Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A1220:A1259
Extra
PDB:
ATOM 1 O3' A A1219 248.972 152.017 1.258 1.00125.20 O
ATOM 2 P C A1220 247.666 152.070 2.196 1.00105.64 P
ATOM 3 OP1 C A1220 247.541 153.434 2.752 1.00 68.61 O
ATOM 4 OP2 C A1220 247.644 150.890 3.118 1.00 68.61 O
ATOM 5 O5' C A1220 246.476 151.964 1.154 1.00105.64 O
ATOM 6 C5' C A1220 245.154 151.744 1.610 1.00105.64 C
ATOM 7 C4' C A1220 244.202 151.712 0.452 1.00105.64 C
ATOM 8 O4' C A1220 244.768 150.945 -0.643 1.00105.64 O
ATOM 9 C3' C A1220 242.924 150.996 0.821 1.00105.64 C
ATOM 10 O3' C A1220 242.037 151.858 1.495 1.00105.64 O
ATOM 11 C2' C A1220 242.467 150.427 -0.510 1.00105.64 C
ATOM 12 O2' C A1220 241.850 151.400 -1.326 1.00105.64 O
ATOM 13 C1' C A1220 243.811 150.007 -1.116 1.00105.64 C
ATOM 14 N1 C A1220 244.225 148.664 -0.639 1.00 68.61 N
ATOM 15 C2 C A1220 243.509 147.526 -1.063 1.00 68.61 C
ATOM 16 O2 C A1220 242.568 147.663 -1.882 1.00 68.61 O
ATOM 17 N3 C A1220 243.861 146.309 -0.574 1.00 68.61 N
ATOM 18 C4 C A1220 244.877 146.200 0.283 1.00 68.61 C
ATOM 19 N4 C A1220 245.175 144.991 0.751 1.00 68.61 N
ATOM 20 C5 C A1220 245.632 147.329 0.703 1.00 68.61 C
ATOM 21 C6 C A1220 245.279 148.526 0.224 1.00 68.61 C
ATOM 22 P A A1221 241.750 151.610 3.058 1.00116.09 P
ATOM 23 OP1 A A1221 241.182 152.882 3.569 1.00 55.65 O
ATOM 24 OP2 A A1221 242.975 151.038 3.691 1.00 55.65 O
ATOM 25 O5' A A1221 240.619 150.482 3.073 1.00116.09 O
TER
ATOM 1 O3' A B1258 246.569 140.772 4.033 1.00127.02 O
ATOM 2 P A B1259 247.684 140.678 2.878 1.00 81.21 P
ATOM 3 OP1 A B1259 248.815 139.920 3.483 1.00 67.08 O
ATOM 4 OP2 A B1259 247.920 142.026 2.286 1.00 67.08 O
ATOM 5 O5' A B1259 247.010 139.767 1.760 1.00 81.21 O
ATOM 6 C5' A B1259 246.778 138.360 1.987 1.00 81.21 C
ATOM 7 C4' A B1259 245.832 137.822 0.948 1.00 81.21 C
ATOM 8 O4' A B1259 244.534 138.438 1.129 1.00 81.21 O
ATOM 9 C3' A B1259 246.222 138.159 -0.480 1.00 81.21 C
ATOM 10 O3' A B1259 247.137 137.208 -1.001 1.00 81.21 O
ATOM 11 C2' A B1259 244.888 138.150 -1.208 1.00 81.21 C
ATOM 12 O2' A B1259 244.493 136.850 -1.585 1.00 81.21 O
ATOM 13 C1' A B1259 243.941 138.687 -0.131 1.00 81.21 C
ATOM 14 N9 A B1259 243.707 140.126 -0.254 1.00 67.08 N
ATOM 15 C8 A B1259 244.437 141.143 0.297 1.00 67.08 C
ATOM 16 N7 A B1259 244.009 142.336 -0.028 1.00 67.08 N
ATOM 17 C5 A B1259 242.914 142.091 -0.842 1.00 67.08 C
ATOM 18 C6 A B1259 242.024 142.949 -1.524 1.00 67.08 C
ATOM 19 N6 A B1259 242.101 144.280 -1.488 1.00 67.08 N
ATOM 20 N1 A B1259 241.042 142.385 -2.257 1.00 67.08 N
ATOM 21 C2 A B1259 240.966 141.050 -2.295 1.00 67.08 C
ATOM 22 N3 A B1259 241.740 140.139 -1.698 1.00 67.08 N
ATOM 23 C4 A B1259 242.708 140.733 -0.980 1.00 67.08 C
