Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0493:0497
Extra
PDB:
ATOM 1 O3' G A 492 12.549 165.946 57.521 1.00 51.87 O
ATOM 2 P C A 493 11.955 164.479 57.242 1.00 52.93 P
ATOM 3 OP1 C A 493 10.849 164.632 56.263 1.00 54.46 O
ATOM 4 OP2 C A 493 11.697 163.808 58.542 1.00 53.55 O
ATOM 5 O5' C A 493 13.142 163.713 56.506 1.00 51.57 O
ATOM 6 C5' C A 493 13.653 164.192 55.251 1.00 51.36 C
ATOM 7 C4' C A 493 14.723 163.265 54.734 1.00 49.97 C
ATOM 8 O4' C A 493 15.831 163.240 55.669 1.00 49.32 O
ATOM 9 C3' C A 493 14.305 161.814 54.602 1.00 49.11 C
ATOM 10 O3' C A 493 13.622 161.598 53.371 1.00 48.51 O
ATOM 11 C2' C A 493 15.641 161.086 54.689 1.00 49.09 C
ATOM 12 O2' C A 493 16.380 161.116 53.478 1.00 48.15 O
ATOM 13 C1' C A 493 16.371 161.934 55.733 1.00 47.34 C
ATOM 14 N1 C A 493 16.242 161.451 57.119 1.00 46.34 N
ATOM 15 C2 C A 493 17.115 160.458 57.570 1.00 45.34 C
ATOM 16 O2 C A 493 17.947 159.988 56.781 1.00 47.27 O
ATOM 17 N3 C A 493 17.032 160.036 58.851 1.00 44.44 N
ATOM 18 C4 C A 493 16.126 160.569 59.673 1.00 45.63 C
ATOM 19 N4 C A 493 16.103 160.145 60.935 1.00 45.48 N
ATOM 20 C5 C A 493 15.209 161.568 59.237 1.00 45.78 C
ATOM 21 C6 C A 493 15.299 161.974 57.963 1.00 47.43 C
ATOM 22 P G A 494 12.297 160.694 53.341 1.00 48.07 P
ATOM 23 OP1 G A 494 11.741 160.804 51.975 1.00 48.14 O
ATOM 24 OP2 G A 494 11.443 161.018 54.518 1.00 46.39 O
ATOM 25 O5' G A 494 12.827 159.206 53.524 1.00 48.74 O
TER
ATOM 1 O3' A B 496 14.270 152.664 62.535 1.00 51.36 O
ATOM 2 P A B 497 14.332 154.108 63.234 1.00 54.06 P
ATOM 3 OP1 A B 497 13.558 154.011 64.495 1.00 54.85 O
ATOM 4 OP2 A B 497 13.993 155.158 62.241 1.00 52.16 O
ATOM 5 O5' A B 497 15.854 154.260 63.658 1.00 53.51 O
ATOM 6 C5' A B 497 16.864 154.360 62.670 1.00 54.61 C
ATOM 7 C4' A B 497 18.217 154.223 63.299 1.00 55.61 C
ATOM 8 O4' A B 497 19.217 154.410 62.267 1.00 56.06 O
ATOM 9 C3' A B 497 18.548 155.242 64.379 1.00 55.95 C
ATOM 10 O3' A B 497 19.475 154.695 65.307 1.00 59.75 O
ATOM 11 C2' A B 497 19.148 156.394 63.584 1.00 55.62 C
ATOM 12 O2' A B 497 20.099 157.122 64.326 1.00 57.49 O
ATOM 13 C1' A B 497 19.813 155.683 62.402 1.00 55.06 C
ATOM 14 N9 A B 497 19.631 156.411 61.140 1.00 53.49 N
ATOM 15 C8 A B 497 18.635 157.302 60.819 1.00 53.23 C
ATOM 16 N7 A B 497 18.780 157.856 59.642 1.00 53.40 N
ATOM 17 C5 A B 497 19.940 157.282 59.142 1.00 52.29 C
ATOM 18 C6 A B 497 20.647 157.467 57.936 1.00 52.12 C
ATOM 19 N6 A B 497 20.286 158.329 56.983 1.00 50.91 N
ATOM 20 N1 A B 497 21.758 156.729 57.744 1.00 51.23 N
ATOM 21 C2 A B 497 22.132 155.875 58.702 1.00 51.05 C
ATOM 22 N3 A B 497 21.563 155.621 59.878 1.00 51.87 N
ATOM 23 C4 A B 497 20.459 156.369 60.042 1.00 52.69 C
