Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01832:01814
Extra
PDB:
ATOM 1 O3' G A1831 118.541 138.543 60.522 1.00 39.96 O
ATOM 2 P U A1832 120.019 137.968 60.267 1.00 40.69 P
ATOM 3 OP1 U A1832 120.871 138.422 61.388 1.00 39.80 O
ATOM 4 OP2 U A1832 120.397 138.298 58.869 1.00 41.13 O
ATOM 5 O5' U A1832 119.869 136.385 60.340 1.00 38.38 O
ATOM 6 C5' U A1832 119.588 135.722 61.580 1.00 36.82 C
ATOM 7 C4' U A1832 120.159 134.328 61.554 1.00 36.26 C
ATOM 8 O4' U A1832 119.534 133.578 60.472 1.00 36.65 O
ATOM 9 C3' U A1832 121.659 134.250 61.295 1.00 37.25 C
ATOM 10 O3' U A1832 122.194 133.132 61.983 1.00 37.67 O
ATOM 11 C2' U A1832 121.723 134.004 59.794 1.00 37.53 C
ATOM 12 O2' U A1832 122.915 133.393 59.344 1.00 39.73 O
ATOM 13 C1' U A1832 120.529 133.077 59.606 1.00 35.31 C
ATOM 14 N1 U A1832 120.017 133.077 58.231 1.00 33.68 N
ATOM 15 C2 U A1832 120.212 131.930 57.478 1.00 34.40 C
ATOM 16 O2 U A1832 120.751 130.926 57.920 1.00 34.85 O
ATOM 17 N3 U A1832 119.755 132.001 56.189 1.00 32.40 N
ATOM 18 C4 U A1832 119.133 133.076 55.591 1.00 34.54 C
ATOM 19 O4 U A1832 118.819 133.006 54.402 1.00 37.35 O
ATOM 20 C5 U A1832 118.949 134.215 56.440 1.00 33.57 C
ATOM 21 C6 U A1832 119.383 134.175 57.700 1.00 33.23 C
ATOM 22 P A A1833 123.761 133.075 62.304 1.00 40.14 P
ATOM 23 OP1 A A1833 124.212 134.486 62.443 1.00 41.36 O
ATOM 24 OP2 A A1833 124.433 132.183 61.327 1.00 36.44 O
ATOM 25 O5' A A1833 123.818 132.389 63.736 1.00 38.67 O
TER
ATOM 1 O3' G B1813 122.776 124.074 56.110 1.00 44.46 O
ATOM 2 P C B1814 121.783 123.821 54.875 1.00 47.72 P
ATOM 3 OP1 C B1814 121.174 122.473 55.036 1.00 47.35 O
ATOM 4 OP2 C B1814 122.488 124.156 53.617 1.00 48.36 O
ATOM 5 O5' C B1814 120.663 124.925 55.103 1.00 47.19 O
ATOM 6 C5' C B1814 119.422 124.849 54.409 1.00 46.83 C
ATOM 7 C4' C B1814 118.756 126.201 54.372 1.00 46.85 C
ATOM 8 O4' C B1814 118.348 126.598 55.706 1.00 44.62 O
ATOM 9 C3' C B1814 119.589 127.351 53.818 1.00 45.73 C
ATOM 10 O3' C B1814 118.895 127.955 52.745 1.00 47.97 O
ATOM 11 C2' C B1814 119.728 128.305 55.002 1.00 44.55 C
ATOM 12 O2' C B1814 119.712 129.660 54.601 1.00 45.81 O
ATOM 13 C1' C B1814 118.481 127.991 55.823 1.00 42.27 C
ATOM 14 N1 C B1814 118.641 128.327 57.251 1.00 39.39 N
ATOM 15 C2 C B1814 117.799 129.292 57.825 1.00 38.10 C
ATOM 16 O2 C B1814 116.921 129.822 57.128 1.00 38.03 O
ATOM 17 N3 C B1814 117.970 129.627 59.124 1.00 38.07 N
ATOM 18 C4 C B1814 118.938 129.048 59.842 1.00 39.13 C
ATOM 19 N4 C B1814 119.093 129.432 61.105 1.00 38.71 N
ATOM 20 C5 C B1814 119.794 128.054 59.290 1.00 38.50 C
ATOM 21 C6 C B1814 119.610 127.723 58.006 1.00 39.43 C
