Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A158:A141
Extra
PDB:
ATOM 1 O3' G A 157 106.805 19.190 -1.703 1.00 60.50 O
ATOM 2 P C A 158 105.785 20.426 -1.854 1.00 63.93 P
ATOM 3 OP1 C A 158 104.455 19.852 -2.233 1.00 83.34 O
ATOM 4 OP2 C A 158 106.406 21.471 -2.714 1.00 83.34 O
ATOM 5 O5' C A 158 105.672 21.027 -0.384 1.00 63.93 O
ATOM 6 C5' C A 158 104.970 20.313 0.626 1.00 63.93 C
ATOM 7 C4' C A 158 104.822 21.147 1.868 1.00 63.93 C
ATOM 8 O4' C A 158 106.118 21.402 2.463 1.00 63.93 O
ATOM 9 C3' C A 158 104.213 22.532 1.748 1.00 63.93 C
ATOM 10 O3' C A 158 102.792 22.501 1.678 1.00 63.93 O
ATOM 11 C2' C A 158 104.649 23.174 3.060 1.00 63.93 C
ATOM 12 O2' C A 158 103.796 22.776 4.114 1.00 63.93 O
ATOM 13 C1' C A 158 106.024 22.545 3.292 1.00 63.93 C
ATOM 14 N1 C A 158 107.148 23.463 3.024 1.00 83.34 N
ATOM 15 C2 C A 158 107.639 24.239 4.082 1.00 83.34 C
ATOM 16 O2 C A 158 107.144 24.103 5.212 1.00 83.34 O
ATOM 17 N3 C A 158 108.638 25.119 3.851 1.00 83.34 N
ATOM 18 C4 C A 158 109.150 25.239 2.628 1.00 83.34 C
ATOM 19 N4 C A 158 110.122 26.135 2.447 1.00 83.34 N
ATOM 20 C5 C A 158 108.685 24.449 1.535 1.00 83.34 C
ATOM 21 C6 C A 158 107.694 23.579 1.777 1.00 83.34 C
ATOM 22 P U A 159 102.000 23.760 1.056 1.00 58.22 P
ATOM 23 OP1 U A 159 100.536 23.479 1.105 1.00 52.58 O
ATOM 24 OP2 U A 159 102.640 24.086 -0.244 1.00 52.58 O
ATOM 25 O5' U A 159 102.310 24.962 2.056 1.00 58.22 O
TER
ATOM 1 O3' A B 140 115.571 30.543 2.806 1.00 52.34 O
ATOM 2 P A B 141 116.131 29.420 3.794 1.00 46.04 P
ATOM 3 OP1 A B 141 117.564 29.672 4.086 1.00 55.13 O
ATOM 4 OP2 A B 141 115.722 28.112 3.229 1.00 55.13 O
ATOM 5 O5' A B 141 115.311 29.670 5.141 1.00 46.04 O
ATOM 6 C5' A B 141 115.555 30.842 5.925 1.00 46.04 C
ATOM 7 C4' A B 141 114.456 31.055 6.931 1.00 46.04 C
ATOM 8 O4' A B 141 113.187 31.167 6.248 1.00 46.04 O
ATOM 9 C3' A B 141 114.198 29.959 7.950 1.00 46.04 C
ATOM 10 O3' A B 141 115.112 29.992 9.039 1.00 46.04 O
ATOM 11 C2' A B 141 112.783 30.282 8.419 1.00 46.04 C
ATOM 12 O2' A B 141 112.746 31.268 9.428 1.00 46.04 O
ATOM 13 C1' A B 141 112.147 30.856 7.155 1.00 46.04 C
ATOM 14 N9 A B 141 111.234 29.908 6.536 1.00 55.13 N
ATOM 15 C8 A B 141 111.422 29.116 5.436 1.00 55.13 C
ATOM 16 N7 A B 141 110.403 28.335 5.170 1.00 55.13 N
ATOM 17 C5 A B 141 109.481 28.645 6.158 1.00 55.13 C
ATOM 18 C6 A B 141 108.197 28.161 6.434 1.00 55.13 C
ATOM 19 N6 A B 141 107.605 27.201 5.729 1.00 55.13 N
ATOM 20 N1 A B 141 107.536 28.695 7.479 1.00 55.13 N
ATOM 21 C2 A B 141 108.145 29.640 8.202 1.00 55.13 C
ATOM 22 N3 A B 141 109.357 30.167 8.050 1.00 55.13 N
ATOM 23 C4 A B 141 109.977 29.620 6.997 1.00 55.13 C
