Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A312:A319
Extra
PDB:
ATOM 1 O3' A A 311 38.146 -12.026 62.970 1.00 89.31 O
ATOM 2 P C A 312 37.326 -11.127 64.038 1.00 93.11 P
ATOM 3 OP1 C A 312 35.887 -11.476 63.883 1.00 88.87 O
ATOM 4 OP2 C A 312 37.747 -9.713 63.844 1.00 84.84 O
ATOM 5 O5' C A 312 37.860 -11.670 65.434 1.00 77.39 O
ATOM 6 C5' C A 312 37.566 -12.996 65.845 1.00 73.70 C
ATOM 7 C4' C A 312 38.366 -13.402 67.060 1.00 83.73 C
ATOM 8 O4' C A 312 39.781 -13.217 66.814 1.00 82.83 O
ATOM 9 C3' C A 312 38.121 -12.604 68.334 1.00 89.21 C
ATOM 10 O3' C A 312 36.917 -12.965 69.002 1.00 93.24 O
ATOM 11 C2' C A 312 39.383 -12.896 69.138 1.00 81.55 C
ATOM 12 O2' C A 312 39.328 -14.192 69.711 1.00 76.46 O
ATOM 13 C1' C A 312 40.434 -12.911 68.033 1.00 83.85 C
ATOM 14 N1 C A 312 41.098 -11.614 67.900 1.00 87.05 N
ATOM 15 C2 C A 312 42.167 -11.390 68.752 1.00 91.06 C
ATOM 16 O2 C A 312 42.462 -12.295 69.548 1.00 89.43 O
ATOM 17 N3 C A 312 42.825 -10.213 68.675 1.00 89.76 N
ATOM 18 C4 C A 312 42.426 -9.302 67.790 1.00 87.47 C
ATOM 19 N4 C A 312 43.094 -8.155 67.741 1.00 95.90 N
ATOM 20 C5 C A 312 41.334 -9.510 66.909 1.00 86.35 C
ATOM 21 C6 C A 312 40.693 -10.677 66.998 1.00 87.15 C
ATOM 22 P U A 313 35.852 -11.834 69.423 1.00 98.56 P
ATOM 23 OP1 U A 313 34.611 -12.540 69.796 1.00 92.89 O
ATOM 24 OP2 U A 313 35.805 -10.837 68.322 1.00 97.94 O
ATOM 25 O5' U A 313 36.523 -11.179 70.714 1.00 98.91 O
TER
ATOM 1 O3' C B 318 47.880 -5.469 62.358 1.00 89.60 O
ATOM 2 P A B 319 48.367 -6.258 63.694 1.00 85.66 P
ATOM 3 OP1 A B 319 49.860 -6.338 63.624 1.00 67.84 O
ATOM 4 OP2 A B 319 47.605 -7.518 63.776 1.00 87.36 O
ATOM 5 O5' A B 319 47.935 -5.283 64.887 1.00102.59 O
ATOM 6 C5' A B 319 48.681 -4.098 65.179 1.00106.27 C
ATOM 7 C4' A B 319 49.012 -3.954 66.661 1.00103.89 C
ATOM 8 O4' A B 319 47.886 -4.379 67.478 1.00 84.14 O
ATOM 9 C3' A B 319 50.238 -4.732 67.166 1.00 92.78 C
ATOM 10 O3' A B 319 51.038 -3.871 67.977 1.00 99.00 O
ATOM 11 C2' A B 319 49.626 -5.835 68.039 1.00 83.00 C
ATOM 12 O2' A B 319 50.458 -6.273 69.096 1.00 75.23 O
ATOM 13 C1' A B 319 48.366 -5.149 68.555 1.00 80.31 C
ATOM 14 N9 A B 319 47.298 -6.051 68.983 1.00 83.91 N
ATOM 15 C8 A B 319 46.040 -6.174 68.443 1.00 88.20 C
ATOM 16 N7 A B 319 45.265 -7.036 69.060 1.00 84.68 N
ATOM 17 C5 A B 319 46.063 -7.506 70.085 1.00 82.10 C
ATOM 18 C6 A B 319 45.822 -8.445 71.097 1.00 86.01 C
ATOM 19 N6 A B 319 44.672 -9.097 71.242 1.00 90.81 N
ATOM 20 N1 A B 319 46.823 -8.693 71.971 1.00 90.71 N
ATOM 21 C2 A B 319 47.984 -8.021 71.826 1.00 95.52 C
ATOM 22 N3 A B 319 48.333 -7.112 70.913 1.00 96.48 N
ATOM 23 C4 A B 319 47.312 -6.900 70.060 1.00 87.83 C
