Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:B38:B63
Extra
PDB:
ATOM 1 O3' G A 37 3.100 -15.973 19.156 1.00 65.01 O
ATOM 2 P C A 38 2.896 -15.215 17.757 1.00 66.50 P
ATOM 3 OP1 C A 38 2.872 -13.765 18.056 1.00 67.31 O
ATOM 4 OP2 C A 38 1.751 -15.818 17.037 1.00 66.34 O
ATOM 5 O5' C A 38 4.228 -15.577 16.930 1.00 66.58 O
ATOM 6 C5' C A 38 5.240 -16.465 17.430 1.00 66.76 C
ATOM 7 C4' C A 38 5.501 -17.652 16.505 1.00 66.67 C
ATOM 8 O4' C A 38 4.469 -18.667 16.668 1.00 66.49 O
ATOM 9 C3' C A 38 5.557 -17.340 15.006 1.00 67.11 C
ATOM 10 O3' C A 38 6.717 -17.932 14.407 1.00 66.82 O
ATOM 11 C2' C A 38 4.270 -17.972 14.485 1.00 66.99 C
ATOM 12 O2' C A 38 4.326 -18.365 13.126 1.00 67.42 O
ATOM 13 C1' C A 38 4.187 -19.193 15.391 1.00 65.99 C
ATOM 14 N1 C A 38 2.855 -19.878 15.318 1.00 65.52 N
ATOM 15 C2 C A 38 2.799 -21.217 14.893 1.00 64.71 C
ATOM 16 O2 C A 38 3.848 -21.809 14.612 1.00 64.33 O
ATOM 17 N3 C A 38 1.588 -21.833 14.808 1.00 64.35 N
ATOM 18 C4 C A 38 0.471 -21.163 15.119 1.00 64.58 C
ATOM 19 N4 C A 38 -0.693 -21.811 15.016 1.00 64.01 N
ATOM 20 C5 C A 38 0.501 -19.799 15.548 1.00 65.23 C
ATOM 21 C6 C A 38 1.701 -19.202 15.629 1.00 65.67 C
ATOM 22 P A A 39 7.440 -17.265 13.137 1.00 66.79 P
ATOM 23 OP1 A A 39 8.828 -16.952 13.549 1.00 66.58 O
ATOM 24 OP2 A A 39 6.573 -16.201 12.575 1.00 66.70 O
ATOM 25 O5' A A 39 7.459 -18.474 12.094 1.00 65.48 O
TER
ATOM 1 O3' A B 62 -5.507 -22.641 11.949 1.00 59.95 O
ATOM 2 P A B 63 -5.645 -23.008 13.499 1.00 58.11 P
ATOM 3 OP1 A B 63 -7.093 -22.997 13.814 1.00 58.27 O
ATOM 4 OP2 A B 63 -4.729 -22.151 14.286 1.00 58.01 O
ATOM 5 O5' A B 63 -5.075 -24.504 13.537 1.00 56.54 O
ATOM 6 C5' A B 63 -5.863 -25.585 13.049 1.00 55.83 C
ATOM 7 C4' A B 63 -5.010 -26.805 12.754 1.00 55.16 C
ATOM 8 O4' A B 63 -3.871 -26.408 11.949 1.00 54.74 O
ATOM 9 C3' A B 63 -4.370 -27.491 13.955 1.00 54.84 C
ATOM 10 O3' A B 63 -5.275 -28.358 14.627 1.00 55.70 O
ATOM 11 C2' A B 63 -3.230 -28.250 13.278 1.00 53.89 C
ATOM 12 O2' A B 63 -3.642 -29.402 12.567 1.00 54.18 O
ATOM 13 C1' A B 63 -2.741 -27.191 12.297 1.00 53.41 C
ATOM 14 N9 A B 63 -1.699 -26.343 12.874 1.00 51.94 N
ATOM 15 C8 A B 63 -1.848 -25.109 13.442 1.00 51.93 C
ATOM 16 N7 A B 63 -0.728 -24.588 13.880 1.00 51.46 N
ATOM 17 C5 A B 63 0.220 -25.548 13.583 1.00 50.48 C
ATOM 18 C6 A B 63 1.613 -25.603 13.793 1.00 49.85 C
ATOM 19 N6 A B 63 2.305 -24.623 14.381 1.00 49.61 N
ATOM 20 N1 A B 63 2.266 -26.710 13.378 1.00 49.44 N
ATOM 21 C2 A B 63 1.570 -27.694 12.787 1.00 49.52 C
ATOM 22 N3 A B 63 0.262 -27.754 12.536 1.00 49.60 N
ATOM 23 C4 A B 63 -0.360 -26.640 12.962 1.00 50.58 C