ATOM 24 P C B 142 115.941 28.666 9.407 1.00 68.84 P
ATOM 25 OP1 C B 142 116.571 28.841 10.735 1.00 60.65 O
ATOM 26 OP2 C B 142 116.788 28.317 8.238 1.00 60.65 O
ATOM 27 O5' C B 142 114.813 27.552 9.538 1.00 68.84 O
TER
ATOM 2 P C A 158 105.785 20.426 -1.854 1.00 63.93 P
ATOM 3 OP1 C A 158 104.455 19.852 -2.233 1.00 83.34 O
ATOM 4 OP2 C A 158 106.406 21.471 -2.714 1.00 83.34 O
ATOM 5 O5' C A 158 105.672 21.027 -0.384 1.00 63.93 O
ATOM 6 C5' C A 158 104.970 20.313 0.626 1.00 63.93 C
ATOM 7 C4' C A 158 104.822 21.147 1.868 1.00 63.93 C
ATOM 8 O4' C A 158 106.118 21.402 2.463 1.00 63.93 O
ATOM 9 C3' C A 158 104.213 22.532 1.748 1.00 63.93 C
ATOM 10 O3' C A 158 102.792 22.501 1.678 1.00 63.93 O
ATOM 11 C2' C A 158 104.649 23.174 3.060 1.00 63.93 C
ATOM 12 O2' C A 158 103.796 22.776 4.114 1.00 63.93 O
ATOM 13 C1' C A 158 106.024 22.545 3.292 1.00 63.93 C
ATOM 14 N1 C A 158 107.148 23.463 3.024 1.00 83.34 N
ATOM 15 C2 C A 158 107.639 24.239 4.082 1.00 83.34 C
ATOM 16 O2 C A 158 107.144 24.103 5.212 1.00 83.34 O
ATOM 17 N3 C A 158 108.638 25.119 3.851 1.00 83.34 N
ATOM 18 C4 C A 158 109.150 25.239 2.628 1.00 83.34 C
ATOM 19 N4 C A 158 110.122 26.135 2.447 1.00 83.34 N
ATOM 20 C5 C A 158 108.685 24.449 1.535 1.00 83.34 C
ATOM 21 C6 C A 158 107.694 23.579 1.777 1.00 83.34 C
ATOM 22 P U A 159 102.000 23.760 1.056 1.00 58.22 P
ATOM 23 OP1 U A 159 100.536 23.479 1.105 1.00 52.58 O
ATOM 24 OP2 U A 159 102.640 24.086 -0.244 1.00 52.58 O
ATOM 25 O5' U A 159 102.310 24.962 2.056 1.00 58.22 O
TER
ATOM 1 O3' A B 140 115.571 30.543 2.806 1.00 52.34 O
ATOM 2 P A B 141 116.131 29.420 3.794 1.00 46.04 P
ATOM 3 OP1 A B 141 117.564 29.672 4.086 1.00 55.13 O
ATOM 4 OP2 A B 141 115.722 28.112 3.229 1.00 55.13 O
ATOM 5 O5' A B 141 115.311 29.670 5.141 1.00 46.04 O
ATOM 6 C5' A B 141 115.555 30.842 5.925 1.00 46.04 C
ATOM 7 C4' A B 141 114.456 31.055 6.931 1.00 46.04 C
ATOM 8 O4' A B 141 113.187 31.167 6.248 1.00 46.04 O
ATOM 9 C3' A B 141 114.198 29.959 7.950 1.00 46.04 C
ATOM 10 O3' A B 141 115.112 29.992 9.039 1.00 46.04 O
ATOM 11 C2' A B 141 112.783 30.282 8.419 1.00 46.04 C
ATOM 12 O2' A B 141 112.746 31.268 9.428 1.00 46.04 O
ATOM 13 C1' A B 141 112.147 30.856 7.155 1.00 46.04 C
ATOM 14 N9 A B 141 111.234 29.908 6.536 1.00 55.13 N
ATOM 15 C8 A B 141 111.422 29.116 5.436 1.00 55.13 C
ATOM 16 N7 A B 141 110.403 28.335 5.170 1.00 55.13 N
ATOM 17 C5 A B 141 109.481 28.645 6.158 1.00 55.13 C
ATOM 18 C6 A B 141 108.197 28.161 6.434 1.00 55.13 C
ATOM 19 N6 A B 141 107.605 27.201 5.729 1.00 55.13 N
ATOM 20 N1 A B 141 107.536 28.695 7.479 1.00 55.13 N
ATOM 21 C2 A B 141 108.145 29.640 8.202 1.00 55.13 C
