Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02377:02326
Extra
PDB:
ATOM 1 O3' U A2376 55.897 116.833 94.193 1.00 38.75 O
ATOM 2 P C A2377 56.305 116.192 92.771 1.00 38.61 P
ATOM 3 OP1 C A2377 55.647 117.053 91.756 1.00 39.13 O
ATOM 4 OP2 C A2377 56.033 114.735 92.783 1.00 37.13 O
ATOM 5 O5' C A2377 57.885 116.377 92.659 1.00 36.66 O
ATOM 6 C5' C A2377 58.491 117.687 92.592 1.00 33.47 C
ATOM 7 C4' C A2377 59.938 117.567 92.176 1.00 34.03 C
ATOM 8 O4' C A2377 60.524 116.446 92.858 1.00 35.24 O
ATOM 9 C3' C A2377 60.195 117.217 90.714 1.00 34.86 C
ATOM 10 O3' C A2377 60.399 118.424 89.984 1.00 37.80 O
ATOM 11 C2' C A2377 61.503 116.405 90.734 1.00 34.16 C
ATOM 12 O2' C A2377 62.589 117.104 90.160 1.00 34.53 O
ATOM 13 C1' C A2377 61.747 116.182 92.231 1.00 33.16 C
ATOM 14 N1 C A2377 62.215 114.839 92.625 1.00 31.59 N
ATOM 15 C2 C A2377 63.373 114.741 93.405 1.00 29.49 C
ATOM 16 O2 C A2377 63.944 115.775 93.763 1.00 28.30 O
ATOM 17 N3 C A2377 63.839 113.525 93.747 1.00 30.18 N
ATOM 18 C4 C A2377 63.202 112.429 93.342 1.00 31.53 C
ATOM 19 N4 C A2377 63.727 111.251 93.673 1.00 31.86 N
ATOM 20 C5 C A2377 62.005 112.494 92.568 1.00 31.91 C
ATOM 21 C6 C A2377 61.551 113.708 92.235 1.00 31.19 C
ATOM 22 P G A2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 23 OP1 G A2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 24 OP2 G A2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 25 O5' G A2378 59.046 120.314 89.099 1.00 37.50 O
TER
ATOM 1 O3' U B2325 64.315 106.770 96.256 1.00 39.20 O
ATOM 2 P A B2326 64.064 106.783 97.841 1.00 40.39 P
ATOM 3 OP1 A B2326 63.858 105.369 98.261 1.00 38.92 O
ATOM 4 OP2 A B2326 63.032 107.795 98.160 1.00 40.49 O
ATOM 5 O5' A B2326 65.453 107.298 98.426 1.00 40.28 O
ATOM 6 C5' A B2326 66.592 106.425 98.490 1.00 40.01 C
ATOM 7 C4' A B2326 67.869 107.207 98.315 1.00 40.84 C
ATOM 8 O4' A B2326 67.965 107.716 96.959 1.00 41.51 O
ATOM 9 C3' A B2326 68.034 108.454 99.162 1.00 41.79 C
ATOM 10 O3' A B2326 68.407 108.173 100.499 1.00 41.97 O
ATOM 11 C2' A B2326 69.130 109.187 98.405 1.00 42.06 C
ATOM 12 O2' A B2326 70.412 108.623 98.615 1.00 43.85 O
ATOM 13 C1' A B2326 68.697 108.934 96.961 1.00 40.38 C
ATOM 14 N9 A B2326 67.833 110.010 96.476 1.00 38.85 N
ATOM 15 C8 A B2326 66.493 109.984 96.177 1.00 38.77 C
ATOM 16 N7 A B2326 66.017 111.139 95.775 1.00 38.14 N
ATOM 17 C5 A B2326 67.120 111.982 95.808 1.00 39.27 C
ATOM 18 C6 A B2326 67.286 113.345 95.498 1.00 38.54 C
ATOM 19 N6 A B2326 66.305 114.137 95.067 1.00 36.80 N
ATOM 20 N1 A B2326 68.519 113.875 95.647 1.00 39.32 N
ATOM 21 C2 A B2326 69.510 113.088 96.072 1.00 37.95 C
ATOM 22 N3 A B2326 69.483 111.799 96.389 1.00 39.69 N
ATOM 23 C4 A B2326 68.244 111.298 96.236 1.00 40.14 C
