Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:H54:H16
Extra
PDB:
ATOM 1 O3' C A 53 -19.319 59.469 98.235 1.00 63.13 O
ATOM 2 P G A 54 -17.727 59.458 98.007 1.00 64.60 P
ATOM 3 OP1 G A 54 -17.056 59.568 99.326 1.00 64.52 O
ATOM 4 OP2 G A 54 -17.421 60.449 96.943 1.00 63.99 O
ATOM 5 O5' G A 54 -17.439 58.006 97.426 1.00 65.78 O
ATOM 6 C5' G A 54 -16.720 57.843 96.213 1.00 65.78 C
ATOM 7 C4' G A 54 -17.418 56.844 95.326 1.00 66.08 C
ATOM 8 O4' G A 54 -18.810 57.221 95.164 1.00 66.27 O
ATOM 9 C3' G A 54 -16.862 56.781 93.916 1.00 66.12 C
ATOM 10 O3' G A 54 -15.759 55.882 93.880 1.00 64.59 O
ATOM 11 C2' G A 54 -18.058 56.285 93.111 1.00 66.24 C
ATOM 12 O2' G A 54 -18.221 54.883 93.175 1.00 66.80 O
ATOM 13 C1' G A 54 -19.221 56.973 93.832 1.00 67.19 C
ATOM 14 N9 G A 54 -19.624 58.247 93.244 1.00 69.35 N
ATOM 15 C8 G A 54 -19.547 59.485 93.835 1.00 70.47 C
ATOM 16 N7 G A 54 -19.990 60.446 93.071 1.00 70.80 N
ATOM 17 C5 G A 54 -20.384 59.806 91.905 1.00 69.66 C
ATOM 18 C6 G A 54 -20.946 60.332 90.714 1.00 69.57 C
ATOM 19 O6 G A 54 -21.219 61.509 90.443 1.00 68.85 O
ATOM 20 N1 G A 54 -21.192 59.331 89.780 1.00 69.26 N
ATOM 21 C2 G A 54 -20.932 57.997 89.966 1.00 68.63 C
ATOM 22 N2 G A 54 -21.236 57.188 88.941 1.00 68.48 N
ATOM 23 N3 G A 54 -20.411 57.492 91.073 1.00 68.93 N
ATOM 24 C4 G A 54 -20.163 58.447 91.994 1.00 69.42 C
ATOM 25 P A A 55 -14.400 56.319 93.145 1.00 63.41 P
ATOM 26 OP1 A A 55 -13.279 55.525 93.707 1.00 63.84 O
ATOM 27 OP2 A A 55 -14.339 57.802 93.179 1.00 63.33 O
ATOM 28 O5' A A 55 -14.633 55.866 91.638 1.00 63.66 O
TER
ATOM 1 O3' C B 15 -22.355 57.491 79.652 1.00 85.71 O
ATOM 2 P G B 16 -22.092 58.568 80.817 1.00 85.56 P
ATOM 3 OP1 G B 16 -23.108 58.332 81.874 1.00 86.14 O
ATOM 4 OP2 G B 16 -21.978 59.912 80.197 1.00 85.28 O
ATOM 5 O5' G B 16 -20.666 58.167 81.402 1.00 84.44 O
ATOM 6 C5' G B 16 -20.040 58.954 82.412 1.00 84.37 C
ATOM 7 C4' G B 16 -19.899 58.148 83.681 1.00 84.68 C
ATOM 8 O4' G B 16 -19.044 58.862 84.612 1.00 84.63 O
ATOM 9 C3' G B 16 -21.209 57.865 84.411 1.00 84.83 C
ATOM 10 O3' G B 16 -21.130 56.573 84.998 1.00 85.18 O
ATOM 11 C2' G B 16 -21.223 58.925 85.509 1.00 84.52 C
ATOM 12 O2' G B 16 -21.965 58.547 86.651 1.00 84.65 O
ATOM 13 C1' G B 16 -19.734 59.072 85.824 1.00 84.36 C
ATOM 14 N9 G B 16 -19.373 60.391 86.333 1.00 84.56 N
ATOM 15 C8 G B 16 -19.535 61.600 85.700 1.00 85.09 C
ATOM 16 N7 G B 16 -19.108 62.609 86.408 1.00 85.26 N
ATOM 17 C5 G B 16 -18.636 62.033 87.580 1.00 85.37 C
ATOM 18 C6 G B 16 -18.049 62.628 88.728 1.00 85.79 C
ATOM 19 O6 G B 16 -17.821 63.824 88.945 1.00 87.46 O
ATOM 20 N1 G B 16 -17.714 61.675 89.683 1.00 85.16 N
ATOM 21 C2 G B 16 -17.914 60.323 89.555 1.00 84.16 C
ATOM 22 N2 G B 16 -17.520 59.566 90.589 1.00 82.77 N
ATOM 23 N3 G B 16 -18.460 59.756 88.491 1.00 84.18 N
ATOM 24 C4 G B 16 -18.794 60.664 87.550 1.00 84.67 C