ATOM 22 N3 A B 141 109.357 30.167 8.050 1.00 55.13 N
ATOM 23 C4 A B 141 109.977 29.620 6.997 1.00 55.13 C
ATOM 24 P C B 142 115.941 28.666 9.407 1.00 68.84 P
ATOM 25 OP1 C B 142 116.571 28.841 10.735 1.00 60.65 O
ATOM 26 OP2 C B 142 116.788 28.317 8.238 1.00 60.65 O
ATOM 27 O5' C B 142 114.813 27.552 9.538 1.00 68.84 O
TER
Atoms:
C2: (107.639,24.239,4.082)
OP1: (104.455,19.852,-2.233)
OP2: (106.406,21.471,-2.714)
C4: (109.150,25.239,2.628)
O5': (105.672,21.027,-0.384)
C3': (104.213,22.532,1.748)
C1': (106.024,22.545,3.292)
O4': (106.118,21.402,2.463)
C5': (104.970,20.313,0.626)
P: (105.785,20.426,-1.854)
O2: (107.144,24.103,5.212)
C4': (104.822,21.147,1.868)
C2': (104.649,23.174,3.060)
O2': (103.796,22.776,4.114)
N1: (107.148,23.463,3.024)
N3: (108.638,25.119,3.851)
N4: (110.122,26.135,2.447)
C6: (107.694,23.579,1.777)
C5: (108.685,24.449,1.535)
O3': (102.792,22.501,1.678)
OP1: (104.455,19.852,-2.233)
OP2: (106.406,21.471,-2.714)
C4: (109.150,25.239,2.628)
O5': (105.672,21.027,-0.384)
C3': (104.213,22.532,1.748)
C1': (106.024,22.545,3.292)
O4': (106.118,21.402,2.463)
C5': (104.970,20.313,0.626)
P: (105.785,20.426,-1.854)
O2: (107.144,24.103,5.212)
C4': (104.822,21.147,1.868)
C2': (104.649,23.174,3.060)
O2': (103.796,22.776,4.114)
N1: (107.148,23.463,3.024)
N3: (108.638,25.119,3.851)
N4: (110.122,26.135,2.447)
C6: (107.694,23.579,1.777)
C5: (108.685,24.449,1.535)
O3': (102.792,22.501,1.678)
OP1: (117.564,29.672,4.086)
OP2: (115.722,28.112,3.229)
C3': (114.198,29.959,7.950)
C1': (112.147,30.856,7.155)
C5': (115.555,30.842,5.925)
O4': (113.187,31.167,6.248)
C8: (111.422,29.116,5.436)
O2': (112.746,31.268,9.428)
C6: (108.197,28.161,6.434)
C5: (109.481,28.645,6.158)
C4: (109.977,29.620,6.997)
P: (116.131,29.420,3.794)
C4': (114.456,31.055,6.931)
C2': (112.783,30.282,8.419)
C2: (108.145,29.640,8.202)
N1: (107.536,28.695,7.479)
N3: (109.357,30.167,8.050)
N6: (107.605,27.201,5.729)
N7: (110.403,28.335,5.170)
N9: (111.234,29.908,6.536)
O5': (115.311,29.670,5.141)
O3': (115.112,29.992,9.039)
OP2: (115.722,28.112,3.229)
C3': (114.198,29.959,7.950)
C1': (112.147,30.856,7.155)
C5': (115.555,30.842,5.925)
O4': (113.187,31.167,6.248)
C8: (111.422,29.116,5.436)
O2': (112.746,31.268,9.428)
C6: (108.197,28.161,6.434)
C5: (109.481,28.645,6.158)
C4: (109.977,29.620,6.997)
P: (116.131,29.420,3.794)
C4': (114.456,31.055,6.931)
C2': (112.783,30.282,8.419)
C2: (108.145,29.640,8.202)
N1: (107.536,28.695,7.479)
N3: (109.357,30.167,8.050)
N6: (107.605,27.201,5.729)
N7: (110.403,28.335,5.170)
N9: (111.234,29.908,6.536)
O5': (115.311,29.670,5.141)
O3': (115.112,29.992,9.039)
Image (generated by PyMOL):