Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01002:0913
Extra
PDB:
ATOM 1 O3' U A1001 48.826 95.784 82.447 1.00 28.45 O
ATOM 2 P C A1002 50.359 96.226 82.601 1.00 27.63 P
ATOM 3 OP1 C A1002 50.541 96.863 83.927 1.00 23.86 O
ATOM 4 OP2 C A1002 50.723 96.965 81.355 1.00 27.75 O
ATOM 5 O5' C A1002 51.146 94.844 82.602 1.00 25.99 O
ATOM 6 C5' C A1002 50.951 93.903 83.659 1.00 28.67 C
ATOM 7 C4' C A1002 51.957 92.801 83.549 1.00 30.29 C
ATOM 8 O4' C A1002 51.711 92.055 82.341 1.00 32.40 O
ATOM 9 C3' C A1002 53.379 93.278 83.335 1.00 32.72 C
ATOM 10 O3' C A1002 53.941 93.694 84.578 1.00 36.32 O
ATOM 11 C2' C A1002 54.046 92.024 82.781 1.00 32.58 C
ATOM 12 O2' C A1002 54.377 91.094 83.787 1.00 35.67 O
ATOM 13 C1' C A1002 52.915 91.412 81.954 1.00 32.17 C
ATOM 14 N1 C A1002 53.093 91.545 80.499 1.00 33.54 N
ATOM 15 C2 C A1002 53.919 90.629 79.841 1.00 34.53 C
ATOM 16 O2 C A1002 54.503 89.745 80.507 1.00 36.95 O
ATOM 17 N3 C A1002 54.077 90.729 78.504 1.00 34.05 N
ATOM 18 C4 C A1002 53.467 91.702 77.832 1.00 32.26 C
ATOM 19 N4 C A1002 53.665 91.761 76.508 1.00 34.57 N
ATOM 20 C5 C A1002 52.631 92.655 78.478 1.00 31.36 C
ATOM 21 C6 C A1002 52.468 92.538 79.797 1.00 31.86 C
ATOM 22 P C A1003 55.055 94.857 84.617 1.00 36.01 P
ATOM 23 OP1 C A1003 55.523 95.174 83.230 1.00 36.38 O
ATOM 24 OP2 C A1003 56.038 94.408 85.646 1.00 36.90 O
ATOM 25 O5' C A1003 54.302 96.160 85.148 1.00 34.29 O
TER
ATOM 1 O3' C B 912 55.272 94.034 70.914 1.00 33.05 O
ATOM 2 P A B 913 53.876 93.236 70.878 1.00 32.61 P
ATOM 3 OP1 A B 913 53.161 93.694 69.642 1.00 31.67 O
ATOM 4 OP2 A B 913 53.207 93.368 72.214 1.00 30.67 O
ATOM 5 O5' A B 913 54.346 91.726 70.677 1.00 29.50 O
ATOM 6 C5' A B 913 55.117 91.371 69.519 1.00 31.21 C
ATOM 7 C4' A B 913 55.779 90.027 69.704 1.00 32.54 C
ATOM 8 O4' A B 913 56.758 90.098 70.771 1.00 33.90 O
ATOM 9 C3' A B 913 54.880 88.875 70.111 1.00 33.18 C
ATOM 10 O3' A B 913 54.173 88.338 68.998 1.00 34.33 O
ATOM 11 C2' A B 913 55.893 87.898 70.684 1.00 33.02 C
ATOM 12 O2' A B 913 56.647 87.301 69.649 1.00 34.54 O
ATOM 13 C1' A B 913 56.817 88.849 71.444 1.00 31.88 C
ATOM 14 N9 A B 913 56.431 89.063 72.843 1.00 31.60 N
ATOM 15 C8 A B 913 55.739 90.126 73.390 1.00 29.88 C
ATOM 16 N7 A B 913 55.602 90.051 74.694 1.00 28.85 N
ATOM 17 C5 A B 913 56.230 88.854 75.026 1.00 28.41 C
ATOM 18 C6 A B 913 56.431 88.197 76.256 1.00 28.98 C
ATOM 19 N6 A B 913 56.026 88.679 77.436 1.00 28.41 N
ATOM 20 N1 A B 913 57.073 87.010 76.234 1.00 30.35 N
ATOM 21 C2 A B 913 57.487 86.522 75.058 1.00 28.79 C
ATOM 22 N3 A B 913 57.369 87.047 73.844 1.00 30.19 N
ATOM 23 C4 A B 913 56.726 88.228 73.897 1.00 29.36 C