ATOM 22 P A B1815 119.319 127.589 51.240 1.00 51.00 P
ATOM 23 OP1 A B1815 120.609 126.848 51.270 1.00 47.09 O
ATOM 24 OP2 A B1815 119.204 128.846 50.447 1.00 50.79 O
ATOM 25 O5' A B1815 118.219 126.542 50.753 1.00 51.61 O
TER
ATOM 2 P U A1832 120.019 137.968 60.267 1.00 40.69 P
ATOM 3 OP1 U A1832 120.871 138.422 61.388 1.00 39.80 O
ATOM 4 OP2 U A1832 120.397 138.298 58.869 1.00 41.13 O
ATOM 5 O5' U A1832 119.869 136.385 60.340 1.00 38.38 O
ATOM 6 C5' U A1832 119.588 135.722 61.580 1.00 36.82 C
ATOM 7 C4' U A1832 120.159 134.328 61.554 1.00 36.26 C
ATOM 8 O4' U A1832 119.534 133.578 60.472 1.00 36.65 O
ATOM 9 C3' U A1832 121.659 134.250 61.295 1.00 37.25 C
ATOM 10 O3' U A1832 122.194 133.132 61.983 1.00 37.67 O
ATOM 11 C2' U A1832 121.723 134.004 59.794 1.00 37.53 C
ATOM 12 O2' U A1832 122.915 133.393 59.344 1.00 39.73 O
ATOM 13 C1' U A1832 120.529 133.077 59.606 1.00 35.31 C
ATOM 14 N1 U A1832 120.017 133.077 58.231 1.00 33.68 N
ATOM 15 C2 U A1832 120.212 131.930 57.478 1.00 34.40 C
ATOM 16 O2 U A1832 120.751 130.926 57.920 1.00 34.85 O
ATOM 17 N3 U A1832 119.755 132.001 56.189 1.00 32.40 N
ATOM 18 C4 U A1832 119.133 133.076 55.591 1.00 34.54 C
ATOM 19 O4 U A1832 118.819 133.006 54.402 1.00 37.35 O
ATOM 20 C5 U A1832 118.949 134.215 56.440 1.00 33.57 C
ATOM 21 C6 U A1832 119.383 134.175 57.700 1.00 33.23 C
ATOM 22 P A A1833 123.761 133.075 62.304 1.00 40.14 P
ATOM 23 OP1 A A1833 124.212 134.486 62.443 1.00 41.36 O
ATOM 24 OP2 A A1833 124.433 132.183 61.327 1.00 36.44 O
ATOM 25 O5' A A1833 123.818 132.389 63.736 1.00 38.67 O
TER
ATOM 1 O3' G B1813 122.776 124.074 56.110 1.00 44.46 O
ATOM 2 P C B1814 121.783 123.821 54.875 1.00 47.72 P
ATOM 3 OP1 C B1814 121.174 122.473 55.036 1.00 47.35 O
ATOM 4 OP2 C B1814 122.488 124.156 53.617 1.00 48.36 O
ATOM 5 O5' C B1814 120.663 124.925 55.103 1.00 47.19 O
ATOM 6 C5' C B1814 119.422 124.849 54.409 1.00 46.83 C
ATOM 7 C4' C B1814 118.756 126.201 54.372 1.00 46.85 C
ATOM 8 O4' C B1814 118.348 126.598 55.706 1.00 44.62 O
ATOM 9 C3' C B1814 119.589 127.351 53.818 1.00 45.73 C
ATOM 10 O3' C B1814 118.895 127.955 52.745 1.00 47.97 O
ATOM 11 C2' C B1814 119.728 128.305 55.002 1.00 44.55 C
ATOM 12 O2' C B1814 119.712 129.660 54.601 1.00 45.81 O
ATOM 13 C1' C B1814 118.481 127.991 55.823 1.00 42.27 C
ATOM 14 N1 C B1814 118.641 128.327 57.251 1.00 39.39 N
ATOM 15 C2 C B1814 117.799 129.292 57.825 1.00 38.10 C
ATOM 16 O2 C B1814 116.921 129.822 57.128 1.00 38.03 O
ATOM 17 N3 C B1814 117.970 129.627 59.124 1.00 38.07 N
ATOM 18 C4 C B1814 118.938 129.048 59.842 1.00 39.13 C
ATOM 19 N4 C B1814 119.093 129.432 61.105 1.00 38.71 N
ATOM 20 C5 C B1814 119.794 128.054 59.290 1.00 38.50 C