ATOM 24 P A B 64 -5.558 -28.198 16.199 1.00 56.23 P
ATOM 25 OP1 A B 64 -6.983 -27.831 16.343 1.00 56.70 O
ATOM 26 OP2 A B 64 -4.525 -27.342 16.825 1.00 55.98 O
ATOM 27 O5' A B 64 -5.401 -29.709 16.698 1.00 56.34 O
TER
ATOM 2 P C A 38 2.896 -15.215 17.757 1.00 66.50 P
ATOM 3 OP1 C A 38 2.872 -13.765 18.056 1.00 67.31 O
ATOM 4 OP2 C A 38 1.751 -15.818 17.037 1.00 66.34 O
ATOM 5 O5' C A 38 4.228 -15.577 16.930 1.00 66.58 O
ATOM 6 C5' C A 38 5.240 -16.465 17.430 1.00 66.76 C
ATOM 7 C4' C A 38 5.501 -17.652 16.505 1.00 66.67 C
ATOM 8 O4' C A 38 4.469 -18.667 16.668 1.00 66.49 O
ATOM 9 C3' C A 38 5.557 -17.340 15.006 1.00 67.11 C
ATOM 10 O3' C A 38 6.717 -17.932 14.407 1.00 66.82 O
ATOM 11 C2' C A 38 4.270 -17.972 14.485 1.00 66.99 C
ATOM 12 O2' C A 38 4.326 -18.365 13.126 1.00 67.42 O
ATOM 13 C1' C A 38 4.187 -19.193 15.391 1.00 65.99 C
ATOM 14 N1 C A 38 2.855 -19.878 15.318 1.00 65.52 N
ATOM 15 C2 C A 38 2.799 -21.217 14.893 1.00 64.71 C
ATOM 16 O2 C A 38 3.848 -21.809 14.612 1.00 64.33 O
ATOM 17 N3 C A 38 1.588 -21.833 14.808 1.00 64.35 N
ATOM 18 C4 C A 38 0.471 -21.163 15.119 1.00 64.58 C
ATOM 19 N4 C A 38 -0.693 -21.811 15.016 1.00 64.01 N
ATOM 20 C5 C A 38 0.501 -19.799 15.548 1.00 65.23 C
ATOM 21 C6 C A 38 1.701 -19.202 15.629 1.00 65.67 C
ATOM 22 P A A 39 7.440 -17.265 13.137 1.00 66.79 P
ATOM 23 OP1 A A 39 8.828 -16.952 13.549 1.00 66.58 O
ATOM 24 OP2 A A 39 6.573 -16.201 12.575 1.00 66.70 O
ATOM 25 O5' A A 39 7.459 -18.474 12.094 1.00 65.48 O
TER
ATOM 1 O3' A B 62 -5.507 -22.641 11.949 1.00 59.95 O
ATOM 2 P A B 63 -5.645 -23.008 13.499 1.00 58.11 P
ATOM 3 OP1 A B 63 -7.093 -22.997 13.814 1.00 58.27 O
ATOM 4 OP2 A B 63 -4.729 -22.151 14.286 1.00 58.01 O
ATOM 5 O5' A B 63 -5.075 -24.504 13.537 1.00 56.54 O
ATOM 6 C5' A B 63 -5.863 -25.585 13.049 1.00 55.83 C
ATOM 7 C4' A B 63 -5.010 -26.805 12.754 1.00 55.16 C
ATOM 8 O4' A B 63 -3.871 -26.408 11.949 1.00 54.74 O
ATOM 9 C3' A B 63 -4.370 -27.491 13.955 1.00 54.84 C
ATOM 10 O3' A B 63 -5.275 -28.358 14.627 1.00 55.70 O
ATOM 11 C2' A B 63 -3.230 -28.250 13.278 1.00 53.89 C
ATOM 12 O2' A B 63 -3.642 -29.402 12.567 1.00 54.18 O
ATOM 13 C1' A B 63 -2.741 -27.191 12.297 1.00 53.41 C
ATOM 14 N9 A B 63 -1.699 -26.343 12.874 1.00 51.94 N
ATOM 15 C8 A B 63 -1.848 -25.109 13.442 1.00 51.93 C
ATOM 16 N7 A B 63 -0.728 -24.588 13.880 1.00 51.46 N
ATOM 17 C5 A B 63 0.220 -25.548 13.583 1.00 50.48 C
ATOM 18 C6 A B 63 1.613 -25.603 13.793 1.00 49.85 C
ATOM 19 N6 A B 63 2.305 -24.623 14.381 1.00 49.61 N
ATOM 20 N1 A B 63 2.266 -26.710 13.378 1.00 49.44 N
ATOM 21 C2 A B 63 1.570 -27.694 12.787 1.00 49.52 C
ATOM 22 N3 A B 63 0.262 -27.754 12.536 1.00 49.60 N
