Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0883:0753
Extra
PDB:
ATOM 1 O3' A A 882 62.114 112.646 62.247 1.00 25.00 O
ATOM 2 P C A 883 60.867 111.894 62.931 1.00 25.79 P
ATOM 3 OP1 C A 883 60.393 110.922 61.910 1.00 27.06 O
ATOM 4 OP2 C A 883 59.918 112.908 63.475 1.00 20.19 O
ATOM 5 O5' C A 883 61.530 111.058 64.119 1.00 22.91 O
ATOM 6 C5' C A 883 62.247 109.828 63.858 1.00 24.46 C
ATOM 7 C4' C A 883 63.027 109.391 65.086 1.00 27.40 C
ATOM 8 O4' C A 883 63.987 110.425 65.432 1.00 29.51 O
ATOM 9 C3' C A 883 62.244 109.156 66.374 1.00 25.77 C
ATOM 10 O3' C A 883 61.683 107.841 66.420 1.00 24.59 O
ATOM 11 C2' C A 883 63.320 109.336 67.434 1.00 25.56 C
ATOM 12 O2' C A 883 64.146 108.197 67.534 1.00 25.21 O
ATOM 13 C1' C A 883 64.143 110.483 66.840 1.00 26.92 C
ATOM 14 N1 C A 883 63.722 111.823 67.308 1.00 27.11 N
ATOM 15 C2 C A 883 64.290 112.335 68.479 1.00 27.33 C
ATOM 16 O2 C A 883 65.160 111.672 69.068 1.00 29.81 O
ATOM 17 N3 C A 883 63.877 113.537 68.942 1.00 25.26 N
ATOM 18 C4 C A 883 62.942 114.220 68.285 1.00 23.43 C
ATOM 19 N4 C A 883 62.543 115.376 68.802 1.00 21.79 N
ATOM 20 C5 C A 883 62.368 113.740 67.077 1.00 23.76 C
ATOM 21 C6 C A 883 62.784 112.550 66.626 1.00 26.05 C
ATOM 22 P A A 884 60.392 107.547 67.334 1.00 22.11 P
ATOM 23 OP1 A A 884 60.060 106.132 67.140 1.00 23.94 O
ATOM 24 OP2 A A 884 59.369 108.573 67.076 1.00 22.75 O
ATOM 25 O5' A A 884 60.914 107.728 68.822 1.00 21.76 O
TER
ATOM 1 O3' G B 752 58.591 121.086 73.463 1.00 28.06 O
ATOM 2 P A B 753 60.068 121.321 72.876 1.00 28.70 P
ATOM 3 OP1 A B 753 60.541 122.593 73.464 1.00 29.09 O
ATOM 4 OP2 A B 753 60.061 121.155 71.401 1.00 28.51 O
ATOM 5 O5' A B 753 60.938 120.152 73.510 1.00 27.29 O
ATOM 6 C5' A B 753 61.253 120.157 74.908 1.00 24.76 C
ATOM 7 C4' A B 753 62.721 119.908 75.106 1.00 23.35 C
ATOM 8 O4' A B 753 63.027 118.531 74.764 1.00 23.14 O
ATOM 9 C3' A B 753 63.652 120.768 74.257 1.00 23.19 C
ATOM 10 O3' A B 753 64.828 121.059 74.995 1.00 25.81 O
ATOM 11 C2' A B 753 64.046 119.824 73.132 1.00 23.03 C
ATOM 12 O2' A B 753 65.301 120.172 72.592 1.00 22.12 O
ATOM 13 C1' A B 753 64.133 118.507 73.894 1.00 23.15 C
ATOM 14 N9 A B 753 64.087 117.276 73.107 1.00 22.28 N
ATOM 15 C8 A B 753 63.555 117.064 71.864 1.00 22.65 C
ATOM 16 N7 A B 753 63.676 115.831 71.441 1.00 23.36 N
ATOM 17 C5 A B 753 64.330 115.186 72.478 1.00 23.70 C
ATOM 18 C6 A B 753 64.742 113.853 72.655 1.00 24.87 C
ATOM 19 N6 A B 753 64.543 112.892 71.753 1.00 26.24 N
ATOM 20 N1 A B 753 65.370 113.535 73.806 1.00 24.67 N
ATOM 21 C2 A B 753 65.564 114.498 74.711 1.00 26.03 C
ATOM 22 N3 A B 753 65.218 115.783 74.662 1.00 25.55 N
ATOM 23 C4 A B 753 64.595 116.065 73.506 1.00 23.26 C
