Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61425:61269
Extra
PDB:
ATOM 1 O3' U A1424 242.345 -27.681 275.397 1.00 70.36 O
ATOM 2 P C A1425 241.093 -26.844 275.939 1.00 73.83 P
ATOM 3 OP1 C A1425 240.343 -27.736 276.852 1.00 74.08 O
ATOM 4 OP2 C A1425 240.390 -26.286 274.756 1.00 73.62 O
ATOM 5 O5' C A1425 241.779 -25.671 276.769 1.00 74.10 O
ATOM 6 C5' C A1425 243.031 -25.870 277.412 1.00 74.18 C
ATOM 7 C4' C A1425 243.118 -25.140 278.728 1.00 74.62 C
ATOM 8 O4' C A1425 243.654 -23.815 278.493 1.00 74.65 O
ATOM 9 C3' C A1425 241.792 -24.973 279.486 1.00 74.95 C
ATOM 10 O3' C A1425 241.940 -25.370 280.847 1.00 75.33 O
ATOM 11 C2' C A1425 241.501 -23.471 279.423 1.00 75.11 C
ATOM 12 O2' C A1425 240.907 -22.922 280.593 1.00 75.60 O
ATOM 13 C1' C A1425 242.866 -22.836 279.141 1.00 74.99 C
ATOM 14 N1 C A1425 242.739 -21.678 278.248 1.00 74.85 N
ATOM 15 C2 C A1425 242.939 -20.373 278.675 1.00 75.12 C
ATOM 16 O2 C A1425 243.340 -20.142 279.824 1.00 75.49 O
ATOM 17 N3 C A1425 242.705 -19.388 277.796 1.00 74.97 N
ATOM 18 C4 C A1425 242.265 -19.673 276.573 1.00 74.58 C
ATOM 19 N4 C A1425 242.036 -18.683 275.711 1.00 74.45 N
ATOM 20 C5 C A1425 242.030 -20.995 276.143 1.00 74.33 C
ATOM 21 C6 C A1425 242.256 -21.957 277.016 1.00 74.48 C
ATOM 22 P U A1426 240.782 -26.223 281.578 1.00 84.96 P
ATOM 23 OP1 U A1426 239.472 -25.682 281.130 1.00 85.01 O
ATOM 24 OP2 U A1426 241.102 -26.220 283.033 1.00 85.40 O
ATOM 25 O5' U A1426 240.980 -27.685 280.973 1.00 84.60 O
TER
ATOM 1 O3' C B1268 238.918 -15.448 271.880 1.00 93.43 O
ATOM 2 P A B1269 240.034 -15.538 273.024 1.00 83.75 P
ATOM 3 OP1 A B1269 240.521 -16.929 273.045 1.00 83.56 O
ATOM 4 OP2 A B1269 239.447 -14.970 274.257 1.00 84.25 O
ATOM 5 O5' A B1269 241.179 -14.589 272.492 1.00 83.60 O
ATOM 6 C5' A B1269 240.913 -13.238 272.200 1.00 83.69 C
ATOM 7 C4' A B1269 241.881 -12.338 272.901 1.00 83.94 C
ATOM 8 O4' A B1269 241.584 -12.311 274.327 1.00 84.41 O
ATOM 9 C3' A B1269 243.320 -12.777 272.857 1.00 83.78 C
ATOM 10 O3' A B1269 243.952 -12.501 271.620 1.00 83.42 O
ATOM 11 C2' A B1269 243.898 -12.026 274.040 1.00 84.22 C
ATOM 12 O2' A B1269 243.952 -10.640 273.747 1.00 84.31 O
ATOM 13 C1' A B1269 242.785 -12.232 275.059 1.00 84.58 C
ATOM 14 N9 A B1269 242.930 -13.484 275.826 1.00 84.65 N
ATOM 15 C8 A B1269 242.051 -14.544 275.771 1.00 84.55 C
ATOM 16 N7 A B1269 242.352 -15.550 276.570 1.00 84.66 N
ATOM 17 C5 A B1269 243.513 -15.132 277.217 1.00 84.85 C
ATOM 18 C6 A B1269 244.343 -15.740 278.189 1.00 85.05 C
ATOM 19 N6 A B1269 244.152 -16.941 278.713 1.00 85.08 N
ATOM 20 N1 A B1269 245.418 -15.072 278.633 1.00 85.26 N
ATOM 21 C2 A B1269 245.630 -13.859 278.110 1.00 85.24 C
ATOM 22 N3 A B1269 244.933 -13.172 277.190 1.00 85.05 N
ATOM 23 C4 A B1269 243.866 -13.859 276.772 1.00 84.86 C
ATOM 24 P U B1270 245.130 -13.473 271.093 1.00 86.28 P
