ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3GCA:A27:A5

Extra

PDB:
ATOM 1 O3' A A 26 29.838 24.089 33.280 1.00 93.39 O
ATOM 2 P A A 27 30.782 23.155 32.396 1.00 97.25 P
ATOM 3 OP1 A A 27 30.552 21.779 32.909 1.00 96.54 O
ATOM 4 OP2 A A 27 32.156 23.734 32.391 1.00 97.51 O
ATOM 5 O5' A A 27 30.152 23.247 30.937 1.00 98.56 O
ATOM 6 C5' A A 27 28.914 22.600 30.651 1.00 99.76 C
ATOM 7 C4' A A 27 28.368 23.088 29.340 1.00100.60 C
ATOM 8 O4' A A 27 28.262 24.529 29.393 1.00100.07 O
ATOM 9 C3' A A 27 29.245 22.852 28.126 1.00101.46 C
ATOM 10 O3' A A 27 28.989 21.586 27.571 1.00103.70 O
ATOM 11 C2' A A 27 28.727 23.898 27.156 1.00100.83 C
ATOM 12 O2' A A 27 27.517 23.523 26.541 1.00102.71 O
ATOM 13 C1' A A 27 28.446 25.056 28.097 1.00 98.61 C
ATOM 14 N9 A A 27 29.586 25.935 28.125 1.00 95.11 N
ATOM 15 C8 A A 27 30.818 25.768 28.688 1.00 94.16 C
ATOM 16 N7 A A 27 31.597 26.802 28.544 1.00 93.29 N
ATOM 17 C5 A A 27 30.819 27.703 27.824 1.00 93.08 C
ATOM 18 C6 A A 27 31.058 28.992 27.352 1.00 93.14 C
ATOM 19 N6 A A 27 32.199 29.640 27.533 1.00 93.90 N
ATOM 20 N1 A A 27 30.065 29.608 26.672 1.00 92.11 N
ATOM 21 C2 A A 27 28.921 28.951 26.486 1.00 92.02 C
ATOM 22 N3 A A 27 28.583 27.738 26.881 1.00 92.74 N
ATOM 23 C4 A A 27 29.593 27.166 27.557 1.00 93.64 C
ATOM 24 P A A 28 29.783 21.140 26.261 1.00105.06 P
ATOM 25 OP1 A A 28 29.192 19.827 25.866 1.00104.62 O
ATOM 26 OP2 A A 28 31.233 21.249 26.566 1.00104.96 O
ATOM 27 O5' A A 28 29.434 22.243 25.161 1.00102.47 O
TER

ATOM 1 O3' G B 4 38.511 31.950 33.227 1.00 74.11 O
ATOM 2 P U B 5 39.398 30.918 32.373 1.00 74.85 P
ATOM 3 OP1 U B 5 40.662 30.695 33.125 1.00 74.77 O
ATOM 4 OP2 U B 5 39.456 31.444 30.985 1.00 74.03 O
ATOM 5 O5' U B 5 38.572 29.557 32.437 1.00 71.52 O
ATOM 6 C5' U B 5 38.513 28.825 33.653 1.00 73.59 C
ATOM 7 C4' U B 5 37.416 27.797 33.602 1.00 75.65 C
ATOM 8 O4' U B 5 36.145 28.455 33.413 1.00 76.70 O
ATOM 9 C3' U B 5 37.490 26.820 32.449 1.00 76.83 C
ATOM 10 O3' U B 5 38.386 25.777 32.768 1.00 79.22 O
ATOM 11 C2' U B 5 36.047 26.345 32.338 1.00 75.90 C
ATOM 12 O2' U B 5 35.649 25.400 33.307 1.00 76.80 O
ATOM 13 C1' U B 5 35.305 27.643 32.615 1.00 74.54 C
ATOM 14 N1 U B 5 35.096 28.339 31.355 1.00 70.84 N
ATOM 15 C2 U B 5 34.049 27.921 30.577 1.00 70.05 C
ATOM 16 O2 U B 5 33.298 27.017 30.907 1.00 70.43 O
ATOM 17 N3 U B 5 33.909 28.599 29.403 1.00 69.12 N
ATOM 18 C4 U B 5 34.697 29.629 28.955 1.00 69.68 C
ATOM 19 O4 U B 5 34.435 30.154 27.878 1.00 69.85 O
ATOM 20 C5 U B 5 35.766 30.000 29.835 1.00 70.15 C
ATOM 21 C6 U B 5 35.921 29.353 30.976 1.00 69.64 C
ATOM 22 P C B 6 39.541 25.392 31.731 1.00 81.40 P
ATOM 23 OP1 C B 6 40.331 24.254 32.305 1.00 80.43 O
ATOM 24 OP2 C B 6 40.226 26.657 31.338 1.00 78.53 O
ATOM 25 O5' C B 6 38.724 24.843 30.485 1.00 80.15 O
TER

Atoms:
OP1: (30.552,21.779,32.909)
OP2: (32.156,23.734,32.391)
C3': (29.245,22.852,28.126)
C1': (28.446,25.056,28.097)
C5': (28.914,22.600,30.651)
O4': (28.262,24.529,29.393)
C8: (30.818,25.768,28.688)
O2': (27.517,23.523,26.541)
C6: (31.058,28.992,27.352)
C5: (30.819,27.703,27.824)
C4: (29.593,27.166,27.557)
P: (30.782,23.155,32.396)
C4': (28.368,23.088,29.340)
C2': (28.727,23.898,27.156)
C2: (28.921,28.951,26.486)
N1: (30.065,29.608,26.672)
N3: (28.583,27.738,26.881)
N6: (32.199,29.640,27.533)
N7: (31.597,26.802,28.544)
N9: (29.586,25.935,28.125)
O5': (30.152,23.247,30.937)
O3': (28.989,21.586,27.571)
C4: (34.697,29.629,28.955)
N3: (33.909,28.599,29.403)
OP1: (40.662,30.695,33.125)
OP2: (39.456,31.444,30.985)
C2: (34.049,27.921,30.577)
C1': (35.305,27.643,32.615)
C3': (37.490,26.820,32.449)
O5': (38.572,29.557,32.437)
O4': (36.145,28.455,33.413)
C5': (38.513,28.825,33.653)
P: (39.398,30.918,32.373)
C4': (37.416,27.797,33.602)
C2': (36.047,26.345,32.338)
O2': (35.649,25.400,33.307)
N1: (35.096,28.339,31.355)
O4: (34.435,30.154,27.878)
O2: (33.298,27.017,30.907)
C6: (35.921,29.353,30.976)
C5: (35.766,30.000,29.835)
O3': (38.386,25.777,32.768)
Image (generated by PyMOL):
PyMOL image
show in jmol