ATOM 24 P A B 754 65.323 122.577 75.141 1.00 26.34 P
ATOM 25 OP1 A B 754 64.807 123.121 76.423 1.00 26.31 O
ATOM 26 OP2 A B 754 65.023 123.282 73.870 1.00 27.93 O
ATOM 27 O5' A B 754 66.892 122.431 75.286 1.00 22.36 O
TER
ATOM 2 P C A 883 60.867 111.894 62.931 1.00 25.79 P
ATOM 3 OP1 C A 883 60.393 110.922 61.910 1.00 27.06 O
ATOM 4 OP2 C A 883 59.918 112.908 63.475 1.00 20.19 O
ATOM 5 O5' C A 883 61.530 111.058 64.119 1.00 22.91 O
ATOM 6 C5' C A 883 62.247 109.828 63.858 1.00 24.46 C
ATOM 7 C4' C A 883 63.027 109.391 65.086 1.00 27.40 C
ATOM 8 O4' C A 883 63.987 110.425 65.432 1.00 29.51 O
ATOM 9 C3' C A 883 62.244 109.156 66.374 1.00 25.77 C
ATOM 10 O3' C A 883 61.683 107.841 66.420 1.00 24.59 O
ATOM 11 C2' C A 883 63.320 109.336 67.434 1.00 25.56 C
ATOM 12 O2' C A 883 64.146 108.197 67.534 1.00 25.21 O
ATOM 13 C1' C A 883 64.143 110.483 66.840 1.00 26.92 C
ATOM 14 N1 C A 883 63.722 111.823 67.308 1.00 27.11 N
ATOM 15 C2 C A 883 64.290 112.335 68.479 1.00 27.33 C
ATOM 16 O2 C A 883 65.160 111.672 69.068 1.00 29.81 O
ATOM 17 N3 C A 883 63.877 113.537 68.942 1.00 25.26 N
ATOM 18 C4 C A 883 62.942 114.220 68.285 1.00 23.43 C
ATOM 19 N4 C A 883 62.543 115.376 68.802 1.00 21.79 N
ATOM 20 C5 C A 883 62.368 113.740 67.077 1.00 23.76 C
ATOM 21 C6 C A 883 62.784 112.550 66.626 1.00 26.05 C
ATOM 22 P A A 884 60.392 107.547 67.334 1.00 22.11 P
ATOM 23 OP1 A A 884 60.060 106.132 67.140 1.00 23.94 O
ATOM 24 OP2 A A 884 59.369 108.573 67.076 1.00 22.75 O
ATOM 25 O5' A A 884 60.914 107.728 68.822 1.00 21.76 O
TER
ATOM 1 O3' G B 752 58.591 121.086 73.463 1.00 28.06 O
ATOM 2 P A B 753 60.068 121.321 72.876 1.00 28.70 P
ATOM 3 OP1 A B 753 60.541 122.593 73.464 1.00 29.09 O
ATOM 4 OP2 A B 753 60.061 121.155 71.401 1.00 28.51 O
ATOM 5 O5' A B 753 60.938 120.152 73.510 1.00 27.29 O
ATOM 6 C5' A B 753 61.253 120.157 74.908 1.00 24.76 C
ATOM 7 C4' A B 753 62.721 119.908 75.106 1.00 23.35 C
ATOM 8 O4' A B 753 63.027 118.531 74.764 1.00 23.14 O
ATOM 9 C3' A B 753 63.652 120.768 74.257 1.00 23.19 C
ATOM 10 O3' A B 753 64.828 121.059 74.995 1.00 25.81 O
ATOM 11 C2' A B 753 64.046 119.824 73.132 1.00 23.03 C
ATOM 12 O2' A B 753 65.301 120.172 72.592 1.00 22.12 O
ATOM 13 C1' A B 753 64.133 118.507 73.894 1.00 23.15 C
ATOM 14 N9 A B 753 64.087 117.276 73.107 1.00 22.28 N
ATOM 15 C8 A B 753 63.555 117.064 71.864 1.00 22.65 C
ATOM 16 N7 A B 753 63.676 115.831 71.441 1.00 23.36 N
ATOM 17 C5 A B 753 64.330 115.186 72.478 1.00 23.70 C
ATOM 18 C6 A B 753 64.742 113.853 72.655 1.00 24.87 C
ATOM 19 N6 A B 753 64.543 112.892 71.753 1.00 26.24 N
ATOM 20 N1 A B 753 65.370 113.535 73.806 1.00 24.67 N
ATOM 21 C2 A B 753 65.564 114.498 74.711 1.00 26.03 C
