Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11580:11654
Extra
PDB:
ATOM 1 O3' G A1579 -6.777 41.534 163.698 1.00 90.44 O
ATOM 2 P U A1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 3 OP1 U A1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 4 OP2 U A1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 5 O5' U A1580 -8.067 39.396 164.024 1.00 82.46 O
ATOM 6 C5' U A1580 -8.528 38.326 164.841 1.00 82.66 C
ATOM 7 C4' U A1580 -9.590 37.501 164.152 1.00 82.15 C
ATOM 8 O4' U A1580 -10.659 38.351 163.678 1.00 82.36 O
ATOM 9 C3' U A1580 -9.148 36.740 162.922 1.00 81.08 C
ATOM 10 O3' U A1580 -8.505 35.531 163.259 1.00 80.76 O
ATOM 11 C2' U A1580 -10.457 36.543 162.147 1.00 80.80 C
ATOM 12 O2' U A1580 -11.186 35.430 162.652 1.00 80.86 O
ATOM 13 C1' U A1580 -11.232 37.799 162.515 1.00 81.59 C
ATOM 14 N1 U A1580 -11.245 38.821 161.460 1.00 81.32 N
ATOM 15 C2 U A1580 -12.111 38.656 160.427 1.00 80.84 C
ATOM 16 O2 U A1580 -12.788 37.661 160.308 1.00 80.56 O
ATOM 17 N3 U A1580 -12.144 39.668 159.527 1.00 80.68 N
ATOM 18 C4 U A1580 -11.417 40.819 159.591 1.00 80.99 C
ATOM 19 O4 U A1580 -11.527 41.655 158.706 1.00 80.81 O
ATOM 20 C5 U A1580 -10.554 40.926 160.706 1.00 81.51 C
ATOM 21 C6 U A1580 -10.514 39.951 161.592 1.00 81.66 C
ATOM 22 P A A1581 -6.991 35.277 162.822 1.00 78.18 P
ATOM 23 OP1 A A1581 -6.550 34.009 163.495 1.00 78.09 O
ATOM 24 OP2 A A1581 -6.244 36.521 163.097 1.00 78.63 O
ATOM 25 O5' A A1581 -7.120 35.064 161.238 1.00 77.20 O
TER
ATOM 1 O3' C B1653 -11.459 34.603 154.416 1.00 78.26 O
ATOM 2 P C B1654 -13.061 34.545 154.633 1.00 78.32 P
ATOM 3 OP1 C B1654 -13.325 33.548 155.695 1.00 78.63 O
ATOM 4 OP2 C B1654 -13.664 34.336 153.298 1.00 77.66 O
ATOM 5 O5' C B1654 -13.421 36.008 155.166 1.00 79.16 O
ATOM 6 C5' C B1654 -12.876 36.505 156.373 1.00 79.87 C
ATOM 7 C4' C B1654 -13.293 37.938 156.623 1.00 80.58 C
ATOM 8 O4' C B1654 -12.604 38.832 155.713 1.00 80.25 O
ATOM 9 C3' C B1654 -14.756 38.266 156.390 1.00 80.87 C
ATOM 10 O3' C B1654 -15.593 37.828 157.437 1.00 81.47 O
ATOM 11 C2' C B1654 -14.721 39.781 156.212 1.00 81.29 C
ATOM 12 O2' C B1654 -14.544 40.427 157.466 1.00 82.18 O
ATOM 13 C1' C B1654 -13.434 39.943 155.414 1.00 80.65 C
ATOM 14 N1 C B1654 -13.658 39.992 153.934 1.00 79.91 N
ATOM 15 C2 C B1654 -14.144 41.148 153.313 1.00 80.10 C
ATOM 16 O2 C B1654 -14.464 42.118 154.009 1.00 80.89 O
ATOM 17 N3 C B1654 -14.277 41.187 151.971 1.00 79.44 N
ATOM 18 C4 C B1654 -13.923 40.147 151.241 1.00 78.61 C
ATOM 19 N4 C B1654 -14.066 40.228 149.923 1.00 77.99 N
ATOM 20 C5 C B1654 -13.409 38.966 151.829 1.00 78.39 C
ATOM 21 C6 C B1654 -13.290 38.934 153.156 1.00 79.05 C