ATOM 24 P U B 914 52.685 87.765 69.206 1.00 36.80 P
ATOM 25 OP1 U B 914 52.149 87.399 67.869 1.00 38.43 O
ATOM 26 OP2 U B 914 51.917 88.713 70.068 1.00 35.04 O
ATOM 27 O5' U B 914 52.931 86.419 70.024 1.00 36.87 O
TER
ATOM 2 P C A1002 50.359 96.226 82.601 1.00 27.63 P
ATOM 3 OP1 C A1002 50.541 96.863 83.927 1.00 23.86 O
ATOM 4 OP2 C A1002 50.723 96.965 81.355 1.00 27.75 O
ATOM 5 O5' C A1002 51.146 94.844 82.602 1.00 25.99 O
ATOM 6 C5' C A1002 50.951 93.903 83.659 1.00 28.67 C
ATOM 7 C4' C A1002 51.957 92.801 83.549 1.00 30.29 C
ATOM 8 O4' C A1002 51.711 92.055 82.341 1.00 32.40 O
ATOM 9 C3' C A1002 53.379 93.278 83.335 1.00 32.72 C
ATOM 10 O3' C A1002 53.941 93.694 84.578 1.00 36.32 O
ATOM 11 C2' C A1002 54.046 92.024 82.781 1.00 32.58 C
ATOM 12 O2' C A1002 54.377 91.094 83.787 1.00 35.67 O
ATOM 13 C1' C A1002 52.915 91.412 81.954 1.00 32.17 C
ATOM 14 N1 C A1002 53.093 91.545 80.499 1.00 33.54 N
ATOM 15 C2 C A1002 53.919 90.629 79.841 1.00 34.53 C
ATOM 16 O2 C A1002 54.503 89.745 80.507 1.00 36.95 O
ATOM 17 N3 C A1002 54.077 90.729 78.504 1.00 34.05 N
ATOM 18 C4 C A1002 53.467 91.702 77.832 1.00 32.26 C
ATOM 19 N4 C A1002 53.665 91.761 76.508 1.00 34.57 N
ATOM 20 C5 C A1002 52.631 92.655 78.478 1.00 31.36 C
ATOM 21 C6 C A1002 52.468 92.538 79.797 1.00 31.86 C
ATOM 22 P C A1003 55.055 94.857 84.617 1.00 36.01 P
ATOM 23 OP1 C A1003 55.523 95.174 83.230 1.00 36.38 O
ATOM 24 OP2 C A1003 56.038 94.408 85.646 1.00 36.90 O
ATOM 25 O5' C A1003 54.302 96.160 85.148 1.00 34.29 O
TER
ATOM 1 O3' C B 912 55.272 94.034 70.914 1.00 33.05 O
ATOM 2 P A B 913 53.876 93.236 70.878 1.00 32.61 P
ATOM 3 OP1 A B 913 53.161 93.694 69.642 1.00 31.67 O
ATOM 4 OP2 A B 913 53.207 93.368 72.214 1.00 30.67 O
ATOM 5 O5' A B 913 54.346 91.726 70.677 1.00 29.50 O
ATOM 6 C5' A B 913 55.117 91.371 69.519 1.00 31.21 C
ATOM 7 C4' A B 913 55.779 90.027 69.704 1.00 32.54 C
ATOM 8 O4' A B 913 56.758 90.098 70.771 1.00 33.90 O
ATOM 9 C3' A B 913 54.880 88.875 70.111 1.00 33.18 C
ATOM 10 O3' A B 913 54.173 88.338 68.998 1.00 34.33 O
ATOM 11 C2' A B 913 55.893 87.898 70.684 1.00 33.02 C
ATOM 12 O2' A B 913 56.647 87.301 69.649 1.00 34.54 O
ATOM 13 C1' A B 913 56.817 88.849 71.444 1.00 31.88 C
ATOM 14 N9 A B 913 56.431 89.063 72.843 1.00 31.60 N
ATOM 15 C8 A B 913 55.739 90.126 73.390 1.00 29.88 C
ATOM 16 N7 A B 913 55.602 90.051 74.694 1.00 28.85 N
ATOM 17 C5 A B 913 56.230 88.854 75.026 1.00 28.41 C
ATOM 18 C6 A B 913 56.431 88.197 76.256 1.00 28.98 C
ATOM 19 N6 A B 913 56.026 88.679 77.436 1.00 28.41 N
ATOM 20 N1 A B 913 57.073 87.010 76.234 1.00 30.35 N
ATOM 21 C2 A B 913 57.487 86.522 75.058 1.00 28.79 C