ATOM 22 N3 A B 753 65.218 115.783 74.662 1.00 25.55 N
ATOM 23 C4 A B 753 64.595 116.065 73.506 1.00 23.26 C
ATOM 24 P A B 754 65.323 122.577 75.141 1.00 26.34 P
ATOM 25 OP1 A B 754 64.807 123.121 76.423 1.00 26.31 O
ATOM 26 OP2 A B 754 65.023 123.282 73.870 1.00 27.93 O
ATOM 27 O5' A B 754 66.892 122.431 75.286 1.00 22.36 O
TER
Atoms:
C2: (64.290,112.335,68.479)
OP1: (60.393,110.922,61.910)
OP2: (59.918,112.908,63.475)
C4: (62.942,114.220,68.285)
O5': (61.530,111.058,64.119)
C3': (62.244,109.156,66.374)
C1': (64.143,110.483,66.840)
O4': (63.987,110.425,65.432)
C5': (62.247,109.828,63.858)
P: (60.867,111.894,62.931)
O2: (65.160,111.672,69.068)
C4': (63.027,109.391,65.086)
C2': (63.320,109.336,67.434)
O2': (64.146,108.197,67.534)
N1: (63.722,111.823,67.308)
N3: (63.877,113.537,68.942)
N4: (62.543,115.376,68.802)
C6: (62.784,112.550,66.626)
C5: (62.368,113.740,67.077)
O3': (61.683,107.841,66.420)
OP1: (60.393,110.922,61.910)
OP2: (59.918,112.908,63.475)
C4: (62.942,114.220,68.285)
O5': (61.530,111.058,64.119)
C3': (62.244,109.156,66.374)
C1': (64.143,110.483,66.840)
O4': (63.987,110.425,65.432)
C5': (62.247,109.828,63.858)
P: (60.867,111.894,62.931)
O2: (65.160,111.672,69.068)
C4': (63.027,109.391,65.086)
C2': (63.320,109.336,67.434)
O2': (64.146,108.197,67.534)
N1: (63.722,111.823,67.308)
N3: (63.877,113.537,68.942)
N4: (62.543,115.376,68.802)
C6: (62.784,112.550,66.626)
C5: (62.368,113.740,67.077)
O3': (61.683,107.841,66.420)
OP1: (60.541,122.593,73.464)
OP2: (60.061,121.155,71.401)
C3': (63.652,120.768,74.257)
C1': (64.133,118.507,73.894)
C5': (61.253,120.157,74.908)
O4': (63.027,118.531,74.764)
C8: (63.555,117.064,71.864)
O2': (65.301,120.172,72.592)
C6: (64.742,113.853,72.655)
C5: (64.330,115.186,72.478)
C4: (64.595,116.065,73.506)
P: (60.068,121.321,72.876)
C4': (62.721,119.908,75.106)
C2': (64.046,119.824,73.132)
C2: (65.564,114.498,74.711)
N1: (65.370,113.535,73.806)
N3: (65.218,115.783,74.662)
N6: (64.543,112.892,71.753)
N7: (63.676,115.831,71.441)
N9: (64.087,117.276,73.107)
O5': (60.938,120.152,73.510)
O3': (64.828,121.059,74.995)
OP2: (60.061,121.155,71.401)
C3': (63.652,120.768,74.257)
C1': (64.133,118.507,73.894)
C5': (61.253,120.157,74.908)
O4': (63.027,118.531,74.764)
C8: (63.555,117.064,71.864)
O2': (65.301,120.172,72.592)
C6: (64.742,113.853,72.655)
C5: (64.330,115.186,72.478)
C4: (64.595,116.065,73.506)
P: (60.068,121.321,72.876)
C4': (62.721,119.908,75.106)
C2': (64.046,119.824,73.132)
C2: (65.564,114.498,74.711)
N1: (65.370,113.535,73.806)
N3: (65.218,115.783,74.662)
N6: (64.543,112.892,71.753)
N7: (63.676,115.831,71.441)
N9: (64.087,117.276,73.107)
O5': (60.938,120.152,73.510)
O3': (64.828,121.059,74.995)
Image (generated by PyMOL):