ATOM 25 OP1 U B1270 245.898 -12.726 270.047 1.00 86.06 O
ATOM 26 OP2 U B1270 244.490 -14.759 270.729 1.00 86.06 O
ATOM 27 O5' U B1270 246.030 -13.669 272.393 1.00 86.62 O
TER
ATOM 2 P C A1425 241.093 -26.844 275.939 1.00 73.83 P
ATOM 3 OP1 C A1425 240.343 -27.736 276.852 1.00 74.08 O
ATOM 4 OP2 C A1425 240.390 -26.286 274.756 1.00 73.62 O
ATOM 5 O5' C A1425 241.779 -25.671 276.769 1.00 74.10 O
ATOM 6 C5' C A1425 243.031 -25.870 277.412 1.00 74.18 C
ATOM 7 C4' C A1425 243.118 -25.140 278.728 1.00 74.62 C
ATOM 8 O4' C A1425 243.654 -23.815 278.493 1.00 74.65 O
ATOM 9 C3' C A1425 241.792 -24.973 279.486 1.00 74.95 C
ATOM 10 O3' C A1425 241.940 -25.370 280.847 1.00 75.33 O
ATOM 11 C2' C A1425 241.501 -23.471 279.423 1.00 75.11 C
ATOM 12 O2' C A1425 240.907 -22.922 280.593 1.00 75.60 O
ATOM 13 C1' C A1425 242.866 -22.836 279.141 1.00 74.99 C
ATOM 14 N1 C A1425 242.739 -21.678 278.248 1.00 74.85 N
ATOM 15 C2 C A1425 242.939 -20.373 278.675 1.00 75.12 C
ATOM 16 O2 C A1425 243.340 -20.142 279.824 1.00 75.49 O
ATOM 17 N3 C A1425 242.705 -19.388 277.796 1.00 74.97 N
ATOM 18 C4 C A1425 242.265 -19.673 276.573 1.00 74.58 C
ATOM 19 N4 C A1425 242.036 -18.683 275.711 1.00 74.45 N
ATOM 20 C5 C A1425 242.030 -20.995 276.143 1.00 74.33 C
ATOM 21 C6 C A1425 242.256 -21.957 277.016 1.00 74.48 C
ATOM 22 P U A1426 240.782 -26.223 281.578 1.00 84.96 P
ATOM 23 OP1 U A1426 239.472 -25.682 281.130 1.00 85.01 O
ATOM 24 OP2 U A1426 241.102 -26.220 283.033 1.00 85.40 O
ATOM 25 O5' U A1426 240.980 -27.685 280.973 1.00 84.60 O
TER
ATOM 1 O3' C B1268 238.918 -15.448 271.880 1.00 93.43 O
ATOM 2 P A B1269 240.034 -15.538 273.024 1.00 83.75 P
ATOM 3 OP1 A B1269 240.521 -16.929 273.045 1.00 83.56 O
ATOM 4 OP2 A B1269 239.447 -14.970 274.257 1.00 84.25 O
ATOM 5 O5' A B1269 241.179 -14.589 272.492 1.00 83.60 O
ATOM 6 C5' A B1269 240.913 -13.238 272.200 1.00 83.69 C
ATOM 7 C4' A B1269 241.881 -12.338 272.901 1.00 83.94 C
ATOM 8 O4' A B1269 241.584 -12.311 274.327 1.00 84.41 O
ATOM 9 C3' A B1269 243.320 -12.777 272.857 1.00 83.78 C
ATOM 10 O3' A B1269 243.952 -12.501 271.620 1.00 83.42 O
ATOM 11 C2' A B1269 243.898 -12.026 274.040 1.00 84.22 C
ATOM 12 O2' A B1269 243.952 -10.640 273.747 1.00 84.31 O
ATOM 13 C1' A B1269 242.785 -12.232 275.059 1.00 84.58 C
ATOM 14 N9 A B1269 242.930 -13.484 275.826 1.00 84.65 N
ATOM 15 C8 A B1269 242.051 -14.544 275.771 1.00 84.55 C
ATOM 16 N7 A B1269 242.352 -15.550 276.570 1.00 84.66 N
ATOM 17 C5 A B1269 243.513 -15.132 277.217 1.00 84.85 C
ATOM 18 C6 A B1269 244.343 -15.740 278.189 1.00 85.05 C
ATOM 19 N6 A B1269 244.152 -16.941 278.713 1.00 85.08 N
ATOM 20 N1 A B1269 245.418 -15.072 278.633 1.00 85.26 N
ATOM 21 C2 A B1269 245.630 -13.859 278.110 1.00 85.24 C
ATOM 22 N3 A B1269 244.933 -13.172 277.190 1.00 85.05 N