ATOM 24 P U B 498 19.282 154.965 66.880 1.00 60.66 P
ATOM 25 OP1 U B 498 17.852 154.748 67.208 1.00 61.58 O
ATOM 26 OP2 U B 498 19.924 156.251 67.229 1.00 62.10 O
ATOM 27 O5' U B 498 20.117 153.807 67.583 1.00 64.71 O
TER
ATOM 2 P C A 493 11.955 164.479 57.242 1.00 52.93 P
ATOM 3 OP1 C A 493 10.849 164.632 56.263 1.00 54.46 O
ATOM 4 OP2 C A 493 11.697 163.808 58.542 1.00 53.55 O
ATOM 5 O5' C A 493 13.142 163.713 56.506 1.00 51.57 O
ATOM 6 C5' C A 493 13.653 164.192 55.251 1.00 51.36 C
ATOM 7 C4' C A 493 14.723 163.265 54.734 1.00 49.97 C
ATOM 8 O4' C A 493 15.831 163.240 55.669 1.00 49.32 O
ATOM 9 C3' C A 493 14.305 161.814 54.602 1.00 49.11 C
ATOM 10 O3' C A 493 13.622 161.598 53.371 1.00 48.51 O
ATOM 11 C2' C A 493 15.641 161.086 54.689 1.00 49.09 C
ATOM 12 O2' C A 493 16.380 161.116 53.478 1.00 48.15 O
ATOM 13 C1' C A 493 16.371 161.934 55.733 1.00 47.34 C
ATOM 14 N1 C A 493 16.242 161.451 57.119 1.00 46.34 N
ATOM 15 C2 C A 493 17.115 160.458 57.570 1.00 45.34 C
ATOM 16 O2 C A 493 17.947 159.988 56.781 1.00 47.27 O
ATOM 17 N3 C A 493 17.032 160.036 58.851 1.00 44.44 N
ATOM 18 C4 C A 493 16.126 160.569 59.673 1.00 45.63 C
ATOM 19 N4 C A 493 16.103 160.145 60.935 1.00 45.48 N
ATOM 20 C5 C A 493 15.209 161.568 59.237 1.00 45.78 C
ATOM 21 C6 C A 493 15.299 161.974 57.963 1.00 47.43 C
ATOM 22 P G A 494 12.297 160.694 53.341 1.00 48.07 P
ATOM 23 OP1 G A 494 11.741 160.804 51.975 1.00 48.14 O
ATOM 24 OP2 G A 494 11.443 161.018 54.518 1.00 46.39 O
ATOM 25 O5' G A 494 12.827 159.206 53.524 1.00 48.74 O
TER
ATOM 1 O3' A B 496 14.270 152.664 62.535 1.00 51.36 O
ATOM 2 P A B 497 14.332 154.108 63.234 1.00 54.06 P
ATOM 3 OP1 A B 497 13.558 154.011 64.495 1.00 54.85 O
ATOM 4 OP2 A B 497 13.993 155.158 62.241 1.00 52.16 O
ATOM 5 O5' A B 497 15.854 154.260 63.658 1.00 53.51 O
ATOM 6 C5' A B 497 16.864 154.360 62.670 1.00 54.61 C
ATOM 7 C4' A B 497 18.217 154.223 63.299 1.00 55.61 C
ATOM 8 O4' A B 497 19.217 154.410 62.267 1.00 56.06 O
ATOM 9 C3' A B 497 18.548 155.242 64.379 1.00 55.95 C
ATOM 10 O3' A B 497 19.475 154.695 65.307 1.00 59.75 O
ATOM 11 C2' A B 497 19.148 156.394 63.584 1.00 55.62 C
ATOM 12 O2' A B 497 20.099 157.122 64.326 1.00 57.49 O
ATOM 13 C1' A B 497 19.813 155.683 62.402 1.00 55.06 C
ATOM 14 N9 A B 497 19.631 156.411 61.140 1.00 53.49 N
ATOM 15 C8 A B 497 18.635 157.302 60.819 1.00 53.23 C
ATOM 16 N7 A B 497 18.780 157.856 59.642 1.00 53.40 N
ATOM 17 C5 A B 497 19.940 157.282 59.142 1.00 52.29 C
ATOM 18 C6 A B 497 20.647 157.467 57.936 1.00 52.12 C
ATOM 19 N6 A B 497 20.286 158.329 56.983 1.00 50.91 N
ATOM 20 N1 A B 497 21.758 156.729 57.744 1.00 51.23 N
ATOM 21 C2 A B 497 22.132 155.875 58.702 1.00 51.05 C
