Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0946:0964
Extra
PDB:
ATOM 1 O3' G A 945 58.944 59.662 121.923 1.00 50.00 O
ATOM 2 P C A 946 60.288 59.825 122.798 1.00 52.33 P
ATOM 3 OP1 C A 946 60.170 58.787 123.855 1.00 53.76 O
ATOM 4 OP2 C A 946 60.520 61.241 123.185 1.00 50.13 O
ATOM 5 O5' C A 946 61.452 59.400 121.803 1.00 51.44 O
ATOM 6 C5' C A 946 61.417 58.127 121.152 1.00 55.64 C
ATOM 7 C4' C A 946 62.454 58.073 120.067 1.00 59.87 C
ATOM 8 O4' C A 946 62.149 59.051 119.044 1.00 59.72 O
ATOM 9 C3' C A 946 63.873 58.401 120.500 1.00 62.70 C
ATOM 10 O3' C A 946 64.442 57.217 121.056 1.00 68.94 O
ATOM 11 C2' C A 946 64.514 58.817 119.181 1.00 61.26 C
ATOM 12 O2' C A 946 64.836 57.695 118.375 1.00 60.39 O
ATOM 13 C1' C A 946 63.356 59.562 118.506 1.00 59.38 C
ATOM 14 N1 C A 946 63.349 61.038 118.634 1.00 56.99 N
ATOM 15 C2 C A 946 64.214 61.789 117.827 1.00 54.64 C
ATOM 16 O2 C A 946 65.002 61.199 117.082 1.00 55.14 O
ATOM 17 N3 C A 946 64.166 63.138 117.880 1.00 52.78 N
ATOM 18 C4 C A 946 63.305 63.743 118.699 1.00 53.30 C
ATOM 19 N4 C A 946 63.268 65.081 118.692 1.00 50.90 N
ATOM 20 C5 C A 946 62.438 63.005 119.559 1.00 53.76 C
ATOM 21 C6 C A 946 62.496 61.669 119.498 1.00 55.53 C
ATOM 22 P G A 947 65.915 57.235 121.703 1.00 71.26 P
ATOM 23 OP1 G A 947 65.755 57.336 123.179 1.00 68.82 O
ATOM 24 OP2 G A 947 66.753 58.238 120.990 1.00 71.89 O
ATOM 25 O5' G A 947 66.458 55.788 121.309 1.00 74.20 O
TER
ATOM 1 O3' C B 963 62.708 70.989 119.910 1.00 40.56 O
ATOM 2 P A B 964 61.682 70.681 118.721 1.00 41.70 P
ATOM 3 OP1 A B 964 60.817 71.880 118.608 1.00 42.07 O
ATOM 4 OP2 A B 964 61.065 69.339 118.921 1.00 39.66 O
ATOM 5 O5' A B 964 62.629 70.608 117.445 1.00 38.85 O
ATOM 6 C5' A B 964 63.472 71.711 117.100 1.00 34.20 C
ATOM 7 C4' A B 964 64.241 71.391 115.852 1.00 35.62 C
ATOM 8 O4' A B 964 65.283 70.426 116.131 1.00 35.92 O
ATOM 9 C3' A B 964 63.421 70.748 114.750 1.00 35.67 C
ATOM 10 O3' A B 964 62.712 71.759 114.049 1.00 36.29 O
ATOM 11 C2' A B 964 64.493 70.060 113.910 1.00 35.93 C
ATOM 12 O2' A B 964 65.170 70.956 113.055 1.00 38.48 O
ATOM 13 C1' A B 964 65.480 69.606 114.991 1.00 35.83 C
ATOM 14 N9 A B 964 65.366 68.204 115.394 1.00 35.21 N
ATOM 15 C8 A B 964 64.527 67.643 116.326 1.00 35.65 C
ATOM 16 N7 A B 964 64.688 66.350 116.470 1.00 35.40 N
ATOM 17 C5 A B 964 65.695 66.038 115.571 1.00 36.18 C
ATOM 18 C6 A B 964 66.332 64.828 115.245 1.00 37.44 C
ATOM 19 N6 A B 964 66.042 63.659 115.818 1.00 36.74 N
ATOM 20 N1 A B 964 67.295 64.861 114.298 1.00 36.93 N
ATOM 21 C2 A B 964 67.593 66.032 113.728 1.00 36.27 C
ATOM 22 N3 A B 964 67.071 67.235 113.951 1.00 37.02 N
ATOM 23 C4 A B 964 66.116 67.169 114.896 1.00 36.05 C
