ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2PXE:B33:B18

Extra

PDB:
ATOM 1 O3' G A 32 29.851 6.203 24.183 1.00 16.70 O
ATOM 2 P C A 33 29.284 7.159 23.024 1.00 17.51 P
ATOM 3 OP1 C A 33 27.806 7.024 23.005 1.00 16.50 O
ATOM 4 OP2 C A 33 30.056 6.895 21.783 1.00 16.62 O
ATOM 5 O5' C A 33 29.683 8.613 23.531 1.00 15.21 O
ATOM 6 C5' C A 33 29.117 9.146 24.712 1.00 14.29 C
ATOM 7 C4' C A 33 29.747 10.479 25.042 1.00 15.66 C
ATOM 8 O4' C A 33 31.171 10.309 25.271 1.00 14.85 O
ATOM 9 C3' C A 33 29.697 11.537 23.958 1.00 15.90 C
ATOM 10 O3' C A 33 28.424 12.165 23.921 1.00 18.63 O
ATOM 11 C2' C A 33 30.795 12.481 24.427 1.00 16.11 C
ATOM 12 O2' C A 33 30.408 13.242 25.558 1.00 13.81 O
ATOM 13 C1' C A 33 31.860 11.475 24.862 1.00 15.49 C
ATOM 14 N1 C A 33 32.787 11.121 23.771 1.00 15.85 N
ATOM 15 C2 C A 33 33.813 12.016 23.461 1.00 17.89 C
ATOM 16 O2 C A 33 33.906 13.072 24.124 1.00 20.89 O
ATOM 17 N3 C A 33 34.674 11.723 22.454 1.00 17.26 N
ATOM 18 C4 C A 33 34.527 10.593 21.761 1.00 17.82 C
ATOM 19 N4 C A 33 35.385 10.359 20.744 1.00 15.41 N
ATOM 20 C5 C A 33 33.493 9.656 22.065 1.00 15.30 C
ATOM 21 C6 C A 33 32.654 9.958 23.069 1.00 14.38 C
ATOM 22 P A A 34 27.800 12.601 22.509 1.00 21.20 P
ATOM 23 OP1 A A 34 26.384 12.994 22.711 1.00 15.41 O
ATOM 24 OP2 A A 34 28.128 11.517 21.565 1.00 12.78 O
ATOM 25 O5' A A 34 28.652 13.886 22.086 1.00 21.75 O
TER

ATOM 1 O3' C B 17 38.486 7.985 16.792 1.00 56.91 O
ATOM 2 P A B 18 39.506 8.077 18.025 1.00 45.37 P
ATOM 3 OP1 A B 18 40.656 7.172 17.734 1.00 43.89 O
ATOM 4 OP2 A B 18 38.713 7.867 19.265 1.00 41.62 O
ATOM 5 O5' A B 18 40.022 9.588 17.941 1.00 43.02 O
ATOM 6 C5' A B 18 40.773 10.043 16.811 1.00 34.29 C
ATOM 7 C4' A B 18 40.913 11.550 16.832 1.00 30.17 C
ATOM 8 O4' A B 18 39.591 12.148 16.807 1.00 29.85 O
ATOM 9 C3' A B 18 41.547 12.166 18.067 1.00 28.37 C
ATOM 10 O3' A B 18 42.960 12.103 18.020 1.00 25.76 O
ATOM 11 C2' A B 18 41.032 13.601 18.000 1.00 27.73 C
ATOM 12 O2' A B 18 41.681 14.424 17.055 1.00 27.25 O
ATOM 13 C1' A B 18 39.602 13.372 17.525 1.00 27.20 C
ATOM 14 N9 A B 18 38.667 13.265 18.642 1.00 23.75 N
ATOM 15 C8 A B 18 38.015 12.151 19.107 1.00 24.51 C
ATOM 16 N7 A B 18 37.225 12.391 20.130 1.00 24.71 N
ATOM 17 C5 A B 18 37.371 13.753 20.349 1.00 22.51 C
ATOM 18 C6 A B 18 36.789 14.627 21.279 1.00 22.72 C
ATOM 19 N6 A B 18 35.894 14.244 22.193 1.00 21.39 N
ATOM 20 N1 A B 18 37.156 15.927 21.233 1.00 21.51 N
ATOM 21 C2 A B 18 38.039 16.309 20.305 1.00 20.97 C
ATOM 22 N3 A B 18 38.645 15.585 19.370 1.00 20.03 N
ATOM 23 C4 A B 18 38.263 14.301 19.447 1.00 22.37 C
ATOM 24 P G B 19 43.758 11.429 19.235 1.00 27.16 P
ATOM 25 OP1 G B 19 45.208 11.678 19.046 1.00 22.94 O
ATOM 26 OP2 G B 19 43.254 10.036 19.394 1.00 22.51 O
ATOM 27 O5' G B 19 43.287 12.249 20.505 1.00 27.37 O
TER

Atoms:
C2: (33.813,12.016,23.461)
OP1: (27.806,7.024,23.005)
OP2: (30.056,6.895,21.783)
C4: (34.527,10.593,21.761)
O5': (29.683,8.613,23.531)
C3': (29.697,11.537,23.958)
C1': (31.860,11.475,24.862)
O4': (31.171,10.309,25.271)
C5': (29.117,9.146,24.712)
P: (29.284,7.159,23.024)
O2: (33.906,13.072,24.124)
C4': (29.747,10.479,25.042)
C2': (30.795,12.481,24.427)
O2': (30.408,13.242,25.558)
N1: (32.787,11.121,23.771)
N3: (34.674,11.723,22.454)
N4: (35.385,10.359,20.744)
C6: (32.654,9.958,23.069)
C5: (33.493,9.656,22.065)
O3': (28.424,12.165,23.921)
OP1: (40.656,7.172,17.734)
OP2: (38.713,7.867,19.265)
C3': (41.547,12.166,18.067)
C1': (39.602,13.372,17.525)
C5': (40.773,10.043,16.811)
O4': (39.591,12.148,16.807)
C8: (38.015,12.151,19.107)
O2': (41.681,14.424,17.055)
C6: (36.789,14.627,21.279)
C5: (37.371,13.753,20.349)
C4: (38.263,14.301,19.447)
P: (39.506,8.077,18.025)
C4': (40.913,11.550,16.832)
C2': (41.032,13.601,18.000)
C2: (38.039,16.309,20.305)
N1: (37.156,15.927,21.233)
N3: (38.645,15.585,19.370)
N6: (35.894,14.244,22.193)
N7: (37.225,12.391,20.130)
N9: (38.667,13.265,18.642)
O5': (40.022,9.588,17.941)
O3': (42.960,12.103,18.020)
Image (generated by PyMOL):
PyMOL image
show in jmol