Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OGE:A458:A442
Extra
PDB:
ATOM 1 O3' A A 457 60.168 13.184 111.773 1.00141.60 O
ATOM 2 P C A 458 61.401 13.417 110.768 1.00153.35 P
ATOM 3 OP1 C A 458 62.649 13.208 111.547 1.00134.06 O
ATOM 4 OP2 C A 458 61.179 14.732 110.109 1.00127.03 O
ATOM 5 O5' C A 458 61.221 12.239 109.709 1.00145.29 O
ATOM 6 C5' C A 458 61.032 10.898 110.139 1.00140.76 C
ATOM 7 C4' C A 458 60.786 9.959 108.978 1.00144.15 C
ATOM 8 O4' C A 458 59.499 10.232 108.366 1.00146.68 O
ATOM 9 C3' C A 458 61.759 10.048 107.816 1.00135.75 C
ATOM 10 O3' C A 458 62.990 9.404 108.077 1.00130.87 O
ATOM 11 C2' C A 458 60.968 9.409 106.680 1.00134.95 C
ATOM 12 O2' C A 458 61.017 7.992 106.778 1.00131.16 O
ATOM 13 C1' C A 458 59.541 9.867 106.998 1.00141.56 C
ATOM 14 N1 C A 458 59.120 11.024 106.173 1.00159.25 N
ATOM 15 C2 C A 458 58.754 10.790 104.848 1.00162.03 C
ATOM 16 O2 C A 458 58.817 9.631 104.417 1.00162.04 O
ATOM 17 N3 C A 458 58.356 11.823 104.069 1.00161.06 N
ATOM 18 C4 C A 458 58.306 13.056 104.570 1.00160.31 C
ATOM 19 N4 C A 458 57.908 14.049 103.769 1.00157.73 N
ATOM 20 C5 C A 458 58.665 13.322 105.920 1.00164.72 C
ATOM 21 C6 C A 458 59.059 12.290 106.678 1.00163.51 C
ATOM 22 P U A 459 64.324 9.894 107.332 1.00150.12 P
ATOM 23 OP1 U A 459 65.395 8.920 107.662 1.00128.75 O
ATOM 24 OP2 U A 459 64.523 11.325 107.688 1.00132.40 O
ATOM 25 O5' U A 459 63.932 9.765 105.792 1.00129.42 O
TER
ATOM 1 O3' A B 441 55.104 20.077 100.853 1.00113.29 O
ATOM 2 P A B 442 53.840 20.226 101.833 1.00134.91 P
ATOM 3 OP1 A B 442 53.572 21.682 101.983 1.00126.45 O
ATOM 4 OP2 A B 442 54.135 19.421 103.048 1.00124.50 O
ATOM 5 O5' A B 442 52.663 19.541 100.994 1.00134.46 O
ATOM 6 C5' A B 442 52.123 18.277 101.375 1.00127.15 C
ATOM 7 C4' A B 442 51.965 17.352 100.187 1.00125.08 C
ATOM 8 O4' A B 442 53.267 16.947 99.705 1.00119.13 O
ATOM 9 C3' A B 442 51.226 16.044 100.455 1.00125.14 C
ATOM 10 O3' A B 442 49.818 16.194 100.348 1.00128.77 O
ATOM 11 C2' A B 442 51.802 15.088 99.416 1.00125.70 C
ATOM 12 O2' A B 442 51.091 15.204 98.193 1.00130.77 O
ATOM 13 C1' A B 442 53.216 15.635 99.204 1.00120.97 C
ATOM 14 N9 A B 442 54.259 14.833 99.871 1.00117.88 N
ATOM 15 C8 A B 442 55.086 15.250 100.881 1.00123.13 C
ATOM 16 N7 A B 442 55.964 14.355 101.259 1.00126.78 N
ATOM 17 C5 A B 442 55.717 13.275 100.430 1.00123.89 C
ATOM 18 C6 A B 442 56.313 12.003 100.332 1.00125.73 C
ATOM 19 N6 A B 442 57.316 11.591 101.105 1.00126.85 N
ATOM 20 N1 A B 442 55.835 11.151 99.401 1.00128.28 N
ATOM 21 C2 A B 442 54.824 11.575 98.627 1.00132.04 C
ATOM 22 N3 A B 442 54.180 12.745 98.624 1.00126.56 N
ATOM 23 C4 A B 442 54.679 13.563 99.561 1.00121.23 C
