 C A1385 48.694 169.433 71.447 1.00 45.96 O
ATOM 17 N3 C A1385 49.800 171.404 71.322 1.00 48.89 N
ATOM 18 C4 C A1385 49.739 172.723 71.133 1.00 48.20 C
ATOM 19 N4 C A1385 50.878 173.411 71.184 1.00 47.91 N
ATOM 20 C5 C A1385 48.508 173.392 70.885 1.00 48.09 C
ATOM 21 C6 C A1385 47.398 172.646 70.848 1.00 48.67 C
ATOM 22 P A A1386 42.259 168.420 71.683 1.00 62.80 P
ATOM 23 OP1 A A1386 41.435 168.761 70.490 1.00 60.08 O
ATOM 24 OP2 A A1386 41.823 168.858 73.041 1.00 60.68 O
ATOM 25 O5' A A1386 42.544 166.854 71.692 1.00 61.30 O
TER
ATOM 1 O3' C B1395 55.865 177.591 72.780 1.00 39.85 O
ATOM 2 P A B1396 56.077 177.177 71.246 1.00 40.85 P
ATOM 3 OP1 A B1396 57.121 178.056 70.656 1.00 42.08 O
ATOM 4 OP2 A B1396 54.742 177.075 70.588 1.00 40.20 O
ATOM 5 O5' A B1396 56.700 175.722 71.367 1.00 40.24 O
ATOM 6 C5' A B1396 57.951 175.518 72.036 1.00 36.15 C
ATOM 7 C4' A B1396 58.290 174.050 72.064 1.00 35.28 C
ATOM 8 O4' A B1396 57.399 173.345 72.960 1.00 33.18 O
ATOM 9 C3' A B1396 58.132 173.306 70.754 1.00 33.61 C
ATOM 10 O3' A B1396 59.240 173.543 69.908 1.00 33.90 O
ATOM 11 C2' A B1396 58.069 171.866 71.229 1.00 34.47 C
ATOM 12 O2' A B1396 59.341 171.374 71.581 1.00 36.67 O
ATOM 13 C1' A B1396 57.250 172.010 72.510 1.00 35.65 C
ATOM 14 N9 A B1396 55.826 171.722 72.340 1.00 36.37 N
ATOM 15 C8 A B1396 54.805 172.597 72.095 1.00 36.28 C
ATOM 16 N7 A B1396 53.628 172.028 72.026 1.00 37.92 N
ATOM 17 C5 A B1396 53.894 170.686 72.234 1.00 36.51 C
ATOM 18 C6 A B1396 53.062 169.557 72.293 1.00 37.36 C
ATOM 19 N6 A B1396 51.742 169.604 72.152 1.00 37.49 N
ATOM 20 N1 A B1396 53.641 168.362 72.512 1.00 38.90 N
ATOM 21 C2 A B1396 54.971 168.316 72.668 1.00 40.84 C
ATOM 22 N3 A B1396 55.858 169.310 72.641 1.00 39.27 N
ATOM 23 C4 A B1396 55.245 170.482 72.417 1.00 36.12 C
ATOM 24 P G B1397 59.190 173.067 68.380 1.00 36.65 P
ATOM 25 OP1 G B1397 60.306 173.717 67.654 1.00 36.51 O
ATOM 26 OP2 G B1397 57.795 173.212 67.877 1.00 37.48 O
ATOM 27 O5' G B1397 59.512 171.513 68.452 1.00 37.44 O
TER
ATOM 2 P C A1385 43.598 174.532 69.899 1.00 55.09 P
ATOM 3 OP1 C A1385 42.117 174.561 69.993 1.00 55.38 O
ATOM 4 OP2 C A1385 44.398 175.480 70.719 1.00 53.17 O
ATOM 5 O5' C A1385 44.061 173.044 70.198 1.00 53.65 O
ATOM 6 C5' C A1385 43.696 171.987 69.300 1.00 54.07 C
ATOM 7 C4' C A1385 44.206 170.672 69.819 1.00 55.58 C
ATOM 8 O4' C A1385 45.653 170.629 69.705 1.00 55.01 O