ATOM 25 P G B 17 -22.215 55.453 84.610 1.00 85.86 P
ATOM 26 OP1 G B 17 -21.819 54.880 83.298 1.00 84.33 O
ATOM 27 OP2 G B 17 -23.571 56.033 84.778 1.00 86.24 O
ATOM 28 O5' G B 17 -22.006 54.332 85.721 1.00 86.31 O
TER
ATOM 2 P G A 54 -17.727 59.458 98.007 1.00 64.60 P
ATOM 3 OP1 G A 54 -17.056 59.568 99.326 1.00 64.52 O
ATOM 4 OP2 G A 54 -17.421 60.449 96.943 1.00 63.99 O
ATOM 5 O5' G A 54 -17.439 58.006 97.426 1.00 65.78 O
ATOM 6 C5' G A 54 -16.720 57.843 96.213 1.00 65.78 C
ATOM 7 C4' G A 54 -17.418 56.844 95.326 1.00 66.08 C
ATOM 8 O4' G A 54 -18.810 57.221 95.164 1.00 66.27 O
ATOM 9 C3' G A 54 -16.862 56.781 93.916 1.00 66.12 C
ATOM 10 O3' G A 54 -15.759 55.882 93.880 1.00 64.59 O
ATOM 11 C2' G A 54 -18.058 56.285 93.111 1.00 66.24 C
ATOM 12 O2' G A 54 -18.221 54.883 93.175 1.00 66.80 O
ATOM 13 C1' G A 54 -19.221 56.973 93.832 1.00 67.19 C
ATOM 14 N9 G A 54 -19.624 58.247 93.244 1.00 69.35 N
ATOM 15 C8 G A 54 -19.547 59.485 93.835 1.00 70.47 C
ATOM 16 N7 G A 54 -19.990 60.446 93.071 1.00 70.80 N
ATOM 17 C5 G A 54 -20.384 59.806 91.905 1.00 69.66 C
ATOM 18 C6 G A 54 -20.946 60.332 90.714 1.00 69.57 C
ATOM 19 O6 G A 54 -21.219 61.509 90.443 1.00 68.85 O
ATOM 20 N1 G A 54 -21.192 59.331 89.780 1.00 69.26 N
ATOM 21 C2 G A 54 -20.932 57.997 89.966 1.00 68.63 C
ATOM 22 N2 G A 54 -21.236 57.188 88.941 1.00 68.48 N
ATOM 23 N3 G A 54 -20.411 57.492 91.073 1.00 68.93 N
ATOM 24 C4 G A 54 -20.163 58.447 91.994 1.00 69.42 C
ATOM 25 P A A 55 -14.400 56.319 93.145 1.00 63.41 P
ATOM 26 OP1 A A 55 -13.279 55.525 93.707 1.00 63.84 O
ATOM 27 OP2 A A 55 -14.339 57.802 93.179 1.00 63.33 O
ATOM 28 O5' A A 55 -14.633 55.866 91.638 1.00 63.66 O
TER
ATOM 1 O3' C B 15 -22.355 57.491 79.652 1.00 85.71 O
ATOM 2 P G B 16 -22.092 58.568 80.817 1.00 85.56 P
ATOM 3 OP1 G B 16 -23.108 58.332 81.874 1.00 86.14 O
ATOM 4 OP2 G B 16 -21.978 59.912 80.197 1.00 85.28 O
ATOM 5 O5' G B 16 -20.666 58.167 81.402 1.00 84.44 O
ATOM 6 C5' G B 16 -20.040 58.954 82.412 1.00 84.37 C
ATOM 7 C4' G B 16 -19.899 58.148 83.681 1.00 84.68 C
ATOM 8 O4' G B 16 -19.044 58.862 84.612 1.00 84.63 O
ATOM 9 C3' G B 16 -21.209 57.865 84.411 1.00 84.83 C
ATOM 10 O3' G B 16 -21.130 56.573 84.998 1.00 85.18 O
ATOM 11 C2' G B 16 -21.223 58.925 85.509 1.00 84.52 C
ATOM 12 O2' G B 16 -21.965 58.547 86.651 1.00 84.65 O
ATOM 13 C1' G B 16 -19.734 59.072 85.824 1.00 84.36 C
ATOM 14 N9 G B 16 -19.373 60.391 86.333 1.00 84.56 N
ATOM 15 C8 G B 16 -19.535 61.600 85.700 1.00 85.09 C
ATOM 16 N7 G B 16 -19.108 62.609 86.408 1.00 85.26 N
ATOM 17 C5 G B 16 -18.636 62.033 87.580 1.00 85.37 C
ATOM 18 C6 G B 16 -18.049 62.628 88.728 1.00 85.79 C
ATOM 19 O6 G B 16 -17.821 63.824 88.945 1.00 87.46 O
ATOM 20 N1 G B 16 -17.714 61.675 89.683 1.00 85.16 N
ATOM 21 C2 G B 16 -17.914 60.323 89.555 1.00 84.16 C
ATOM 22 N2 G B 16 -17.520 59.566 90.589 1.00 82.77 N
ATOM 23 N3 G B 16 -18.460 59.756 88.491 1.00 84.18 N