ATOM 24 P C B 443 48.833 15.408 101.340 1.00158.10 P
ATOM 25 OP1 C B 443 47.444 15.733 100.925 1.00138.43 O
ATOM 26 OP2 C B 443 49.256 15.733 102.720 1.00149.38 O
ATOM 27 O5' C B 443 49.153 13.883 101.022 1.00145.79 O
TER
ATOM 2 P C A 458 61.401 13.417 110.768 1.00153.35 P
ATOM 3 OP1 C A 458 62.649 13.208 111.547 1.00134.06 O
ATOM 4 OP2 C A 458 61.179 14.732 110.109 1.00127.03 O
ATOM 5 O5' C A 458 61.221 12.239 109.709 1.00145.29 O
ATOM 6 C5' C A 458 61.032 10.898 110.139 1.00140.76 C
ATOM 7 C4' C A 458 60.786 9.959 108.978 1.00144.15 C
ATOM 8 O4' C A 458 59.499 10.232 108.366 1.00146.68 O
ATOM 9 C3' C A 458 61.759 10.048 107.816 1.00135.75 C
ATOM 10 O3' C A 458 62.990 9.404 108.077 1.00130.87 O
ATOM 11 C2' C A 458 60.968 9.409 106.680 1.00134.95 C
ATOM 12 O2' C A 458 61.017 7.992 106.778 1.00131.16 O
ATOM 13 C1' C A 458 59.541 9.867 106.998 1.00141.56 C
ATOM 14 N1 C A 458 59.120 11.024 106.173 1.00159.25 N
ATOM 15 C2 C A 458 58.754 10.790 104.848 1.00162.03 C
ATOM 16 O2 C A 458 58.817 9.631 104.417 1.00162.04 O
ATOM 17 N3 C A 458 58.356 11.823 104.069 1.00161.06 N
ATOM 18 C4 C A 458 58.306 13.056 104.570 1.00160.31 C
ATOM 19 N4 C A 458 57.908 14.049 103.769 1.00157.73 N
ATOM 20 C5 C A 458 58.665 13.322 105.920 1.00164.72 C
ATOM 21 C6 C A 458 59.059 12.290 106.678 1.00163.51 C
ATOM 22 P U A 459 64.324 9.894 107.332 1.00150.12 P
ATOM 23 OP1 U A 459 65.395 8.920 107.662 1.00128.75 O
ATOM 24 OP2 U A 459 64.523 11.325 107.688 1.00132.40 O
ATOM 25 O5' U A 459 63.932 9.765 105.792 1.00129.42 O
TER
ATOM 1 O3' A B 441 55.104 20.077 100.853 1.00113.29 O
ATOM 2 P A B 442 53.840 20.226 101.833 1.00134.91 P
ATOM 3 OP1 A B 442 53.572 21.682 101.983 1.00126.45 O
ATOM 4 OP2 A B 442 54.135 19.421 103.048 1.00124.50 O
ATOM 5 O5' A B 442 52.663 19.541 100.994 1.00134.46 O
ATOM 6 C5' A B 442 52.123 18.277 101.375 1.00127.15 C
ATOM 7 C4' A B 442 51.965 17.352 100.187 1.00125.08 C
ATOM 8 O4' A B 442 53.267 16.947 99.705 1.00119.13 O
ATOM 9 C3' A B 442 51.226 16.044 100.455 1.00125.14 C
ATOM 10 O3' A B 442 49.818 16.194 100.348 1.00128.77 O
ATOM 11 C2' A B 442 51.802 15.088 99.416 1.00125.70 C
ATOM 12 O2' A B 442 51.091 15.204 98.193 1.00130.77 O
ATOM 13 C1' A B 442 53.216 15.635 99.204 1.00120.97 C
ATOM 14 N9 A B 442 54.259 14.833 99.871 1.00117.88 N
ATOM 15 C8 A B 442 55.086 15.250 100.881 1.00123.13 C
ATOM 16 N7 A B 442 55.964 14.355 101.259 1.00126.78 N
ATOM 17 C5 A B 442 55.717 13.275 100.430 1.00123.89 C
ATOM 18 C6 A B 442 56.313 12.003 100.332 1.00125.73 C
ATOM 19 N6 A B 442 57.316 11.591 101.105 1.00126.85 N
ATOM 20 N1 A B 442 55.835 11.151 99.401 1.00128.28 N
ATOM 21 C2 A B 442 54.824 11.575 98.627 1.00132.04 C