ATOM 23 C4 A B1269 243.866 -13.859 276.772 1.00 84.86 C
ATOM 24 P U B1270 245.130 -13.473 271.093 1.00 86.28 P
ATOM 25 OP1 U B1270 245.898 -12.726 270.047 1.00 86.06 O
ATOM 26 OP2 U B1270 244.490 -14.759 270.729 1.00 86.06 O
ATOM 27 O5' U B1270 246.030 -13.669 272.393 1.00 86.62 O
TER
Atoms:
C2: (242.939,-20.373,278.675)
OP1: (240.343,-27.736,276.852)
OP2: (240.390,-26.286,274.756)
C4: (242.265,-19.673,276.573)
O5': (241.779,-25.671,276.769)
C3': (241.792,-24.973,279.486)
C1': (242.866,-22.836,279.141)
O4': (243.654,-23.815,278.493)
C5': (243.031,-25.870,277.412)
P: (241.093,-26.844,275.939)
O2: (243.340,-20.142,279.824)
C4': (243.118,-25.140,278.728)
C2': (241.501,-23.471,279.423)
O2': (240.907,-22.922,280.593)
N1: (242.739,-21.678,278.248)
N3: (242.705,-19.388,277.796)
N4: (242.036,-18.683,275.711)
C6: (242.256,-21.957,277.016)
C5: (242.030,-20.995,276.143)
O3': (241.940,-25.370,280.847)
OP1: (240.343,-27.736,276.852)
OP2: (240.390,-26.286,274.756)
C4: (242.265,-19.673,276.573)
O5': (241.779,-25.671,276.769)
C3': (241.792,-24.973,279.486)
C1': (242.866,-22.836,279.141)
O4': (243.654,-23.815,278.493)
C5': (243.031,-25.870,277.412)
P: (241.093,-26.844,275.939)
O2: (243.340,-20.142,279.824)
C4': (243.118,-25.140,278.728)
C2': (241.501,-23.471,279.423)
O2': (240.907,-22.922,280.593)
N1: (242.739,-21.678,278.248)
N3: (242.705,-19.388,277.796)
N4: (242.036,-18.683,275.711)
C6: (242.256,-21.957,277.016)
C5: (242.030,-20.995,276.143)
O3': (241.940,-25.370,280.847)
OP1: (240.521,-16.929,273.045)
OP2: (239.447,-14.970,274.257)
C3': (243.320,-12.777,272.857)
C1': (242.785,-12.232,275.059)
C5': (240.913,-13.238,272.200)
O4': (241.584,-12.311,274.327)
C8: (242.051,-14.544,275.771)
O2': (243.952,-10.640,273.747)
C6: (244.343,-15.740,278.189)
C5: (243.513,-15.132,277.217)
C4: (243.866,-13.859,276.772)
P: (240.034,-15.538,273.024)
C4': (241.881,-12.338,272.901)
C2': (243.898,-12.026,274.040)
C2: (245.630,-13.859,278.110)
N1: (245.418,-15.072,278.633)
N3: (244.933,-13.172,277.190)
N6: (244.152,-16.941,278.713)
N7: (242.352,-15.550,276.570)
N9: (242.930,-13.484,275.826)
O5': (241.179,-14.589,272.492)
O3': (243.952,-12.501,271.620)
OP2: (239.447,-14.970,274.257)
C3': (243.320,-12.777,272.857)
C1': (242.785,-12.232,275.059)
C5': (240.913,-13.238,272.200)
O4': (241.584,-12.311,274.327)
C8: (242.051,-14.544,275.771)
O2': (243.952,-10.640,273.747)
C6: (244.343,-15.740,278.189)
C5: (243.513,-15.132,277.217)
C4: (243.866,-13.859,276.772)
P: (240.034,-15.538,273.024)
C4': (241.881,-12.338,272.901)
C2': (243.898,-12.026,274.040)
C2: (245.630,-13.859,278.110)
N1: (245.418,-15.072,278.633)
N3: (244.933,-13.172,277.190)
N6: (244.152,-16.941,278.713)
N7: (242.352,-15.550,276.570)
N9: (242.930,-13.484,275.826)
O5': (241.179,-14.589,272.492)
O3': (243.952,-12.501,271.620)
Image (generated by PyMOL):