Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A458:A442
Extra
PDB:
ATOM 1 O3' A A 457 -6.624 1.641 100.936 1.00 74.30 O
ATOM 2 P C A 458 -7.850 2.641 100.657 1.00 74.09 P
ATOM 3 OP1 C A 458 -9.108 1.923 100.983 1.00 48.39 O
ATOM 4 OP2 C A 458 -7.678 3.231 99.302 1.00 47.95 O
ATOM 5 O5' C A 458 -7.631 3.779 101.753 1.00 68.88 O
ATOM 6 C5' C A 458 -7.470 3.424 103.143 1.00 65.45 C
ATOM 7 C4' C A 458 -7.187 4.646 103.987 1.00 62.67 C
ATOM 8 O4' C A 458 -5.875 5.191 103.689 1.00 61.93 O
ATOM 9 C3' C A 458 -8.135 5.811 103.811 1.00 60.58 C
ATOM 10 O3' C A 458 -9.317 5.628 104.566 1.00 58.11 O
ATOM 11 C2' C A 458 -7.307 6.988 104.309 1.00 60.64 C
ATOM 12 O2' C A 458 -7.339 7.114 105.715 1.00 60.23 O
ATOM 13 C1' C A 458 -5.895 6.594 103.862 1.00 60.82 C
ATOM 14 N1 C A 458 -5.478 7.236 102.599 1.00 95.27 N
ATOM 15 C2 C A 458 -5.251 8.625 102.585 1.00 95.07 C
ATOM 16 O2 C A 458 -5.397 9.275 103.638 1.00 94.64 O
ATOM 17 N3 C A 458 -4.881 9.223 101.431 1.00 94.76 N
ATOM 18 C4 C A 458 -4.731 8.499 100.324 1.00 94.50 C
ATOM 19 N4 C A 458 -4.372 9.134 99.210 1.00 94.16 N
ATOM 20 C5 C A 458 -4.946 7.091 100.310 1.00 94.72 C
ATOM 21 C6 C A 458 -5.315 6.506 101.456 1.00 94.96 C
ATOM 22 P U A 459 -10.697 6.239 104.020 1.00 80.61 P
ATOM 23 OP1 U A 459 -11.760 5.867 104.998 1.00 57.49 O
ATOM 24 OP2 U A 459 -10.849 5.865 102.582 1.00 56.00 O
ATOM 25 O5' U A 459 -10.463 7.816 104.101 1.00 34.38 O
TER
ATOM 1 O3' A B 441 -1.487 12.361 93.519 1.00 12.87 O
ATOM 2 P A B 442 -0.272 11.317 93.400 1.00 36.99 P
ATOM 3 OP1 A B 442 0.144 11.271 91.967 1.00 35.12 O
ATOM 4 OP2 A B 442 -0.648 10.048 94.099 1.00 35.02 O
ATOM 5 O5' A B 442 0.893 12.054 94.202 1.00 30.74 O
ATOM 6 C5' A B 442 1.207 11.707 95.566 1.00 29.02 C
ATOM 7 C4' A B 442 1.269 12.948 96.430 1.00 27.56 C
ATOM 8 O4' A B 442 -0.071 13.376 96.785 1.00 25.42 O
ATOM 9 C3' A B 442 1.975 12.752 97.765 1.00 26.68 C
ATOM 10 O3' A B 442 3.377 12.925 97.570 1.00 27.70 O
ATOM 11 C2' A B 442 1.365 13.838 98.649 1.00 25.74 C
ATOM 12 O2' A B 442 1.999 15.096 98.516 1.00 24.97 O
ATOM 13 C1' A B 442 -0.051 13.950 98.079 1.00 25.82 C
ATOM 14 N9 A B 442 -1.116 13.352 98.878 1.00 27.40 N
ATOM 15 C8 A B 442 -1.902 12.280 98.568 1.00 27.65 C
ATOM 16 N7 A B 442 -2.826 12.024 99.461 1.00 27.95 N
ATOM 17 C5 A B 442 -2.621 12.983 100.435 1.00 28.31 C
ATOM 18 C6 A B 442 -3.276 13.251 101.647 1.00 28.35 C
ATOM 19 N6 A B 442 -4.326 12.559 102.094 1.00 27.49 N
ATOM 20 N1 A B 442 -2.814 14.272 102.395 1.00 29.29 N
ATOM 21 C2 A B 442 -1.770 14.975 101.939 1.00 30.18 C
ATOM 22 N3 A B 442 -1.077 14.823 100.812 1.00 29.63 N
ATOM 23 C4 A B 442 -1.559 13.797 100.098 1.00 28.77 C