ATOM 9 C3' C A1385 43.887 170.415 71.282 1.00 56.68 C
ATOM 10 O3' C A1385 43.724 169.025 71.459 1.00 61.11 O
ATOM 11 C2' C A1385 45.151 170.889 71.987 1.00 54.29 C
ATOM 12 O2' C A1385 45.345 170.235 73.218 1.00 55.74 O
ATOM 13 C1' C A1385 46.226 170.474 70.986 1.00 52.49 C
ATOM 14 N1 C A1385 47.448 171.292 71.038 1.00 50.04 N
ATOM 15 C2 C A1385 48.671 170.660 71.280 1.00 48.66 C
ATOM 16 O2 C A1385 48.694 169.433 71.447 1.00 45.96 O
ATOM 17 N3 C A1385 49.800 171.404 71.322 1.00 48.89 N
ATOM 18 C4 C A1385 49.739 172.723 71.133 1.00 48.20 C
ATOM 19 N4 C A1385 50.878 173.411 71.184 1.00 47.91 N
ATOM 20 C5 C A1385 48.508 173.392 70.885 1.00 48.09 C
ATOM 21 C6 C A1385 47.398 172.646 70.848 1.00 48.67 C
ATOM 22 P A A1386 42.259 168.420 71.683 1.00 62.80 P
ATOM 23 OP1 A A1386 41.435 168.761 70.490 1.00 60.08 O
ATOM 24 OP2 A A1386 41.823 168.858 73.041 1.00 60.68 O
ATOM 25 O5' A A1386 42.544 166.854 71.692 1.00 61.30 O
TER
ATOM 1 O3' C B1395 55.865 177.591 72.780 1.00 39.85 O
ATOM 2 P A B1396 56.077 177.177 71.246 1.00 40.85 P
ATOM 3 OP1 A B1396 57.121 178.056 70.656 1.00 42.08 O
ATOM 4 OP2 A B1396 54.742 177.075 70.588 1.00 40.20 O
ATOM 5 O5' A B1396 56.700 175.722 71.367 1.00 40.24 O
ATOM 6 C5' A B1396 57.951 175.518 72.036 1.00 36.15 C
ATOM 7 C4' A B1396 58.290 174.050 72.064 1.00 35.28 C
ATOM 8 O4' A B1396 57.399 173.345 72.960 1.00 33.18 O
ATOM 9 C3' A B1396 58.132 173.306 70.754 1.00 33.61 C
ATOM 10 O3' A B1396 59.240 173.543 69.908 1.00 33.90 O
ATOM 11 C2' A B1396 58.069 171.866 71.229 1.00 34.47 C
ATOM 12 O2' A B1396 59.341 171.374 71.581 1.00 36.67 O
ATOM 13 C1' A B1396 57.250 172.010 72.510 1.00 35.65 C
ATOM 14 N9 A B1396 55.826 171.722 72.340 1.00 36.37 N
ATOM 15 C8 A B1396 54.805 172.597 72.095 1.00 36.28 C
ATOM 16 N7 A B1396 53.628 172.028 72.026 1.00 37.92 N
ATOM 17 C5 A B1396 53.894 170.686 72.234 1.00 36.51 C
ATOM 18 C6 A B1396 53.062 169.557 72.293 1.00 37.36 C
ATOM 19 N6 A B1396 51.742 169.604 72.152 1.00 37.49 N
ATOM 20 N1 A B1396 53.641 168.362 72.512 1.00 38.90 N
ATOM 21 C2 A B1396 54.971 168.316 72.668 1.00 40.84 C
ATOM 22 N3 A B1396 55.858 169.310 72.641 1.00 39.27 N
ATOM 23 C4 A B1396 55.245 170.482 72.417 1.00 36.12 C
ATOM 24 P G B1397 59.190 173.067 68.380 1.00 36.65 P
ATOM 25 OP1 G B1397 60.306 173.717 67.654 1.00 36.51 O
ATOM 26 OP2 G B1397 57.795 173.212 67.877 1.00 37.48 O
ATOM 27 O5' G B1397 59.512 171.513 68.452 1.00 37.44 O