ATOM 24 P A B 965 61.433 71.380 113.152 1.00 38.61 P
ATOM 25 OP1 A B 965 60.354 72.373 113.442 1.00 35.72 O
ATOM 26 OP2 A B 965 61.150 69.928 113.300 1.00 37.89 O
ATOM 27 O5' A B 965 61.958 71.629 111.667 1.00 38.93 O
TER
ATOM 2 P C A 946 60.288 59.825 122.798 1.00 52.33 P
ATOM 3 OP1 C A 946 60.170 58.787 123.855 1.00 53.76 O
ATOM 4 OP2 C A 946 60.520 61.241 123.185 1.00 50.13 O
ATOM 5 O5' C A 946 61.452 59.400 121.803 1.00 51.44 O
ATOM 6 C5' C A 946 61.417 58.127 121.152 1.00 55.64 C
ATOM 7 C4' C A 946 62.454 58.073 120.067 1.00 59.87 C
ATOM 8 O4' C A 946 62.149 59.051 119.044 1.00 59.72 O
ATOM 9 C3' C A 946 63.873 58.401 120.500 1.00 62.70 C
ATOM 10 O3' C A 946 64.442 57.217 121.056 1.00 68.94 O
ATOM 11 C2' C A 946 64.514 58.817 119.181 1.00 61.26 C
ATOM 12 O2' C A 946 64.836 57.695 118.375 1.00 60.39 O
ATOM 13 C1' C A 946 63.356 59.562 118.506 1.00 59.38 C
ATOM 14 N1 C A 946 63.349 61.038 118.634 1.00 56.99 N
ATOM 15 C2 C A 946 64.214 61.789 117.827 1.00 54.64 C
ATOM 16 O2 C A 946 65.002 61.199 117.082 1.00 55.14 O
ATOM 17 N3 C A 946 64.166 63.138 117.880 1.00 52.78 N
ATOM 18 C4 C A 946 63.305 63.743 118.699 1.00 53.30 C
ATOM 19 N4 C A 946 63.268 65.081 118.692 1.00 50.90 N
ATOM 20 C5 C A 946 62.438 63.005 119.559 1.00 53.76 C
ATOM 21 C6 C A 946 62.496 61.669 119.498 1.00 55.53 C
ATOM 22 P G A 947 65.915 57.235 121.703 1.00 71.26 P
ATOM 23 OP1 G A 947 65.755 57.336 123.179 1.00 68.82 O
ATOM 24 OP2 G A 947 66.753 58.238 120.990 1.00 71.89 O
ATOM 25 O5' G A 947 66.458 55.788 121.309 1.00 74.20 O
TER
ATOM 1 O3' C B 963 62.708 70.989 119.910 1.00 40.56 O
ATOM 2 P A B 964 61.682 70.681 118.721 1.00 41.70 P
ATOM 3 OP1 A B 964 60.817 71.880 118.608 1.00 42.07 O
ATOM 4 OP2 A B 964 61.065 69.339 118.921 1.00 39.66 O
ATOM 5 O5' A B 964 62.629 70.608 117.445 1.00 38.85 O
ATOM 6 C5' A B 964 63.472 71.711 117.100 1.00 34.20 C
ATOM 7 C4' A B 964 64.241 71.391 115.852 1.00 35.62 C
ATOM 8 O4' A B 964 65.283 70.426 116.131 1.00 35.92 O
ATOM 9 C3' A B 964 63.421 70.748 114.750 1.00 35.67 C
ATOM 10 O3' A B 964 62.712 71.759 114.049 1.00 36.29 O
ATOM 11 C2' A B 964 64.493 70.060 113.910 1.00 35.93 C
ATOM 12 O2' A B 964 65.170 70.956 113.055 1.00 38.48 O
ATOM 13 C1' A B 964 65.480 69.606 114.991 1.00 35.83 C
ATOM 14 N9 A B 964 65.366 68.204 115.394 1.00 35.21 N
ATOM 15 C8 A B 964 64.527 67.643 116.326 1.00 35.65 C
ATOM 16 N7 A B 964 64.688 66.350 116.470 1.00 35.40 N
ATOM 17 C5 A B 964 65.695 66.038 115.571 1.00 36.18 C
ATOM 18 C6 A B 964 66.332 64.828 115.245 1.00 37.44 C
ATOM 19 N6 A B 964 66.042 63.659 115.818 1.00 36.74 N
ATOM 20 N1 A B 964 67.295 64.861 114.298 1.00 36.93 N
ATOM 21 C2 A B 964 67.593 66.032 113.728 1.00 36.27 C