ATOM 24 P C B 443 4.414 11.928 98.278 1.00 64.12 P
ATOM 25 OP1 C B 443 5.786 12.320 97.825 1.00 43.01 O
ATOM 26 OP2 C B 443 3.952 10.537 98.090 1.00 46.54 O
ATOM 27 O5' C B 443 4.257 12.281 99.820 1.00 43.80 O
TER
ATOM 2 P C A 458 -7.850 2.641 100.657 1.00 74.09 P
ATOM 3 OP1 C A 458 -9.108 1.923 100.983 1.00 48.39 O
ATOM 4 OP2 C A 458 -7.678 3.231 99.302 1.00 47.95 O
ATOM 5 O5' C A 458 -7.631 3.779 101.753 1.00 68.88 O
ATOM 6 C5' C A 458 -7.470 3.424 103.143 1.00 65.45 C
ATOM 7 C4' C A 458 -7.187 4.646 103.987 1.00 62.67 C
ATOM 8 O4' C A 458 -5.875 5.191 103.689 1.00 61.93 O
ATOM 9 C3' C A 458 -8.135 5.811 103.811 1.00 60.58 C
ATOM 10 O3' C A 458 -9.317 5.628 104.566 1.00 58.11 O
ATOM 11 C2' C A 458 -7.307 6.988 104.309 1.00 60.64 C
ATOM 12 O2' C A 458 -7.339 7.114 105.715 1.00 60.23 O
ATOM 13 C1' C A 458 -5.895 6.594 103.862 1.00 60.82 C
ATOM 14 N1 C A 458 -5.478 7.236 102.599 1.00 95.27 N
ATOM 15 C2 C A 458 -5.251 8.625 102.585 1.00 95.07 C
ATOM 16 O2 C A 458 -5.397 9.275 103.638 1.00 94.64 O
ATOM 17 N3 C A 458 -4.881 9.223 101.431 1.00 94.76 N
ATOM 18 C4 C A 458 -4.731 8.499 100.324 1.00 94.50 C
ATOM 19 N4 C A 458 -4.372 9.134 99.210 1.00 94.16 N
ATOM 20 C5 C A 458 -4.946 7.091 100.310 1.00 94.72 C
ATOM 21 C6 C A 458 -5.315 6.506 101.456 1.00 94.96 C
ATOM 22 P U A 459 -10.697 6.239 104.020 1.00 80.61 P
ATOM 23 OP1 U A 459 -11.760 5.867 104.998 1.00 57.49 O
ATOM 24 OP2 U A 459 -10.849 5.865 102.582 1.00 56.00 O
ATOM 25 O5' U A 459 -10.463 7.816 104.101 1.00 34.38 O
TER
ATOM 1 O3' A B 441 -1.487 12.361 93.519 1.00 12.87 O
ATOM 2 P A B 442 -0.272 11.317 93.400 1.00 36.99 P
ATOM 3 OP1 A B 442 0.144 11.271 91.967 1.00 35.12 O
ATOM 4 OP2 A B 442 -0.648 10.048 94.099 1.00 35.02 O
ATOM 5 O5' A B 442 0.893 12.054 94.202 1.00 30.74 O
ATOM 6 C5' A B 442 1.207 11.707 95.566 1.00 29.02 C
ATOM 7 C4' A B 442 1.269 12.948 96.430 1.00 27.56 C
ATOM 8 O4' A B 442 -0.071 13.376 96.785 1.00 25.42 O
ATOM 9 C3' A B 442 1.975 12.752 97.765 1.00 26.68 C
ATOM 10 O3' A B 442 3.377 12.925 97.570 1.00 27.70 O
ATOM 11 C2' A B 442 1.365 13.838 98.649 1.00 25.74 C
ATOM 12 O2' A B 442 1.999 15.096 98.516 1.00 24.97 O
ATOM 13 C1' A B 442 -0.051 13.950 98.079 1.00 25.82 C
ATOM 14 N9 A B 442 -1.116 13.352 98.878 1.00 27.40 N
ATOM 15 C8 A B 442 -1.902 12.280 98.568 1.00 27.65 C
ATOM 16 N7 A B 442 -2.826 12.024 99.461 1.00 27.95 N
ATOM 17 C5 A B 442 -2.621 12.983 100.435 1.00 28.31 C
ATOM 18 C6 A B 442 -3.276 13.251 101.647 1.00 28.35 C
ATOM 19 N6 A B 442 -4.326 12.559 102.094 1.00 27.49 N
ATOM 20 N1 A B 442 -2.814 14.272 102.395 1.00 29.29 N
ATOM 21 C2 A B 442 -1.770 14.975 101.939 1.00 30.18 C