ATOM 24 P A B2327 68.063 109.235 101.656 1.00 45.41 P
ATOM 25 OP1 A B2327 68.641 108.676 102.915 1.00 46.08 O
ATOM 26 OP2 A B2327 66.615 109.551 101.592 1.00 42.54 O
ATOM 27 O5' A B2327 68.878 110.548 101.244 1.00 43.98 O
TER
ATOM 2 P C A2377 56.305 116.192 92.771 1.00 38.61 P
ATOM 3 OP1 C A2377 55.647 117.053 91.756 1.00 39.13 O
ATOM 4 OP2 C A2377 56.033 114.735 92.783 1.00 37.13 O
ATOM 5 O5' C A2377 57.885 116.377 92.659 1.00 36.66 O
ATOM 6 C5' C A2377 58.491 117.687 92.592 1.00 33.47 C
ATOM 7 C4' C A2377 59.938 117.567 92.176 1.00 34.03 C
ATOM 8 O4' C A2377 60.524 116.446 92.858 1.00 35.24 O
ATOM 9 C3' C A2377 60.195 117.217 90.714 1.00 34.86 C
ATOM 10 O3' C A2377 60.399 118.424 89.984 1.00 37.80 O
ATOM 11 C2' C A2377 61.503 116.405 90.734 1.00 34.16 C
ATOM 12 O2' C A2377 62.589 117.104 90.160 1.00 34.53 O
ATOM 13 C1' C A2377 61.747 116.182 92.231 1.00 33.16 C
ATOM 14 N1 C A2377 62.215 114.839 92.625 1.00 31.59 N
ATOM 15 C2 C A2377 63.373 114.741 93.405 1.00 29.49 C
ATOM 16 O2 C A2377 63.944 115.775 93.763 1.00 28.30 O
ATOM 17 N3 C A2377 63.839 113.525 93.747 1.00 30.18 N
ATOM 18 C4 C A2377 63.202 112.429 93.342 1.00 31.53 C
ATOM 19 N4 C A2377 63.727 111.251 93.673 1.00 31.86 N
ATOM 20 C5 C A2377 62.005 112.494 92.568 1.00 31.91 C
ATOM 21 C6 C A2377 61.551 113.708 92.235 1.00 31.19 C
ATOM 22 P G A2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 23 OP1 G A2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 24 OP2 G A2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 25 O5' G A2378 59.046 120.314 89.099 1.00 37.50 O
TER
ATOM 1 O3' U B2325 64.315 106.770 96.256 1.00 39.20 O
ATOM 2 P A B2326 64.064 106.783 97.841 1.00 40.39 P
ATOM 3 OP1 A B2326 63.858 105.369 98.261 1.00 38.92 O
ATOM 4 OP2 A B2326 63.032 107.795 98.160 1.00 40.49 O
ATOM 5 O5' A B2326 65.453 107.298 98.426 1.00 40.28 O
ATOM 6 C5' A B2326 66.592 106.425 98.490 1.00 40.01 C
ATOM 7 C4' A B2326 67.869 107.207 98.315 1.00 40.84 C
ATOM 8 O4' A B2326 67.965 107.716 96.959 1.00 41.51 O
ATOM 9 C3' A B2326 68.034 108.454 99.162 1.00 41.79 C
ATOM 10 O3' A B2326 68.407 108.173 100.499 1.00 41.97 O
ATOM 11 C2' A B2326 69.130 109.187 98.405 1.00 42.06 C
ATOM 12 O2' A B2326 70.412 108.623 98.615 1.00 43.85 O
ATOM 13 C1' A B2326 68.697 108.934 96.961 1.00 40.38 C
ATOM 14 N9 A B2326 67.833 110.010 96.476 1.00 38.85 N
ATOM 15 C8 A B2326 66.493 109.984 96.177 1.00 38.77 C
ATOM 16 N7 A B2326 66.017 111.139 95.775 1.00 38.14 N
ATOM 17 C5 A B2326 67.120 111.982 95.808 1.00 39.27 C
ATOM 18 C6 A B2326 67.286 113.345 95.498 1.00 38.54 C
ATOM 19 N6 A B2326 66.305 114.137 95.067 1.00 36.80 N
ATOM 20 N1 A B2326 68.519 113.875 95.647 1.00 39.32 N
ATOM 21 C2 A B2326 69.510 113.088 96.072 1.00 37.95 C