ATOM 22 N3 A B 913 57.369 87.047 73.844 1.00 30.19 N
ATOM 23 C4 A B 913 56.726 88.228 73.897 1.00 29.36 C
ATOM 24 P U B 914 52.685 87.765 69.206 1.00 36.80 P
ATOM 25 OP1 U B 914 52.149 87.399 67.869 1.00 38.43 O
ATOM 26 OP2 U B 914 51.917 88.713 70.068 1.00 35.04 O
ATOM 27 O5' U B 914 52.931 86.419 70.024 1.00 36.87 O
TER
Atoms:
C2: (53.919,90.629,79.841)
OP1: (50.541,96.863,83.927)
OP2: (50.723,96.965,81.355)
C4: (53.467,91.702,77.832)
O5': (51.146,94.844,82.602)
C3': (53.379,93.278,83.335)
C1': (52.915,91.412,81.954)
O4': (51.711,92.055,82.341)
C5': (50.951,93.903,83.659)
P: (50.359,96.226,82.601)
O2: (54.503,89.745,80.507)
C4': (51.957,92.801,83.549)
C2': (54.046,92.024,82.781)
O2': (54.377,91.094,83.787)
N1: (53.093,91.545,80.499)
N3: (54.077,90.729,78.504)
N4: (53.665,91.761,76.508)
C6: (52.468,92.538,79.797)
C5: (52.631,92.655,78.478)
O3': (53.941,93.694,84.578)
OP1: (50.541,96.863,83.927)
OP2: (50.723,96.965,81.355)
C4: (53.467,91.702,77.832)
O5': (51.146,94.844,82.602)
C3': (53.379,93.278,83.335)
C1': (52.915,91.412,81.954)
O4': (51.711,92.055,82.341)
C5': (50.951,93.903,83.659)
P: (50.359,96.226,82.601)
O2: (54.503,89.745,80.507)
C4': (51.957,92.801,83.549)
C2': (54.046,92.024,82.781)
O2': (54.377,91.094,83.787)
N1: (53.093,91.545,80.499)
N3: (54.077,90.729,78.504)
N4: (53.665,91.761,76.508)
C6: (52.468,92.538,79.797)
C5: (52.631,92.655,78.478)
O3': (53.941,93.694,84.578)
OP1: (53.161,93.694,69.642)
OP2: (53.207,93.368,72.214)
C3': (54.880,88.875,70.111)
C1': (56.817,88.849,71.444)
C5': (55.117,91.371,69.519)
O4': (56.758,90.098,70.771)
C8: (55.739,90.126,73.390)
O2': (56.647,87.301,69.649)
C6: (56.431,88.197,76.256)
C5: (56.230,88.854,75.026)
C4: (56.726,88.228,73.897)
P: (53.876,93.236,70.878)
C4': (55.779,90.027,69.704)
C2': (55.893,87.898,70.684)
C2: (57.487,86.522,75.058)
N1: (57.073,87.010,76.234)
N3: (57.369,87.047,73.844)
N6: (56.026,88.679,77.436)
N7: (55.602,90.051,74.694)
N9: (56.431,89.063,72.843)
O5': (54.346,91.726,70.677)
O3': (54.173,88.338,68.998)
OP2: (53.207,93.368,72.214)
C3': (54.880,88.875,70.111)
C1': (56.817,88.849,71.444)
C5': (55.117,91.371,69.519)
O4': (56.758,90.098,70.771)
C8: (55.739,90.126,73.390)
O2': (56.647,87.301,69.649)
C6: (56.431,88.197,76.256)
C5: (56.230,88.854,75.026)
C4: (56.726,88.228,73.897)
P: (53.876,93.236,70.878)
C4': (55.779,90.027,69.704)
C2': (55.893,87.898,70.684)
C2: (57.487,86.522,75.058)
N1: (57.073,87.010,76.234)
N3: (57.369,87.047,73.844)
N6: (56.026,88.679,77.436)
N7: (55.602,90.051,74.694)
N9: (56.431,89.063,72.843)
O5': (54.346,91.726,70.677)
O3': (54.173,88.338,68.998)
Image (generated by PyMOL):