Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01832:01814
Extra
PDB:
ATOM 1 O3' G A1831 118.828 138.708 60.756 1.00 50.73 O
ATOM 2 P U A1832 120.336 138.242 60.453 1.00 49.36 P
ATOM 3 OP1 U A1832 121.181 138.837 61.498 1.00 49.01 O
ATOM 4 OP2 U A1832 120.613 138.524 59.026 1.00 49.55 O
ATOM 5 O5' U A1832 120.338 136.661 60.620 1.00 46.93 O
ATOM 6 C5' U A1832 120.088 136.052 61.889 1.00 46.83 C
ATOM 7 C4' U A1832 120.597 134.636 61.880 1.00 47.02 C
ATOM 8 O4' U A1832 119.942 133.930 60.790 1.00 47.02 O
ATOM 9 C3' U A1832 122.096 134.483 61.630 1.00 47.87 C
ATOM 10 O3' U A1832 122.584 133.335 62.308 1.00 48.21 O
ATOM 11 C2' U A1832 122.155 134.236 60.131 1.00 49.32 C
ATOM 12 O2' U A1832 123.323 133.577 59.675 1.00 50.39 O
ATOM 13 C1' U A1832 120.919 133.367 59.944 1.00 48.37 C
ATOM 14 N1 U A1832 120.427 133.362 58.563 1.00 47.48 N
ATOM 15 C2 U A1832 120.587 132.195 57.841 1.00 48.77 C
ATOM 16 O2 U A1832 121.081 131.178 58.313 1.00 48.68 O
ATOM 17 N3 U A1832 120.153 132.256 56.544 1.00 48.26 N
ATOM 18 C4 U A1832 119.595 133.341 55.910 1.00 49.38 C
ATOM 19 O4 U A1832 119.318 133.262 54.709 1.00 52.20 O
ATOM 20 C5 U A1832 119.447 134.502 56.731 1.00 47.93 C
ATOM 21 C6 U A1832 119.853 134.471 57.999 1.00 47.16 C
ATOM 22 P A A1833 124.158 133.180 62.582 1.00 51.27 P
ATOM 23 OP1 A A1833 124.736 134.550 62.620 1.00 51.45 O
ATOM 24 OP2 A A1833 124.725 132.170 61.662 1.00 49.10 O
ATOM 25 O5' A A1833 124.237 132.574 64.046 1.00 48.52 O
TER
ATOM 1 O3' G B1813 123.177 124.232 56.438 1.00 55.85 O
ATOM 2 P C B1814 122.177 124.036 55.200 1.00 59.80 P
ATOM 3 OP1 C B1814 121.588 122.671 55.306 1.00 58.47 O
ATOM 4 OP2 C B1814 122.880 124.434 53.949 1.00 58.96 O
ATOM 5 O5' C B1814 121.030 125.105 55.484 1.00 58.55 O
ATOM 6 C5' C B1814 119.734 124.937 54.899 1.00 58.66 C
ATOM 7 C4' C B1814 119.064 126.270 54.676 1.00 58.79 C
ATOM 8 O4' C B1814 118.529 126.790 55.925 1.00 56.96 O
ATOM 9 C3' C B1814 119.899 127.380 54.054 1.00 59.03 C
ATOM 10 O3' C B1814 119.129 128.054 53.073 1.00 61.57 O
ATOM 11 C2' C B1814 120.164 128.306 55.239 1.00 58.26 C
ATOM 12 O2' C B1814 120.297 129.659 54.865 1.00 60.31 O
ATOM 13 C1' C B1814 118.892 128.142 56.069 1.00 55.33 C
ATOM 14 N1 C B1814 119.100 128.422 57.504 1.00 53.19 N
ATOM 15 C2 C B1814 118.293 129.387 58.144 1.00 52.47 C
ATOM 16 O2 C B1814 117.400 129.964 57.500 1.00 51.97 O
ATOM 17 N3 C B1814 118.513 129.668 59.448 1.00 52.05 N
ATOM 18 C4 C B1814 119.491 129.040 60.112 1.00 54.03 C
ATOM 19 N4 C B1814 119.700 129.378 61.383 1.00 53.59 N
ATOM 20 C5 C B1814 120.307 128.044 59.496 1.00 53.23 C
ATOM 21 C6 C B1814 120.076 127.767 58.207 1.00 53.40 C