ATOM 22 P C B1655 -17.114 37.466 157.139 1.00 82.42 P
ATOM 23 OP1 C B1655 -17.672 36.946 158.399 1.00 83.06 O
ATOM 24 OP2 C B1655 -17.155 36.601 155.925 1.00 81.47 O
ATOM 25 O5' C B1655 -17.743 38.893 156.809 1.00 82.87 O
TER
ATOM 2 P U A1580 -7.935 40.866 164.618 1.00 83.33 P
ATOM 3 OP1 U A1580 -9.197 41.621 164.375 1.00 83.68 O
ATOM 4 OP2 U A1580 -7.407 40.794 165.999 1.00 84.05 O
ATOM 5 O5' U A1580 -8.067 39.396 164.024 1.00 82.46 O
ATOM 6 C5' U A1580 -8.528 38.326 164.841 1.00 82.66 C
ATOM 7 C4' U A1580 -9.590 37.501 164.152 1.00 82.15 C
ATOM 8 O4' U A1580 -10.659 38.351 163.678 1.00 82.36 O
ATOM 9 C3' U A1580 -9.148 36.740 162.922 1.00 81.08 C
ATOM 10 O3' U A1580 -8.505 35.531 163.259 1.00 80.76 O
ATOM 11 C2' U A1580 -10.457 36.543 162.147 1.00 80.80 C
ATOM 12 O2' U A1580 -11.186 35.430 162.652 1.00 80.86 O
ATOM 13 C1' U A1580 -11.232 37.799 162.515 1.00 81.59 C
ATOM 14 N1 U A1580 -11.245 38.821 161.460 1.00 81.32 N
ATOM 15 C2 U A1580 -12.111 38.656 160.427 1.00 80.84 C
ATOM 16 O2 U A1580 -12.788 37.661 160.308 1.00 80.56 O
ATOM 17 N3 U A1580 -12.144 39.668 159.527 1.00 80.68 N
ATOM 18 C4 U A1580 -11.417 40.819 159.591 1.00 80.99 C
ATOM 19 O4 U A1580 -11.527 41.655 158.706 1.00 80.81 O
ATOM 20 C5 U A1580 -10.554 40.926 160.706 1.00 81.51 C
ATOM 21 C6 U A1580 -10.514 39.951 161.592 1.00 81.66 C
ATOM 22 P A A1581 -6.991 35.277 162.822 1.00 78.18 P
ATOM 23 OP1 A A1581 -6.550 34.009 163.495 1.00 78.09 O
ATOM 24 OP2 A A1581 -6.244 36.521 163.097 1.00 78.63 O
ATOM 25 O5' A A1581 -7.120 35.064 161.238 1.00 77.20 O
TER
ATOM 1 O3' C B1653 -11.459 34.603 154.416 1.00 78.26 O
ATOM 2 P C B1654 -13.061 34.545 154.633 1.00 78.32 P
ATOM 3 OP1 C B1654 -13.325 33.548 155.695 1.00 78.63 O
ATOM 4 OP2 C B1654 -13.664 34.336 153.298 1.00 77.66 O
ATOM 5 O5' C B1654 -13.421 36.008 155.166 1.00 79.16 O
ATOM 6 C5' C B1654 -12.876 36.505 156.373 1.00 79.87 C
ATOM 7 C4' C B1654 -13.293 37.938 156.623 1.00 80.58 C
ATOM 8 O4' C B1654 -12.604 38.832 155.713 1.00 80.25 O
ATOM 9 C3' C B1654 -14.756 38.266 156.390 1.00 80.87 C
ATOM 10 O3' C B1654 -15.593 37.828 157.437 1.00 81.47 O
ATOM 11 C2' C B1654 -14.721 39.781 156.212 1.00 81.29 C
ATOM 12 O2' C B1654 -14.544 40.427 157.466 1.00 82.18 O
ATOM 13 C1' C B1654 -13.434 39.943 155.414 1.00 80.65 C
ATOM 14 N1 C B1654 -13.658 39.992 153.934 1.00 79.91 N
ATOM 15 C2 C B1654 -14.144 41.148 153.313 1.00 80.10 C
ATOM 16 O2 C B1654 -14.464 42.118 154.009 1.00 80.89 O
ATOM 17 N3 C B1654 -14.277 41.187 151.971 1.00 79.44 N
ATOM 18 C4 C B1654 -13.923 40.147 151.241 1.00 78.61 C
ATOM 19 N4 C B1654 -14.066 40.228 149.923 1.00 77.99 N
ATOM 20 C5 C B1654 -13.409 38.966 151.829 1.00 78.39 C
