ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2165:2147

Extra

PDB:
ATOM 1 O3' G A 164 -24.344 102.350 40.986 1.00 99.98 O
ATOM 2 P C A 165 -25.254 102.881 42.196 1.00 96.40 P
ATOM 3 OP1 C A 165 -25.499 104.317 41.968 1.00 97.73 O
ATOM 4 OP2 C A 165 -24.602 102.467 43.460 1.00 95.31 O
ATOM 5 O5' C A 165 -26.600 102.050 41.974 1.00 96.08 O
ATOM 6 C5' C A 165 -27.817 102.430 42.598 1.00 96.26 C
ATOM 7 C4' C A 165 -28.969 102.513 41.612 1.00 97.09 C
ATOM 8 O4' C A 165 -29.173 101.239 40.959 1.00 96.48 O
ATOM 9 C3' C A 165 -30.318 102.855 42.219 1.00 97.31 C
ATOM 10 O3' C A 165 -30.482 104.245 42.352 1.00 98.41 O
ATOM 11 C2' C A 165 -31.323 102.225 41.261 1.00 97.56 C
ATOM 12 O2' C A 165 -31.631 103.121 40.214 1.00 98.95 O
ATOM 13 C1' C A 165 -30.541 101.055 40.670 1.00 96.79 C
ATOM 14 N1 C A 165 -30.971 99.745 41.202 1.00 95.56 N
ATOM 15 C2 C A 165 -32.084 99.127 40.635 1.00 95.67 C
ATOM 16 O2 C A 165 -32.705 99.704 39.737 1.00 96.78 O
ATOM 17 N3 C A 165 -32.447 97.906 41.101 1.00 94.56 N
ATOM 18 C4 C A 165 -31.758 97.299 42.069 1.00 93.41 C
ATOM 19 N4 C A 165 -32.180 96.110 42.477 1.00 92.41 N
ATOM 20 C5 C A 165 -30.615 97.891 42.663 1.00 93.27 C
ATOM 21 C6 C A 165 -30.261 99.097 42.189 1.00 94.37 C
ATOM 22 P U A 166 -30.741 104.894 43.780 1.00 86.30 P
ATOM 23 OP1 U A 166 -30.540 106.371 43.625 1.00 87.58 O
ATOM 24 OP2 U A 166 -29.916 104.143 44.769 1.00 84.99 O
ATOM 25 O5' U A 166 -32.284 104.582 44.014 1.00 86.28 O
TER

ATOM 1 O3' A B 146 -33.658 90.037 43.640 1.00 81.48 O
ATOM 2 P A B 147 -32.925 89.979 42.203 1.00 83.79 P
ATOM 3 OP1 A B 147 -32.417 88.581 42.026 1.00 82.85 O
ATOM 4 OP2 A B 147 -31.954 91.116 42.138 1.00 84.35 O
ATOM 5 O5' A B 147 -34.129 90.229 41.205 1.00 84.80 O
ATOM 6 C5' A B 147 -35.270 89.390 41.245 1.00 84.52 C
ATOM 7 C4' A B 147 -36.525 90.139 40.890 1.00 85.56 C
ATOM 8 O4' A B 147 -36.753 91.214 41.833 1.00 85.82 O
ATOM 9 C3' A B 147 -36.529 90.831 39.546 1.00 86.80 C
ATOM 10 O3' A B 147 -36.768 89.936 38.475 1.00 86.91 O
ATOM 11 C2' A B 147 -37.632 91.857 39.727 1.00 87.72 C
ATOM 12 O2' A B 147 -38.902 91.232 39.616 1.00 87.76 O
ATOM 13 C1' A B 147 -37.421 92.274 41.189 1.00 87.11 C
ATOM 14 N9 A B 147 -36.600 93.497 41.299 1.00 87.66 N
ATOM 15 C8 A B 147 -35.244 93.645 41.350 1.00 87.35 C
ATOM 16 N7 A B 147 -34.840 94.889 41.430 1.00 88.08 N
ATOM 17 C5 A B 147 -36.006 95.616 41.416 1.00 88.94 C
ATOM 18 C6 A B 147 -36.264 96.997 41.467 1.00 90.00 C
ATOM 19 N6 A B 147 -35.323 97.940 41.542 1.00 90.40 N
ATOM 20 N1 A B 147 -37.557 97.384 41.438 1.00 90.69 N
ATOM 21 C2 A B 147 -38.504 96.441 41.361 1.00 90.33 C
ATOM 22 N3 A B 147 -38.385 95.116 41.303 1.00 89.35 N
ATOM 23 C4 A B 147 -37.094 94.768 41.332 1.00 88.69 C
ATOM 24 P C B 148 -35.633 89.663 37.375 1.00 79.92 P
ATOM 25 OP1 C B 148 -36.251 88.823 36.324 1.00 80.19 O
ATOM 26 OP2 C B 148 -34.437 89.155 38.085 1.00 78.83 O
ATOM 27 O5' C B 148 -35.340 91.119 36.811 1.00 81.16 O
TER

Atoms:
C2: (-32.084,99.127,40.635)
OP1: (-25.499,104.317,41.968)
OP2: (-24.602,102.467,43.460)
C4: (-31.758,97.299,42.069)
O5': (-26.600,102.050,41.974)
C3': (-30.318,102.855,42.219)
C1': (-30.541,101.055,40.670)
O4': (-29.173,101.239,40.959)
C5': (-27.817,102.430,42.598)
P: (-25.254,102.881,42.196)
O2: (-32.705,99.704,39.737)
C4': (-28.969,102.513,41.612)
C2': (-31.323,102.225,41.261)
O2': (-31.631,103.121,40.214)
N1: (-30.971,99.745,41.202)
N3: (-32.447,97.906,41.101)
N4: (-32.180,96.110,42.477)
C6: (-30.261,99.097,42.189)
C5: (-30.615,97.891,42.663)
O3': (-30.482,104.245,42.352)
OP1: (-32.417,88.581,42.026)
OP2: (-31.954,91.116,42.138)
C3': (-36.529,90.831,39.546)
C1': (-37.421,92.274,41.189)
C5': (-35.270,89.390,41.245)
O4': (-36.753,91.214,41.833)
C8: (-35.244,93.645,41.350)
O2': (-38.902,91.232,39.616)
C6: (-36.264,96.997,41.467)
C5: (-36.006,95.616,41.416)
C4: (-37.094,94.768,41.332)
P: (-32.925,89.979,42.203)
C4': (-36.525,90.139,40.890)
C2': (-37.632,91.857,39.727)
C2: (-38.504,96.441,41.361)
N1: (-37.557,97.384,41.438)
N3: (-38.385,95.116,41.303)
N6: (-35.323,97.940,41.542)
N7: (-34.840,94.889,41.430)
N9: (-36.600,93.497,41.299)
O5': (-34.129,90.229,41.205)
O3': (-36.768,89.936,38.475)
Image (generated by PyMOL):
PyMOL image
show in jmol