ATOM 22 N3 A B 442 54.180 12.745 98.624 1.00126.56 N
ATOM 23 C4 A B 442 54.679 13.563 99.561 1.00121.23 C
ATOM 24 P C B 443 48.833 15.408 101.340 1.00158.10 P
ATOM 25 OP1 C B 443 47.444 15.733 100.925 1.00138.43 O
ATOM 26 OP2 C B 443 49.256 15.733 102.720 1.00149.38 O
ATOM 27 O5' C B 443 49.153 13.883 101.022 1.00145.79 O
TER
Atoms:
C2: (58.754,10.790,104.848)
OP1: (62.649,13.208,111.547)
OP2: (61.179,14.732,110.109)
C4: (58.306,13.056,104.570)
O5': (61.221,12.239,109.709)
C3': (61.759,10.048,107.816)
C1': (59.541,9.867,106.998)
O4': (59.499,10.232,108.366)
C5': (61.032,10.898,110.139)
P: (61.401,13.417,110.768)
O2: (58.817,9.631,104.417)
C4': (60.786,9.959,108.978)
C2': (60.968,9.409,106.680)
O2': (61.017,7.992,106.778)
N1: (59.120,11.024,106.173)
N3: (58.356,11.823,104.069)
N4: (57.908,14.049,103.769)
C6: (59.059,12.290,106.678)
C5: (58.665,13.322,105.920)
O3': (62.990,9.404,108.077)
OP1: (62.649,13.208,111.547)
OP2: (61.179,14.732,110.109)
C4: (58.306,13.056,104.570)
O5': (61.221,12.239,109.709)
C3': (61.759,10.048,107.816)
C1': (59.541,9.867,106.998)
O4': (59.499,10.232,108.366)
C5': (61.032,10.898,110.139)
P: (61.401,13.417,110.768)
O2: (58.817,9.631,104.417)
C4': (60.786,9.959,108.978)
C2': (60.968,9.409,106.680)
O2': (61.017,7.992,106.778)
N1: (59.120,11.024,106.173)
N3: (58.356,11.823,104.069)
N4: (57.908,14.049,103.769)
C6: (59.059,12.290,106.678)
C5: (58.665,13.322,105.920)
O3': (62.990,9.404,108.077)
OP1: (53.572,21.682,101.983)
OP2: (54.135,19.421,103.048)
C3': (51.226,16.044,100.455)
C1': (53.216,15.635,99.204)
C5': (52.123,18.277,101.375)
O4': (53.267,16.947,99.705)
C8: (55.086,15.250,100.881)
O2': (51.091,15.204,98.193)
C6: (56.313,12.003,100.332)
C5: (55.717,13.275,100.430)
C4: (54.679,13.563,99.561)
P: (53.840,20.226,101.833)
C4': (51.965,17.352,100.187)
C2': (51.802,15.088,99.416)
C2: (54.824,11.575,98.627)
N1: (55.835,11.151,99.401)
N3: (54.180,12.745,98.624)
N6: (57.316,11.591,101.105)
N7: (55.964,14.355,101.259)
N9: (54.259,14.833,99.871)
O5': (52.663,19.541,100.994)
O3': (49.818,16.194,100.348)
OP2: (54.135,19.421,103.048)
C3': (51.226,16.044,100.455)
C1': (53.216,15.635,99.204)
C5': (52.123,18.277,101.375)
O4': (53.267,16.947,99.705)
C8: (55.086,15.250,100.881)
O2': (51.091,15.204,98.193)
C6: (56.313,12.003,100.332)
C5: (55.717,13.275,100.430)
C4: (54.679,13.563,99.561)
P: (53.840,20.226,101.833)
C4': (51.965,17.352,100.187)
C2': (51.802,15.088,99.416)
C2: (54.824,11.575,98.627)
N1: (55.835,11.151,99.401)
N3: (54.180,12.745,98.624)
N6: (57.316,11.591,101.105)
N7: (55.964,14.355,101.259)
N9: (54.259,14.833,99.871)
O5': (52.663,19.541,100.994)
O3': (49.818,16.194,100.348)
Image (generated by PyMOL):