ATOM 21 C6 C B1654 -13.290 38.934 153.156 1.00 79.05 C
ATOM 22 P C B1655 -17.114 37.466 157.139 1.00 82.42 P
ATOM 23 OP1 C B1655 -17.672 36.946 158.399 1.00 83.06 O
ATOM 24 OP2 C B1655 -17.155 36.601 155.925 1.00 81.47 O
ATOM 25 O5' C B1655 -17.743 38.893 156.809 1.00 82.87 O
TER
Atoms:
C4: (-11.417,40.819,159.591)
N3: (-12.144,39.668,159.527)
OP1: (-9.197,41.621,164.375)
OP2: (-7.407,40.794,165.999)
C2: (-12.111,38.656,160.427)
C1': (-11.232,37.799,162.515)
C3': (-9.148,36.740,162.922)
O5': (-8.067,39.396,164.024)
O4': (-10.659,38.351,163.678)
C5': (-8.528,38.326,164.841)
P: (-7.935,40.866,164.618)
C4': (-9.590,37.501,164.152)
C2': (-10.457,36.543,162.147)
O2': (-11.186,35.430,162.652)
N1: (-11.245,38.821,161.460)
O4: (-11.527,41.655,158.706)
O2: (-12.788,37.661,160.308)
C6: (-10.514,39.951,161.592)
C5: (-10.554,40.926,160.706)
O3': (-8.505,35.531,163.259)
N3: (-12.144,39.668,159.527)
OP1: (-9.197,41.621,164.375)
OP2: (-7.407,40.794,165.999)
C2: (-12.111,38.656,160.427)
C1': (-11.232,37.799,162.515)
C3': (-9.148,36.740,162.922)
O5': (-8.067,39.396,164.024)
O4': (-10.659,38.351,163.678)
C5': (-8.528,38.326,164.841)
P: (-7.935,40.866,164.618)
C4': (-9.590,37.501,164.152)
C2': (-10.457,36.543,162.147)
O2': (-11.186,35.430,162.652)
N1: (-11.245,38.821,161.460)
O4: (-11.527,41.655,158.706)
O2: (-12.788,37.661,160.308)
C6: (-10.514,39.951,161.592)
C5: (-10.554,40.926,160.706)
O3': (-8.505,35.531,163.259)
C2: (-14.144,41.148,153.313)
OP1: (-13.325,33.548,155.695)
OP2: (-13.664,34.336,153.298)
C4: (-13.923,40.147,151.241)
O5': (-13.421,36.008,155.166)
C3': (-14.756,38.266,156.390)
C1': (-13.434,39.943,155.414)
O4': (-12.604,38.832,155.713)
C5': (-12.876,36.505,156.373)
P: (-13.061,34.545,154.633)
O2: (-14.464,42.118,154.009)
C4': (-13.293,37.938,156.623)
C2': (-14.721,39.781,156.212)
O2': (-14.544,40.427,157.466)
N1: (-13.658,39.992,153.934)
N3: (-14.277,41.187,151.971)
N4: (-14.066,40.228,149.923)
C6: (-13.290,38.934,153.156)
C5: (-13.409,38.966,151.829)
O3': (-15.593,37.828,157.437)
OP1: (-13.325,33.548,155.695)
OP2: (-13.664,34.336,153.298)
C4: (-13.923,40.147,151.241)
O5': (-13.421,36.008,155.166)
C3': (-14.756,38.266,156.390)
C1': (-13.434,39.943,155.414)
O4': (-12.604,38.832,155.713)
C5': (-12.876,36.505,156.373)
P: (-13.061,34.545,154.633)
O2: (-14.464,42.118,154.009)
C4': (-13.293,37.938,156.623)
C2': (-14.721,39.781,156.212)
O2': (-14.544,40.427,157.466)
N1: (-13.658,39.992,153.934)
N3: (-14.277,41.187,151.971)
N4: (-14.066,40.228,149.923)
C6: (-13.290,38.934,153.156)
C5: (-13.409,38.966,151.829)
O3': (-15.593,37.828,157.437)
Image (generated by PyMOL):