ATOM 22 P A B1815 119.472 127.848 51.518 1.00 63.64 P
ATOM 23 OP1 A B1815 120.876 127.382 51.384 1.00 59.97 O
ATOM 24 OP2 A B1815 119.041 129.097 50.834 1.00 63.29 O
ATOM 25 O5' A B1815 118.510 126.662 51.053 1.00 65.04 O
TER
ATOM 2 P U A1832 120.336 138.242 60.453 1.00 49.36 P
ATOM 3 OP1 U A1832 121.181 138.837 61.498 1.00 49.01 O
ATOM 4 OP2 U A1832 120.613 138.524 59.026 1.00 49.55 O
ATOM 5 O5' U A1832 120.338 136.661 60.620 1.00 46.93 O
ATOM 6 C5' U A1832 120.088 136.052 61.889 1.00 46.83 C
ATOM 7 C4' U A1832 120.597 134.636 61.880 1.00 47.02 C
ATOM 8 O4' U A1832 119.942 133.930 60.790 1.00 47.02 O
ATOM 9 C3' U A1832 122.096 134.483 61.630 1.00 47.87 C
ATOM 10 O3' U A1832 122.584 133.335 62.308 1.00 48.21 O
ATOM 11 C2' U A1832 122.155 134.236 60.131 1.00 49.32 C
ATOM 12 O2' U A1832 123.323 133.577 59.675 1.00 50.39 O
ATOM 13 C1' U A1832 120.919 133.367 59.944 1.00 48.37 C
ATOM 14 N1 U A1832 120.427 133.362 58.563 1.00 47.48 N
ATOM 15 C2 U A1832 120.587 132.195 57.841 1.00 48.77 C
ATOM 16 O2 U A1832 121.081 131.178 58.313 1.00 48.68 O
ATOM 17 N3 U A1832 120.153 132.256 56.544 1.00 48.26 N
ATOM 18 C4 U A1832 119.595 133.341 55.910 1.00 49.38 C
ATOM 19 O4 U A1832 119.318 133.262 54.709 1.00 52.20 O
ATOM 20 C5 U A1832 119.447 134.502 56.731 1.00 47.93 C
ATOM 21 C6 U A1832 119.853 134.471 57.999 1.00 47.16 C
ATOM 22 P A A1833 124.158 133.180 62.582 1.00 51.27 P
ATOM 23 OP1 A A1833 124.736 134.550 62.620 1.00 51.45 O
ATOM 24 OP2 A A1833 124.725 132.170 61.662 1.00 49.10 O
ATOM 25 O5' A A1833 124.237 132.574 64.046 1.00 48.52 O
TER
ATOM 1 O3' G B1813 123.177 124.232 56.438 1.00 55.85 O
ATOM 2 P C B1814 122.177 124.036 55.200 1.00 59.80 P
ATOM 3 OP1 C B1814 121.588 122.671 55.306 1.00 58.47 O
ATOM 4 OP2 C B1814 122.880 124.434 53.949 1.00 58.96 O
ATOM 5 O5' C B1814 121.030 125.105 55.484 1.00 58.55 O
ATOM 6 C5' C B1814 119.734 124.937 54.899 1.00 58.66 C
ATOM 7 C4' C B1814 119.064 126.270 54.676 1.00 58.79 C
ATOM 8 O4' C B1814 118.529 126.790 55.925 1.00 56.96 O
ATOM 9 C3' C B1814 119.899 127.380 54.054 1.00 59.03 C
ATOM 10 O3' C B1814 119.129 128.054 53.073 1.00 61.57 O
ATOM 11 C2' C B1814 120.164 128.306 55.239 1.00 58.26 C
ATOM 12 O2' C B1814 120.297 129.659 54.865 1.00 60.31 O
ATOM 13 C1' C B1814 118.892 128.142 56.069 1.00 55.33 C
ATOM 14 N1 C B1814 119.100 128.422 57.504 1.00 53.19 N
ATOM 15 C2 C B1814 118.293 129.387 58.144 1.00 52.47 C
ATOM 16 O2 C B1814 117.400 129.964 57.500 1.00 51.97 O
ATOM 17 N3 C B1814 118.513 129.668 59.448 1.00 52.05 N
ATOM 18 C4 C B1814 119.491 129.040 60.112 1.00 54.03 C
ATOM 19 N4 C B1814 119.700 129.378 61.383 1.00 53.59 N
ATOM 20 C5 C B1814 120.307 128.044 59.496 1.00 53.23 C