ATOM 22 N3 A B 964 67.071 67.235 113.951 1.00 37.02 N
ATOM 23 C4 A B 964 66.116 67.169 114.896 1.00 36.05 C
ATOM 24 P A B 965 61.433 71.380 113.152 1.00 38.61 P
ATOM 25 OP1 A B 965 60.354 72.373 113.442 1.00 35.72 O
ATOM 26 OP2 A B 965 61.150 69.928 113.300 1.00 37.89 O
ATOM 27 O5' A B 965 61.958 71.629 111.667 1.00 38.93 O
TER
Atoms:
C2: (64.214,61.789,117.827)
OP1: (60.170,58.787,123.855)
OP2: (60.520,61.241,123.185)
C4: (63.305,63.743,118.699)
O5': (61.452,59.400,121.803)
C3': (63.873,58.401,120.500)
C1': (63.356,59.562,118.506)
O4': (62.149,59.051,119.044)
C5': (61.417,58.127,121.152)
P: (60.288,59.825,122.798)
O2: (65.002,61.199,117.082)
C4': (62.454,58.073,120.067)
C2': (64.514,58.817,119.181)
O2': (64.836,57.695,118.375)
N1: (63.349,61.038,118.634)
N3: (64.166,63.138,117.880)
N4: (63.268,65.081,118.692)
C6: (62.496,61.669,119.498)
C5: (62.438,63.005,119.559)
O3': (64.442,57.217,121.056)
OP1: (60.170,58.787,123.855)
OP2: (60.520,61.241,123.185)
C4: (63.305,63.743,118.699)
O5': (61.452,59.400,121.803)
C3': (63.873,58.401,120.500)
C1': (63.356,59.562,118.506)
O4': (62.149,59.051,119.044)
C5': (61.417,58.127,121.152)
P: (60.288,59.825,122.798)
O2: (65.002,61.199,117.082)
C4': (62.454,58.073,120.067)
C2': (64.514,58.817,119.181)
O2': (64.836,57.695,118.375)
N1: (63.349,61.038,118.634)
N3: (64.166,63.138,117.880)
N4: (63.268,65.081,118.692)
C6: (62.496,61.669,119.498)
C5: (62.438,63.005,119.559)
O3': (64.442,57.217,121.056)
OP1: (60.817,71.880,118.608)
OP2: (61.065,69.339,118.921)
C3': (63.421,70.748,114.750)
C1': (65.480,69.606,114.991)
C5': (63.472,71.711,117.100)
O4': (65.283,70.426,116.131)
C8: (64.527,67.643,116.326)
O2': (65.170,70.956,113.055)
C6: (66.332,64.828,115.245)
C5: (65.695,66.038,115.571)
C4: (66.116,67.169,114.896)
P: (61.682,70.681,118.721)
C4': (64.241,71.391,115.852)
C2': (64.493,70.060,113.910)
C2: (67.593,66.032,113.728)
N1: (67.295,64.861,114.298)
N3: (67.071,67.235,113.951)
N6: (66.042,63.659,115.818)
N7: (64.688,66.350,116.470)
N9: (65.366,68.204,115.394)
O5': (62.629,70.608,117.445)
O3': (62.712,71.759,114.049)
OP2: (61.065,69.339,118.921)
C3': (63.421,70.748,114.750)
C1': (65.480,69.606,114.991)
C5': (63.472,71.711,117.100)
O4': (65.283,70.426,116.131)
C8: (64.527,67.643,116.326)
O2': (65.170,70.956,113.055)
C6: (66.332,64.828,115.245)
C5: (65.695,66.038,115.571)
C4: (66.116,67.169,114.896)
P: (61.682,70.681,118.721)
C4': (64.241,71.391,115.852)
C2': (64.493,70.060,113.910)
C2: (67.593,66.032,113.728)
N1: (67.295,64.861,114.298)
N3: (67.071,67.235,113.951)
N6: (66.042,63.659,115.818)
N7: (64.688,66.350,116.470)
N9: (65.366,68.204,115.394)
O5': (62.629,70.608,117.445)
O3': (62.712,71.759,114.049)
Image (generated by PyMOL):