ATOM 24 P A B1260 248.204 137.661 -2.109 1.00 67.77 P
ATOM 25 OP1 A B1260 249.046 136.471 -2.395 1.00 78.41 O
ATOM 26 OP2 A B1260 248.842 138.929 -1.678 1.00 78.41 O
ATOM 27 O5' A B1260 247.315 137.989 -3.390 1.00 67.77 O
TER
ATOM 2 P C A1220 247.666 152.070 2.196 1.00105.64 P
ATOM 3 OP1 C A1220 247.541 153.434 2.752 1.00 68.61 O
ATOM 4 OP2 C A1220 247.644 150.890 3.118 1.00 68.61 O
ATOM 5 O5' C A1220 246.476 151.964 1.154 1.00105.64 O
ATOM 6 C5' C A1220 245.154 151.744 1.610 1.00105.64 C
ATOM 7 C4' C A1220 244.202 151.712 0.452 1.00105.64 C
ATOM 8 O4' C A1220 244.768 150.945 -0.643 1.00105.64 O
ATOM 9 C3' C A1220 242.924 150.996 0.821 1.00105.64 C
ATOM 10 O3' C A1220 242.037 151.858 1.495 1.00105.64 O
ATOM 11 C2' C A1220 242.467 150.427 -0.510 1.00105.64 C
ATOM 12 O2' C A1220 241.850 151.400 -1.326 1.00105.64 O
ATOM 13 C1' C A1220 243.811 150.007 -1.116 1.00105.64 C
ATOM 14 N1 C A1220 244.225 148.664 -0.639 1.00 68.61 N
ATOM 15 C2 C A1220 243.509 147.526 -1.063 1.00 68.61 C
ATOM 16 O2 C A1220 242.568 147.663 -1.882 1.00 68.61 O
ATOM 17 N3 C A1220 243.861 146.309 -0.574 1.00 68.61 N
ATOM 18 C4 C A1220 244.877 146.200 0.283 1.00 68.61 C
ATOM 19 N4 C A1220 245.175 144.991 0.751 1.00 68.61 N
ATOM 20 C5 C A1220 245.632 147.329 0.703 1.00 68.61 C
ATOM 21 C6 C A1220 245.279 148.526 0.224 1.00 68.61 C
ATOM 22 P A A1221 241.750 151.610 3.058 1.00116.09 P
ATOM 23 OP1 A A1221 241.182 152.882 3.569 1.00 55.65 O
ATOM 24 OP2 A A1221 242.975 151.038 3.691 1.00 55.65 O
ATOM 25 O5' A A1221 240.619 150.482 3.073 1.00116.09 O
TER
ATOM 1 O3' A B1258 246.569 140.772 4.033 1.00127.02 O
ATOM 2 P A B1259 247.684 140.678 2.878 1.00 81.21 P
ATOM 3 OP1 A B1259 248.815 139.920 3.483 1.00 67.08 O
ATOM 4 OP2 A B1259 247.920 142.026 2.286 1.00 67.08 O
ATOM 5 O5' A B1259 247.010 139.767 1.760 1.00 81.21 O
ATOM 6 C5' A B1259 246.778 138.360 1.987 1.00 81.21 C
ATOM 7 C4' A B1259 245.832 137.822 0.948 1.00 81.21 C
ATOM 8 O4' A B1259 244.534 138.438 1.129 1.00 81.21 O
ATOM 9 C3' A B1259 246.222 138.159 -0.480 1.00 81.21 C
ATOM 10 O3' A B1259 247.137 137.208 -1.001 1.00 81.21 O
ATOM 11 C2' A B1259 244.888 138.150 -1.208 1.00 81.21 C
ATOM 12 O2' A B1259 244.493 136.850 -1.585 1.00 81.21 O
ATOM 13 C1' A B1259 243.941 138.687 -0.131 1.00 81.21 C
ATOM 14 N9 A B1259 243.707 140.126 -0.254 1.00 67.08 N
ATOM 15 C8 A B1259 244.437 141.143 0.297 1.00 67.08 C
ATOM 16 N7 A B1259 244.009 142.336 -0.028 1.00 67.08 N
ATOM 17 C5 A B1259 242.914 142.091 -0.842 1.00 67.08 C
ATOM 18 C6 A B1259 242.024 142.949 -1.524 1.00 67.08 C
ATOM 19 N6 A B1259 242.101 144.280 -1.488 1.00 67.08 N
ATOM 20 N1 A B1259 241.042 142.385 -2.257 1.00 67.08 N
ATOM 21 C2 A B1259 240.966 141.050 -2.295 1.00 67.08 C
ATOM 22 N3 A B1259 241.740 140.139 -1.698 1.00 67.08 N