ATOM 21 C6 C B1814 120.076 127.767 58.207 1.00 53.40 C
ATOM 22 P A B1815 119.472 127.848 51.518 1.00 63.64 P
ATOM 23 OP1 A B1815 120.876 127.382 51.384 1.00 59.97 O
ATOM 24 OP2 A B1815 119.041 129.097 50.834 1.00 63.29 O
ATOM 25 O5' A B1815 118.510 126.662 51.053 1.00 65.04 O
TER
Atoms:
C4: (119.595,133.341,55.910)
N3: (120.153,132.256,56.544)
OP1: (121.181,138.837,61.498)
OP2: (120.613,138.524,59.026)
C2: (120.587,132.195,57.841)
C1': (120.919,133.367,59.944)
C3': (122.096,134.483,61.630)
O5': (120.338,136.661,60.620)
O4': (119.942,133.930,60.790)
C5': (120.088,136.052,61.889)
P: (120.336,138.242,60.453)
C4': (120.597,134.636,61.880)
C2': (122.155,134.236,60.131)
O2': (123.323,133.577,59.675)
N1: (120.427,133.362,58.563)
O4: (119.318,133.262,54.709)
O2: (121.081,131.178,58.313)
C6: (119.853,134.471,57.999)
C5: (119.447,134.502,56.731)
O3': (122.584,133.335,62.308)
N3: (120.153,132.256,56.544)
OP1: (121.181,138.837,61.498)
OP2: (120.613,138.524,59.026)
C2: (120.587,132.195,57.841)
C1': (120.919,133.367,59.944)
C3': (122.096,134.483,61.630)
O5': (120.338,136.661,60.620)
O4': (119.942,133.930,60.790)
C5': (120.088,136.052,61.889)
P: (120.336,138.242,60.453)
C4': (120.597,134.636,61.880)
C2': (122.155,134.236,60.131)
O2': (123.323,133.577,59.675)
N1: (120.427,133.362,58.563)
O4: (119.318,133.262,54.709)
O2: (121.081,131.178,58.313)
C6: (119.853,134.471,57.999)
C5: (119.447,134.502,56.731)
O3': (122.584,133.335,62.308)
C2: (118.293,129.387,58.144)
OP1: (121.588,122.671,55.306)
OP2: (122.880,124.434,53.949)
C4: (119.491,129.040,60.112)
O5': (121.030,125.105,55.484)
C3': (119.899,127.380,54.054)
C1': (118.892,128.142,56.069)
O4': (118.529,126.790,55.925)
C5': (119.734,124.937,54.899)
P: (122.177,124.036,55.200)
O2: (117.400,129.964,57.500)
C4': (119.064,126.270,54.676)
C2': (120.164,128.306,55.239)
O2': (120.297,129.659,54.865)
N1: (119.100,128.422,57.504)
N3: (118.513,129.668,59.448)
N4: (119.700,129.378,61.383)
C6: (120.076,127.767,58.207)
C5: (120.307,128.044,59.496)
O3': (119.129,128.054,53.073)
OP1: (121.588,122.671,55.306)
OP2: (122.880,124.434,53.949)
C4: (119.491,129.040,60.112)
O5': (121.030,125.105,55.484)
C3': (119.899,127.380,54.054)
C1': (118.892,128.142,56.069)
O4': (118.529,126.790,55.925)
C5': (119.734,124.937,54.899)
P: (122.177,124.036,55.200)
O2: (117.400,129.964,57.500)
C4': (119.064,126.270,54.676)
C2': (120.164,128.306,55.239)
O2': (120.297,129.659,54.865)
N1: (119.100,128.422,57.504)
N3: (118.513,129.668,59.448)
N4: (119.700,129.378,61.383)
C6: (120.076,127.767,58.207)
C5: (120.307,128.044,59.496)
O3': (119.129,128.054,53.073)
Image (generated by PyMOL):