ATOM 22 N3 A B 442 -1.077 14.823 100.812 1.00 29.63 N
ATOM 23 C4 A B 442 -1.559 13.797 100.098 1.00 28.77 C
ATOM 24 P C B 443 4.414 11.928 98.278 1.00 64.12 P
ATOM 25 OP1 C B 443 5.786 12.320 97.825 1.00 43.01 O
ATOM 26 OP2 C B 443 3.952 10.537 98.090 1.00 46.54 O
ATOM 27 O5' C B 443 4.257 12.281 99.820 1.00 43.80 O
TER
Atoms:
C2: (-5.251,8.625,102.585)
OP1: (-9.108,1.923,100.983)
OP2: (-7.678,3.231,99.302)
C4: (-4.731,8.499,100.324)
O5': (-7.631,3.779,101.753)
C3': (-8.135,5.811,103.811)
C1': (-5.895,6.594,103.862)
O4': (-5.875,5.191,103.689)
C5': (-7.470,3.424,103.143)
P: (-7.850,2.641,100.657)
O2: (-5.397,9.275,103.638)
C4': (-7.187,4.646,103.987)
C2': (-7.307,6.988,104.309)
O2': (-7.339,7.114,105.715)
N1: (-5.478,7.236,102.599)
N3: (-4.881,9.223,101.431)
N4: (-4.372,9.134,99.210)
C6: (-5.315,6.506,101.456)
C5: (-4.946,7.091,100.310)
O3': (-9.317,5.628,104.566)
OP1: (-9.108,1.923,100.983)
OP2: (-7.678,3.231,99.302)
C4: (-4.731,8.499,100.324)
O5': (-7.631,3.779,101.753)
C3': (-8.135,5.811,103.811)
C1': (-5.895,6.594,103.862)
O4': (-5.875,5.191,103.689)
C5': (-7.470,3.424,103.143)
P: (-7.850,2.641,100.657)
O2: (-5.397,9.275,103.638)
C4': (-7.187,4.646,103.987)
C2': (-7.307,6.988,104.309)
O2': (-7.339,7.114,105.715)
N1: (-5.478,7.236,102.599)
N3: (-4.881,9.223,101.431)
N4: (-4.372,9.134,99.210)
C6: (-5.315,6.506,101.456)
C5: (-4.946,7.091,100.310)
O3': (-9.317,5.628,104.566)
OP1: (0.144,11.271,91.967)
OP2: (-0.648,10.048,94.099)
C3': (1.975,12.752,97.765)
C1': (-0.051,13.950,98.079)
C5': (1.207,11.707,95.566)
O4': (-0.071,13.376,96.785)
C8: (-1.902,12.280,98.568)
O2': (1.999,15.096,98.516)
C6: (-3.276,13.251,101.647)
C5: (-2.621,12.983,100.435)
C4: (-1.559,13.797,100.098)
P: (-0.272,11.317,93.400)
C4': (1.269,12.948,96.430)
C2': (1.365,13.838,98.649)
C2: (-1.770,14.975,101.939)
N1: (-2.814,14.272,102.395)
N3: (-1.077,14.823,100.812)
N6: (-4.326,12.559,102.094)
N7: (-2.826,12.024,99.461)
N9: (-1.116,13.352,98.878)
O5': (0.893,12.054,94.202)
O3': (3.377,12.925,97.570)
OP2: (-0.648,10.048,94.099)
C3': (1.975,12.752,97.765)
C1': (-0.051,13.950,98.079)
C5': (1.207,11.707,95.566)
O4': (-0.071,13.376,96.785)
C8: (-1.902,12.280,98.568)
O2': (1.999,15.096,98.516)
C6: (-3.276,13.251,101.647)
C5: (-2.621,12.983,100.435)
C4: (-1.559,13.797,100.098)
P: (-0.272,11.317,93.400)
C4': (1.269,12.948,96.430)
C2': (1.365,13.838,98.649)
C2: (-1.770,14.975,101.939)
N1: (-2.814,14.272,102.395)
N3: (-1.077,14.823,100.812)
N6: (-4.326,12.559,102.094)
N7: (-2.826,12.024,99.461)
N9: (-1.116,13.352,98.878)
O5': (0.893,12.054,94.202)
O3': (3.377,12.925,97.570)
Image (generated by PyMOL):