ATOM 22 N3 A B 497 21.563 155.621 59.878 1.00 51.87 N
ATOM 23 C4 A B 497 20.459 156.369 60.042 1.00 52.69 C
ATOM 24 P U B 498 19.282 154.965 66.880 1.00 60.66 P
ATOM 25 OP1 U B 498 17.852 154.748 67.208 1.00 61.58 O
ATOM 26 OP2 U B 498 19.924 156.251 67.229 1.00 62.10 O
ATOM 27 O5' U B 498 20.117 153.807 67.583 1.00 64.71 O
TER
Atoms:
C2: (17.115,160.458,57.570)
OP1: (10.849,164.632,56.263)
OP2: (11.697,163.808,58.542)
C4: (16.126,160.569,59.673)
O5': (13.142,163.713,56.506)
C3': (14.305,161.814,54.602)
C1': (16.371,161.934,55.733)
O4': (15.831,163.240,55.669)
C5': (13.653,164.192,55.251)
P: (11.955,164.479,57.242)
O2: (17.947,159.988,56.781)
C4': (14.723,163.265,54.734)
C2': (15.641,161.086,54.689)
O2': (16.380,161.116,53.478)
N1: (16.242,161.451,57.119)
N3: (17.032,160.036,58.851)
N4: (16.103,160.145,60.935)
C6: (15.299,161.974,57.963)
C5: (15.209,161.568,59.237)
O3': (13.622,161.598,53.371)
OP1: (10.849,164.632,56.263)
OP2: (11.697,163.808,58.542)
C4: (16.126,160.569,59.673)
O5': (13.142,163.713,56.506)
C3': (14.305,161.814,54.602)
C1': (16.371,161.934,55.733)
O4': (15.831,163.240,55.669)
C5': (13.653,164.192,55.251)
P: (11.955,164.479,57.242)
O2: (17.947,159.988,56.781)
C4': (14.723,163.265,54.734)
C2': (15.641,161.086,54.689)
O2': (16.380,161.116,53.478)
N1: (16.242,161.451,57.119)
N3: (17.032,160.036,58.851)
N4: (16.103,160.145,60.935)
C6: (15.299,161.974,57.963)
C5: (15.209,161.568,59.237)
O3': (13.622,161.598,53.371)
OP1: (13.558,154.011,64.495)
OP2: (13.993,155.158,62.241)
C3': (18.548,155.242,64.379)
C1': (19.813,155.683,62.402)
C5': (16.864,154.360,62.670)
O4': (19.217,154.410,62.267)
C8: (18.635,157.302,60.819)
O2': (20.099,157.122,64.326)
C6: (20.647,157.467,57.936)
C5: (19.940,157.282,59.142)
C4: (20.459,156.369,60.042)
P: (14.332,154.108,63.234)
C4': (18.217,154.223,63.299)
C2': (19.148,156.394,63.584)
C2: (22.132,155.875,58.702)
N1: (21.758,156.729,57.744)
N3: (21.563,155.621,59.878)
N6: (20.286,158.329,56.983)
N7: (18.780,157.856,59.642)
N9: (19.631,156.411,61.140)
O5': (15.854,154.260,63.658)
O3': (19.475,154.695,65.307)
OP2: (13.993,155.158,62.241)
C3': (18.548,155.242,64.379)
C1': (19.813,155.683,62.402)
C5': (16.864,154.360,62.670)
O4': (19.217,154.410,62.267)
C8: (18.635,157.302,60.819)
O2': (20.099,157.122,64.326)
C6: (20.647,157.467,57.936)
C5: (19.940,157.282,59.142)
C4: (20.459,156.369,60.042)
P: (14.332,154.108,63.234)
C4': (18.217,154.223,63.299)
C2': (19.148,156.394,63.584)
C2: (22.132,155.875,58.702)
N1: (21.758,156.729,57.744)
N3: (21.563,155.621,59.878)
N6: (20.286,158.329,56.983)
N7: (18.780,157.856,59.642)
N9: (19.631,156.411,61.140)
O5': (15.854,154.260,63.658)
O3': (19.475,154.695,65.307)
Image (generated by PyMOL):