ATOM 23 C4 A B1259 242.708 140.733 -0.980 1.00 67.08 C
ATOM 24 P A B1260 248.204 137.661 -2.109 1.00 67.77 P
ATOM 25 OP1 A B1260 249.046 136.471 -2.395 1.00 78.41 O
ATOM 26 OP2 A B1260 248.842 138.929 -1.678 1.00 78.41 O
ATOM 27 O5' A B1260 247.315 137.989 -3.390 1.00 67.77 O
TER
Atoms:
C2: (243.509,147.526,-1.063)
OP1: (247.541,153.434,2.752)
OP2: (247.644,150.890,3.118)
C4: (244.877,146.200,0.283)
O5': (246.476,151.964,1.154)
C3': (242.924,150.996,0.821)
C1': (243.811,150.007,-1.116)
O4': (244.768,150.945,-0.643)
C5': (245.154,151.744,1.610)
P: (247.666,152.070,2.196)
O2: (242.568,147.663,-1.882)
C4': (244.202,151.712,0.452)
C2': (242.467,150.427,-0.510)
O2': (241.850,151.400,-1.326)
N1: (244.225,148.664,-0.639)
N3: (243.861,146.309,-0.574)
N4: (245.175,144.991,0.751)
C6: (245.279,148.526,0.224)
C5: (245.632,147.329,0.703)
O3': (242.037,151.858,1.495)
OP1: (247.541,153.434,2.752)
OP2: (247.644,150.890,3.118)
C4: (244.877,146.200,0.283)
O5': (246.476,151.964,1.154)
C3': (242.924,150.996,0.821)
C1': (243.811,150.007,-1.116)
O4': (244.768,150.945,-0.643)
C5': (245.154,151.744,1.610)
P: (247.666,152.070,2.196)
O2: (242.568,147.663,-1.882)
C4': (244.202,151.712,0.452)
C2': (242.467,150.427,-0.510)
O2': (241.850,151.400,-1.326)
N1: (244.225,148.664,-0.639)
N3: (243.861,146.309,-0.574)
N4: (245.175,144.991,0.751)
C6: (245.279,148.526,0.224)
C5: (245.632,147.329,0.703)
O3': (242.037,151.858,1.495)
OP1: (248.815,139.920,3.483)
OP2: (247.920,142.026,2.286)
C3': (246.222,138.159,-0.480)
C1': (243.941,138.687,-0.131)
C5': (246.778,138.360,1.987)
O4': (244.534,138.438,1.129)
C8: (244.437,141.143,0.297)
O2': (244.493,136.850,-1.585)
C6: (242.024,142.949,-1.524)
C5: (242.914,142.091,-0.842)
C4: (242.708,140.733,-0.980)
P: (247.684,140.678,2.878)
C4': (245.832,137.822,0.948)
C2': (244.888,138.150,-1.208)
C2: (240.966,141.050,-2.295)
N1: (241.042,142.385,-2.257)
N3: (241.740,140.139,-1.698)
N6: (242.101,144.280,-1.488)
N7: (244.009,142.336,-0.028)
N9: (243.707,140.126,-0.254)
O5': (247.010,139.767,1.760)
O3': (247.137,137.208,-1.001)
OP2: (247.920,142.026,2.286)
C3': (246.222,138.159,-0.480)
C1': (243.941,138.687,-0.131)
C5': (246.778,138.360,1.987)
O4': (244.534,138.438,1.129)
C8: (244.437,141.143,0.297)
O2': (244.493,136.850,-1.585)
C6: (242.024,142.949,-1.524)
C5: (242.914,142.091,-0.842)
C4: (242.708,140.733,-0.980)
P: (247.684,140.678,2.878)
C4': (245.832,137.822,0.948)
C2': (244.888,138.150,-1.208)
C2: (240.966,141.050,-2.295)
N1: (241.042,142.385,-2.257)
N3: (241.740,140.139,-1.698)
N6: (242.101,144.280,-1.488)
N7: (244.009,142.336,-0.028)
N9: (243.707,140.126,-0.254)
O5': (247.010,139.767,1.760)
O3': (247.137,137.208,-1.001)
Image (generated by PyMOL):