ATOM 22 N3 A B2326 69.483 111.799 96.389 1.00 39.69 N
ATOM 23 C4 A B2326 68.244 111.298 96.236 1.00 40.14 C
ATOM 24 P A B2327 68.063 109.235 101.656 1.00 45.41 P
ATOM 25 OP1 A B2327 68.641 108.676 102.915 1.00 46.08 O
ATOM 26 OP2 A B2327 66.615 109.551 101.592 1.00 42.54 O
ATOM 27 O5' A B2327 68.878 110.548 101.244 1.00 43.98 O
TER
Atoms:
C2: (63.373,114.741,93.405)
OP1: (55.647,117.053,91.756)
OP2: (56.033,114.735,92.783)
C4: (63.202,112.429,93.342)
O5': (57.885,116.377,92.659)
C3': (60.195,117.217,90.714)
C1': (61.747,116.182,92.231)
O4': (60.524,116.446,92.858)
C5': (58.491,117.687,92.592)
P: (56.305,116.192,92.771)
O2: (63.944,115.775,93.763)
C4': (59.938,117.567,92.176)
C2': (61.503,116.405,90.734)
O2': (62.589,117.104,90.160)
N1: (62.215,114.839,92.625)
N3: (63.839,113.525,93.747)
N4: (63.727,111.251,93.673)
C6: (61.551,113.708,92.235)
C5: (62.005,112.494,92.568)
O3': (60.399,118.424,89.984)
OP1: (55.647,117.053,91.756)
OP2: (56.033,114.735,92.783)
C4: (63.202,112.429,93.342)
O5': (57.885,116.377,92.659)
C3': (60.195,117.217,90.714)
C1': (61.747,116.182,92.231)
O4': (60.524,116.446,92.858)
C5': (58.491,117.687,92.592)
P: (56.305,116.192,92.771)
O2: (63.944,115.775,93.763)
C4': (59.938,117.567,92.176)
C2': (61.503,116.405,90.734)
O2': (62.589,117.104,90.160)
N1: (62.215,114.839,92.625)
N3: (63.839,113.525,93.747)
N4: (63.727,111.251,93.673)
C6: (61.551,113.708,92.235)
C5: (62.005,112.494,92.568)
O3': (60.399,118.424,89.984)
OP1: (63.858,105.369,98.261)
OP2: (63.032,107.795,98.160)
C3': (68.034,108.454,99.162)
C1': (68.697,108.934,96.961)
C5': (66.592,106.425,98.490)
O4': (67.965,107.716,96.959)
C8: (66.493,109.984,96.177)
O2': (70.412,108.623,98.615)
C6: (67.286,113.345,95.498)
C5: (67.120,111.982,95.808)
C4: (68.244,111.298,96.236)
P: (64.064,106.783,97.841)
C4': (67.869,107.207,98.315)
C2': (69.130,109.187,98.405)
C2: (69.510,113.088,96.072)
N1: (68.519,113.875,95.647)
N3: (69.483,111.799,96.389)
N6: (66.305,114.137,95.067)
N7: (66.017,111.139,95.775)
N9: (67.833,110.010,96.476)
O5': (65.453,107.298,98.426)
O3': (68.407,108.173,100.499)
OP2: (63.032,107.795,98.160)
C3': (68.034,108.454,99.162)
C1': (68.697,108.934,96.961)
C5': (66.592,106.425,98.490)
O4': (67.965,107.716,96.959)
C8: (66.493,109.984,96.177)
O2': (70.412,108.623,98.615)
C6: (67.286,113.345,95.498)
C5: (67.120,111.982,95.808)
C4: (68.244,111.298,96.236)
P: (64.064,106.783,97.841)
C4': (67.869,107.207,98.315)
C2': (69.130,109.187,98.405)
C2: (69.510,113.088,96.072)
N1: (68.519,113.875,95.647)
N3: (69.483,111.799,96.389)
N6: (66.305,114.137,95.067)
N7: (66.017,111.139,95.775)
N9: (67.833,110.010,96.476)
O5': (65.453,107.298,98.426)
O3': (68.407,108.173,100.499)
Image (generated by PyMOL):