TER
Atoms:
C2: (48.671,170.660,71.280)
OP1: (42.117,174.561,69.993)
OP2: (44.398,175.480,70.719)
C4: (49.739,172.723,71.133)
O5': (44.061,173.044,70.198)
C3': (43.887,170.415,71.282)
C1': (46.226,170.474,70.986)
O4': (45.653,170.629,69.705)
C5': (43.696,171.987,69.300)
P: (43.598,174.532,69.899)
O2: (48.694,169.433,71.447)
C4': (44.206,170.672,69.819)
C2': (45.151,170.889,71.987)
O2': (45.345,170.235,73.218)
N1: (47.448,171.292,71.038)
N3: (49.800,171.404,71.322)
N4: (50.878,173.411,71.184)
C6: (47.398,172.646,70.848)
C5: (48.508,173.392,70.885)
O3': (43.724,169.025,71.459)
OP1: (42.117,174.561,69.993)
OP2: (44.398,175.480,70.719)
C4: (49.739,172.723,71.133)
O5': (44.061,173.044,70.198)
C3': (43.887,170.415,71.282)
C1': (46.226,170.474,70.986)
O4': (45.653,170.629,69.705)
C5': (43.696,171.987,69.300)
P: (43.598,174.532,69.899)
O2: (48.694,169.433,71.447)
C4': (44.206,170.672,69.819)
C2': (45.151,170.889,71.987)
O2': (45.345,170.235,73.218)
N1: (47.448,171.292,71.038)
N3: (49.800,171.404,71.322)
N4: (50.878,173.411,71.184)
C6: (47.398,172.646,70.848)
C5: (48.508,173.392,70.885)
O3': (43.724,169.025,71.459)
OP1: (57.121,178.056,70.656)
OP2: (54.742,177.075,70.588)
C3': (58.132,173.306,70.754)
C1': (57.250,172.010,72.510)
C5': (57.951,175.518,72.036)
O4': (57.399,173.345,72.960)
C8: (54.805,172.597,72.095)
O2': (59.341,171.374,71.581)
C6: (53.062,169.557,72.293)
C5: (53.894,170.686,72.234)
C4: (55.245,170.482,72.417)
P: (56.077,177.177,71.246)
C4': (58.290,174.050,72.064)
C2': (58.069,171.866,71.229)
C2: (54.971,168.316,72.668)
N1: (53.641,168.362,72.512)
N3: (55.858,169.310,72.641)
N6: (51.742,169.604,72.152)
N7: (53.628,172.028,72.026)
N9: (55.826,171.722,72.340)
O5': (56.700,175.722,71.367)
O3': (59.240,173.543,69.908)
OP2: (54.742,177.075,70.588)
C3': (58.132,173.306,70.754)
C1': (57.250,172.010,72.510)
C5': (57.951,175.518,72.036)
O4': (57.399,173.345,72.960)
C8: (54.805,172.597,72.095)
O2': (59.341,171.374,71.581)
C6: (53.062,169.557,72.293)
C5: (53.894,170.686,72.234)
C4: (55.245,170.482,72.417)
P: (56.077,177.177,71.246)
C4': (58.290,174.050,72.064)
C2': (58.069,171.866,71.229)
C2: (54.971,168.316,72.668)
N1: (53.641,168.362,72.512)
N3: (55.858,169.310,72.641)
N6: (51.742,169.604,72.152)
N7: (53.628,172.028,72.026)
N9: (55.826,171.722,72.340)
O5': (56.700,175.722,71.367)
O3': (59.240,173.543,69.908)
Image (generated by PyMOL):