ATOM 23 C4 A B 63 -0.360 -26.640 12.962 1.00 50.58 C
ATOM 24 P A B 64 -5.558 -28.198 16.199 1.00 56.23 P
ATOM 25 OP1 A B 64 -6.983 -27.831 16.343 1.00 56.70 O
ATOM 26 OP2 A B 64 -4.525 -27.342 16.825 1.00 55.98 O
ATOM 27 O5' A B 64 -5.401 -29.709 16.698 1.00 56.34 O
TER
Atoms:
C2: (2.799,-21.217,14.893)
OP1: (2.872,-13.765,18.056)
OP2: (1.751,-15.818,17.037)
C4: (0.471,-21.163,15.119)
O5': (4.228,-15.577,16.930)
C3': (5.557,-17.340,15.006)
C1': (4.187,-19.193,15.391)
O4': (4.469,-18.667,16.668)
C5': (5.240,-16.465,17.430)
P: (2.896,-15.215,17.757)
O2: (3.848,-21.809,14.612)
C4': (5.501,-17.652,16.505)
C2': (4.270,-17.972,14.485)
O2': (4.326,-18.365,13.126)
N1: (2.855,-19.878,15.318)
N3: (1.588,-21.833,14.808)
N4: (-0.693,-21.811,15.016)
C6: (1.701,-19.202,15.629)
C5: (0.501,-19.799,15.548)
O3': (6.717,-17.932,14.407)
OP1: (2.872,-13.765,18.056)
OP2: (1.751,-15.818,17.037)
C4: (0.471,-21.163,15.119)
O5': (4.228,-15.577,16.930)
C3': (5.557,-17.340,15.006)
C1': (4.187,-19.193,15.391)
O4': (4.469,-18.667,16.668)
C5': (5.240,-16.465,17.430)
P: (2.896,-15.215,17.757)
O2: (3.848,-21.809,14.612)
C4': (5.501,-17.652,16.505)
C2': (4.270,-17.972,14.485)
O2': (4.326,-18.365,13.126)
N1: (2.855,-19.878,15.318)
N3: (1.588,-21.833,14.808)
N4: (-0.693,-21.811,15.016)
C6: (1.701,-19.202,15.629)
C5: (0.501,-19.799,15.548)
O3': (6.717,-17.932,14.407)
OP1: (-7.093,-22.997,13.814)
OP2: (-4.729,-22.151,14.286)
C3': (-4.370,-27.491,13.955)
C1': (-2.741,-27.191,12.297)
C5': (-5.863,-25.585,13.049)
O4': (-3.871,-26.408,11.949)
C8: (-1.848,-25.109,13.442)
O2': (-3.642,-29.402,12.567)
C6: (1.613,-25.603,13.793)
C5: (0.220,-25.548,13.583)
C4: (-0.360,-26.640,12.962)
P: (-5.645,-23.008,13.499)
C4': (-5.010,-26.805,12.754)
C2': (-3.230,-28.250,13.278)
C2: (1.570,-27.694,12.787)
N1: (2.266,-26.710,13.378)
N3: (0.262,-27.754,12.536)
N6: (2.305,-24.623,14.381)
N7: (-0.728,-24.588,13.880)
N9: (-1.699,-26.343,12.874)
O5': (-5.075,-24.504,13.537)
O3': (-5.275,-28.358,14.627)
OP2: (-4.729,-22.151,14.286)
C3': (-4.370,-27.491,13.955)
C1': (-2.741,-27.191,12.297)
C5': (-5.863,-25.585,13.049)
O4': (-3.871,-26.408,11.949)
C8: (-1.848,-25.109,13.442)
O2': (-3.642,-29.402,12.567)
C6: (1.613,-25.603,13.793)
C5: (0.220,-25.548,13.583)
C4: (-0.360,-26.640,12.962)
P: (-5.645,-23.008,13.499)
C4': (-5.010,-26.805,12.754)
C2': (-3.230,-28.250,13.278)
C2: (1.570,-27.694,12.787)
N1: (2.266,-26.710,13.378)
N3: (0.262,-27.754,12.536)
N6: (2.305,-24.623,14.381)
N7: (-0.728,-24.588,13.880)
N9: (-1.699,-26.343,12.874)
O5': (-5.075,-24.504,13.537)
O3': (-5.275,-28.358,14.627)
Image (generated by PyMOL):