ATOM 24 C4 G B 16 -18.794 60.664 87.550 1.00 84.67 C
ATOM 25 P G B 17 -22.215 55.453 84.610 1.00 85.86 P
ATOM 26 OP1 G B 17 -21.819 54.880 83.298 1.00 84.33 O
ATOM 27 OP2 G B 17 -23.571 56.033 84.778 1.00 86.24 O
ATOM 28 O5' G B 17 -22.006 54.332 85.721 1.00 86.31 O
TER
Atoms:
OP1: (-17.056,59.568,99.326)
OP2: (-17.421,60.449,96.943)
C3': (-16.862,56.781,93.916)
C1': (-19.221,56.973,93.832)
C5': (-16.720,57.843,96.213)
O6: (-21.219,61.509,90.443)
O4': (-18.810,57.221,95.164)
C8: (-19.547,59.485,93.835)
C2: (-20.932,57.997,89.966)
C6: (-20.946,60.332,90.714)
C5: (-20.384,59.806,91.905)
C4: (-20.163,58.447,91.994)
P: (-17.727,59.458,98.007)
C4': (-17.418,56.844,95.326)
C2': (-18.058,56.285,93.111)
O2': (-18.221,54.883,93.175)
N1: (-21.192,59.331,89.780)
N2: (-21.236,57.188,88.941)
N3: (-20.411,57.492,91.073)
N7: (-19.990,60.446,93.071)
N9: (-19.624,58.247,93.244)
O5': (-17.439,58.006,97.426)
O3': (-15.759,55.882,93.880)
OP2: (-17.421,60.449,96.943)
C3': (-16.862,56.781,93.916)
C1': (-19.221,56.973,93.832)
C5': (-16.720,57.843,96.213)
O6: (-21.219,61.509,90.443)
O4': (-18.810,57.221,95.164)
C8: (-19.547,59.485,93.835)
C2: (-20.932,57.997,89.966)
C6: (-20.946,60.332,90.714)
C5: (-20.384,59.806,91.905)
C4: (-20.163,58.447,91.994)
P: (-17.727,59.458,98.007)
C4': (-17.418,56.844,95.326)
C2': (-18.058,56.285,93.111)
O2': (-18.221,54.883,93.175)
N1: (-21.192,59.331,89.780)
N2: (-21.236,57.188,88.941)
N3: (-20.411,57.492,91.073)
N7: (-19.990,60.446,93.071)
N9: (-19.624,58.247,93.244)
O5': (-17.439,58.006,97.426)
O3': (-15.759,55.882,93.880)
OP1: (-23.108,58.332,81.874)
OP2: (-21.978,59.912,80.197)
C3': (-21.209,57.865,84.411)
C1': (-19.734,59.072,85.824)
C5': (-20.040,58.954,82.412)
O6: (-17.821,63.824,88.945)
O4': (-19.044,58.862,84.612)
C8: (-19.535,61.600,85.700)
C2: (-17.914,60.323,89.555)
C6: (-18.049,62.628,88.728)
C5: (-18.636,62.033,87.580)
C4: (-18.794,60.664,87.550)
P: (-22.092,58.568,80.817)
C4': (-19.899,58.148,83.681)
C2': (-21.223,58.925,85.509)
O2': (-21.965,58.547,86.651)
N1: (-17.714,61.675,89.683)
N2: (-17.520,59.566,90.589)
N3: (-18.460,59.756,88.491)
N7: (-19.108,62.609,86.408)
N9: (-19.373,60.391,86.333)
O5': (-20.666,58.167,81.402)
O3': (-21.130,56.573,84.998)
OP2: (-21.978,59.912,80.197)
C3': (-21.209,57.865,84.411)
C1': (-19.734,59.072,85.824)
C5': (-20.040,58.954,82.412)
O6: (-17.821,63.824,88.945)
O4': (-19.044,58.862,84.612)
C8: (-19.535,61.600,85.700)
C2: (-17.914,60.323,89.555)
C6: (-18.049,62.628,88.728)
C5: (-18.636,62.033,87.580)
C4: (-18.794,60.664,87.550)
P: (-22.092,58.568,80.817)
C4': (-19.899,58.148,83.681)
C2': (-21.223,58.925,85.509)
O2': (-21.965,58.547,86.651)
N1: (-17.714,61.675,89.683)
N2: (-17.520,59.566,90.589)
N3: (-18.460,59.756,88.491)
N7: (-19.108,62.609,86.408)
N9: (-19.373,60.391,86.333)
O5': (-20.666,58.167,81.402)
O3': (-21.130,56.573,84.998)
Image (generated by PyMOL):