ATOM 24 P C B 320 52.119 -2.888 67.296 1.00112.05 P
ATOM 25 OP1 C B 320 52.154 -1.647 68.105 1.00124.75 O
ATOM 26 OP2 C B 320 51.775 -2.789 65.852 1.00127.35 O
ATOM 27 O5' C B 320 53.484 -3.694 67.480 1.00 80.33 O
TER
ATOM 2 P C A 312 37.326 -11.127 64.038 1.00 93.11 P
ATOM 3 OP1 C A 312 35.887 -11.476 63.883 1.00 88.87 O
ATOM 4 OP2 C A 312 37.747 -9.713 63.844 1.00 84.84 O
ATOM 5 O5' C A 312 37.860 -11.670 65.434 1.00 77.39 O
ATOM 6 C5' C A 312 37.566 -12.996 65.845 1.00 73.70 C
ATOM 7 C4' C A 312 38.366 -13.402 67.060 1.00 83.73 C
ATOM 8 O4' C A 312 39.781 -13.217 66.814 1.00 82.83 O
ATOM 9 C3' C A 312 38.121 -12.604 68.334 1.00 89.21 C
ATOM 10 O3' C A 312 36.917 -12.965 69.002 1.00 93.24 O
ATOM 11 C2' C A 312 39.383 -12.896 69.138 1.00 81.55 C
ATOM 12 O2' C A 312 39.328 -14.192 69.711 1.00 76.46 O
ATOM 13 C1' C A 312 40.434 -12.911 68.033 1.00 83.85 C
ATOM 14 N1 C A 312 41.098 -11.614 67.900 1.00 87.05 N
ATOM 15 C2 C A 312 42.167 -11.390 68.752 1.00 91.06 C
ATOM 16 O2 C A 312 42.462 -12.295 69.548 1.00 89.43 O
ATOM 17 N3 C A 312 42.825 -10.213 68.675 1.00 89.76 N
ATOM 18 C4 C A 312 42.426 -9.302 67.790 1.00 87.47 C
ATOM 19 N4 C A 312 43.094 -8.155 67.741 1.00 95.90 N
ATOM 20 C5 C A 312 41.334 -9.510 66.909 1.00 86.35 C
ATOM 21 C6 C A 312 40.693 -10.677 66.998 1.00 87.15 C
ATOM 22 P U A 313 35.852 -11.834 69.423 1.00 98.56 P
ATOM 23 OP1 U A 313 34.611 -12.540 69.796 1.00 92.89 O
ATOM 24 OP2 U A 313 35.805 -10.837 68.322 1.00 97.94 O
ATOM 25 O5' U A 313 36.523 -11.179 70.714 1.00 98.91 O
TER
ATOM 1 O3' C B 318 47.880 -5.469 62.358 1.00 89.60 O
ATOM 2 P A B 319 48.367 -6.258 63.694 1.00 85.66 P
ATOM 3 OP1 A B 319 49.860 -6.338 63.624 1.00 67.84 O
ATOM 4 OP2 A B 319 47.605 -7.518 63.776 1.00 87.36 O
ATOM 5 O5' A B 319 47.935 -5.283 64.887 1.00102.59 O
ATOM 6 C5' A B 319 48.681 -4.098 65.179 1.00106.27 C
ATOM 7 C4' A B 319 49.012 -3.954 66.661 1.00103.89 C
ATOM 8 O4' A B 319 47.886 -4.379 67.478 1.00 84.14 O
ATOM 9 C3' A B 319 50.238 -4.732 67.166 1.00 92.78 C
ATOM 10 O3' A B 319 51.038 -3.871 67.977 1.00 99.00 O
ATOM 11 C2' A B 319 49.626 -5.835 68.039 1.00 83.00 C
ATOM 12 O2' A B 319 50.458 -6.273 69.096 1.00 75.23 O
ATOM 13 C1' A B 319 48.366 -5.149 68.555 1.00 80.31 C
ATOM 14 N9 A B 319 47.298 -6.051 68.983 1.00 83.91 N
ATOM 15 C8 A B 319 46.040 -6.174 68.443 1.00 88.20 C
ATOM 16 N7 A B 319 45.265 -7.036 69.060 1.00 84.68 N
ATOM 17 C5 A B 319 46.063 -7.506 70.085 1.00 82.10 C
ATOM 18 C6 A B 319 45.822 -8.445 71.097 1.00 86.01 C
ATOM 19 N6 A B 319 44.672 -9.097 71.242 1.00 90.81 N
ATOM 20 N1 A B 319 46.823 -8.693 71.971 1.00 90.71 N
ATOM 21 C2 A B 319 47.984 -8.021 71.826 1.00 95.52 C