ATOM 21 C6 C B1814 119.610 127.723 58.006 1.00 39.43 C
ATOM 22 P A B1815 119.319 127.589 51.240 1.00 51.00 P
ATOM 23 OP1 A B1815 120.609 126.848 51.270 1.00 47.09 O
ATOM 24 OP2 A B1815 119.204 128.846 50.447 1.00 50.79 O
ATOM 25 O5' A B1815 118.219 126.542 50.753 1.00 51.61 O
TER
Atoms:
C4: (119.133,133.076,55.591)
N3: (119.755,132.001,56.189)
OP1: (120.871,138.422,61.388)
OP2: (120.397,138.298,58.869)
C2: (120.212,131.930,57.478)
C1': (120.529,133.077,59.606)
C3': (121.659,134.250,61.295)
O5': (119.869,136.385,60.340)
O4': (119.534,133.578,60.472)
C5': (119.588,135.722,61.580)
P: (120.019,137.968,60.267)
C4': (120.159,134.328,61.554)
C2': (121.723,134.004,59.794)
O2': (122.915,133.393,59.344)
N1: (120.017,133.077,58.231)
O4: (118.819,133.006,54.402)
O2: (120.751,130.926,57.920)
C6: (119.383,134.175,57.700)
C5: (118.949,134.215,56.440)
O3': (122.194,133.132,61.983)
N3: (119.755,132.001,56.189)
OP1: (120.871,138.422,61.388)
OP2: (120.397,138.298,58.869)
C2: (120.212,131.930,57.478)
C1': (120.529,133.077,59.606)
C3': (121.659,134.250,61.295)
O5': (119.869,136.385,60.340)
O4': (119.534,133.578,60.472)
C5': (119.588,135.722,61.580)
P: (120.019,137.968,60.267)
C4': (120.159,134.328,61.554)
C2': (121.723,134.004,59.794)
O2': (122.915,133.393,59.344)
N1: (120.017,133.077,58.231)
O4: (118.819,133.006,54.402)
O2: (120.751,130.926,57.920)
C6: (119.383,134.175,57.700)
C5: (118.949,134.215,56.440)
O3': (122.194,133.132,61.983)
C2: (117.799,129.292,57.825)
OP1: (121.174,122.473,55.036)
OP2: (122.488,124.156,53.617)
C4: (118.938,129.048,59.842)
O5': (120.663,124.925,55.103)
C3': (119.589,127.351,53.818)
C1': (118.481,127.991,55.823)
O4': (118.348,126.598,55.706)
C5': (119.422,124.849,54.409)
P: (121.783,123.821,54.875)
O2: (116.921,129.822,57.128)
C4': (118.756,126.201,54.372)
C2': (119.728,128.305,55.002)
O2': (119.712,129.660,54.601)
N1: (118.641,128.327,57.251)
N3: (117.970,129.627,59.124)
N4: (119.093,129.432,61.105)
C6: (119.610,127.723,58.006)
C5: (119.794,128.054,59.290)
O3': (118.895,127.955,52.745)
OP1: (121.174,122.473,55.036)
OP2: (122.488,124.156,53.617)
C4: (118.938,129.048,59.842)
O5': (120.663,124.925,55.103)
C3': (119.589,127.351,53.818)
C1': (118.481,127.991,55.823)
O4': (118.348,126.598,55.706)
C5': (119.422,124.849,54.409)
P: (121.783,123.821,54.875)
O2: (116.921,129.822,57.128)
C4': (118.756,126.201,54.372)
C2': (119.728,128.305,55.002)
O2': (119.712,129.660,54.601)
N1: (118.641,128.327,57.251)
N3: (117.970,129.627,59.124)
N4: (119.093,129.432,61.105)
C6: (119.610,127.723,58.006)
C5: (119.794,128.054,59.290)
O3': (118.895,127.955,52.745)
Image (generated by PyMOL):