ATOM 22 N3 A B 319 48.333 -7.112 70.913 1.00 96.48 N
ATOM 23 C4 A B 319 47.312 -6.900 70.060 1.00 87.83 C
ATOM 24 P C B 320 52.119 -2.888 67.296 1.00112.05 P
ATOM 25 OP1 C B 320 52.154 -1.647 68.105 1.00124.75 O
ATOM 26 OP2 C B 320 51.775 -2.789 65.852 1.00127.35 O
ATOM 27 O5' C B 320 53.484 -3.694 67.480 1.00 80.33 O
TER
Atoms:
C2: (42.167,-11.390,68.752)
OP1: (35.887,-11.476,63.883)
OP2: (37.747,-9.713,63.844)
C4: (42.426,-9.302,67.790)
O5': (37.860,-11.670,65.434)
C3': (38.121,-12.604,68.334)
C1': (40.434,-12.911,68.033)
O4': (39.781,-13.217,66.814)
C5': (37.566,-12.996,65.845)
P: (37.326,-11.127,64.038)
O2: (42.462,-12.295,69.548)
C4': (38.366,-13.402,67.060)
C2': (39.383,-12.896,69.138)
O2': (39.328,-14.192,69.711)
N1: (41.098,-11.614,67.900)
N3: (42.825,-10.213,68.675)
N4: (43.094,-8.155,67.741)
C6: (40.693,-10.677,66.998)
C5: (41.334,-9.510,66.909)
O3': (36.917,-12.965,69.002)
OP1: (35.887,-11.476,63.883)
OP2: (37.747,-9.713,63.844)
C4: (42.426,-9.302,67.790)
O5': (37.860,-11.670,65.434)
C3': (38.121,-12.604,68.334)
C1': (40.434,-12.911,68.033)
O4': (39.781,-13.217,66.814)
C5': (37.566,-12.996,65.845)
P: (37.326,-11.127,64.038)
O2: (42.462,-12.295,69.548)
C4': (38.366,-13.402,67.060)
C2': (39.383,-12.896,69.138)
O2': (39.328,-14.192,69.711)
N1: (41.098,-11.614,67.900)
N3: (42.825,-10.213,68.675)
N4: (43.094,-8.155,67.741)
C6: (40.693,-10.677,66.998)
C5: (41.334,-9.510,66.909)
O3': (36.917,-12.965,69.002)
OP1: (49.860,-6.338,63.624)
OP2: (47.605,-7.518,63.776)
C3': (50.238,-4.732,67.166)
C1': (48.366,-5.149,68.555)
C5': (48.681,-4.098,65.179)
O4': (47.886,-4.379,67.478)
C8: (46.040,-6.174,68.443)
O2': (50.458,-6.273,69.096)
C6: (45.822,-8.445,71.097)
C5: (46.063,-7.506,70.085)
C4: (47.312,-6.900,70.060)
P: (48.367,-6.258,63.694)
C4': (49.012,-3.954,66.661)
C2': (49.626,-5.835,68.039)
C2: (47.984,-8.021,71.826)
N1: (46.823,-8.693,71.971)
N3: (48.333,-7.112,70.913)
N6: (44.672,-9.097,71.242)
N7: (45.265,-7.036,69.060)
N9: (47.298,-6.051,68.983)
O5': (47.935,-5.283,64.887)
O3': (51.038,-3.871,67.977)
OP2: (47.605,-7.518,63.776)
C3': (50.238,-4.732,67.166)
C1': (48.366,-5.149,68.555)
C5': (48.681,-4.098,65.179)
O4': (47.886,-4.379,67.478)
C8: (46.040,-6.174,68.443)
O2': (50.458,-6.273,69.096)
C6: (45.822,-8.445,71.097)
C5: (46.063,-7.506,70.085)
C4: (47.312,-6.900,70.060)
P: (48.367,-6.258,63.694)
C4': (49.012,-3.954,66.661)
C2': (49.626,-5.835,68.039)
C2: (47.984,-8.021,71.826)
N1: (46.823,-8.693,71.971)
N3: (48.333,-7.112,70.913)
N6: (44.672,-9.097,71.242)
N7: (45.265,-7.036,69.060)
N9: (47.298,-6.051,68.983)
O5': (47.935,-5.283,64.887)
O3': (51.038,-3.871,67.977)
Image (generated by PyMOL):