Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OGE:A312:A319
Extra
PDB:
ATOM 1 O3' A A 311 38.271 -12.331 63.244 1.00 78.05 O
ATOM 2 P C A 312 37.415 -11.355 64.206 1.00 84.86 P
ATOM 3 OP1 C A 312 35.978 -11.640 63.937 1.00 65.28 O
ATOM 4 OP2 C A 312 37.918 -9.976 63.997 1.00 78.82 O
ATOM 5 O5' C A 312 37.817 -11.865 65.662 1.00 54.44 O
ATOM 6 C5' C A 312 37.629 -13.225 66.013 1.00 61.06 C
ATOM 7 C4' C A 312 38.467 -13.635 67.204 1.00 70.94 C
ATOM 8 O4' C A 312 39.873 -13.479 66.910 1.00 65.49 O
ATOM 9 C3' C A 312 38.280 -12.835 68.492 1.00 70.12 C
ATOM 10 O3' C A 312 37.107 -13.187 69.204 1.00 71.77 O
ATOM 11 C2' C A 312 39.552 -13.152 69.249 1.00 61.59 C
ATOM 12 O2' C A 312 39.472 -14.436 69.835 1.00 66.00 O
ATOM 13 C1' C A 312 40.570 -13.209 68.112 1.00 68.57 C
ATOM 14 N1 C A 312 41.276 -11.952 67.964 1.00 69.40 N
ATOM 15 C2 C A 312 42.307 -11.733 68.866 1.00 72.68 C
ATOM 16 O2 C A 312 42.537 -12.609 69.722 1.00 65.92 O
ATOM 17 N3 C A 312 43.002 -10.584 68.768 1.00 73.09 N
ATOM 18 C4 C A 312 42.671 -9.713 67.820 1.00 71.70 C
ATOM 19 N4 C A 312 43.381 -8.594 67.754 1.00 80.33 N
ATOM 20 C5 C A 312 41.611 -9.930 66.893 1.00 75.10 C
ATOM 21 C6 C A 312 40.928 -11.068 66.996 1.00 68.90 C
ATOM 22 P U A 313 36.044 -12.054 69.613 1.00 80.33 P
ATOM 23 OP1 U A 313 34.758 -12.744 69.857 1.00 81.23 O
ATOM 24 OP2 U A 313 36.098 -10.988 68.573 1.00 80.48 O
ATOM 25 O5' U A 313 36.645 -11.503 70.979 1.00 86.44 O
TER
ATOM 1 O3' C B 318 47.137 -6.569 63.639 1.00 65.09 O
ATOM 2 P A B 319 48.710 -6.282 63.726 1.00 79.47 P
ATOM 3 OP1 A B 319 48.994 -5.102 62.863 1.00 78.84 O
ATOM 4 OP2 A B 319 49.407 -7.563 63.445 1.00 65.26 O
ATOM 5 O5' A B 319 48.902 -5.891 65.257 1.00 90.36 O
ATOM 6 C5' A B 319 48.611 -4.572 65.711 1.00 87.43 C
ATOM 7 C4' A B 319 49.097 -4.341 67.119 1.00 81.96 C
ATOM 8 O4' A B 319 48.036 -4.674 68.049 1.00 72.40 O
ATOM 9 C3' A B 319 50.320 -5.154 67.542 1.00 76.20 C
ATOM 10 O3' A B 319 51.178 -4.334 68.339 1.00 84.52 O
ATOM 11 C2' A B 319 49.716 -6.266 68.406 1.00 77.05 C
ATOM 12 O2' A B 319 50.588 -6.778 69.396 1.00 86.16 O
ATOM 13 C1' A B 319 48.518 -5.559 69.028 1.00 68.28 C
ATOM 14 N9 A B 319 47.414 -6.436 69.413 1.00 66.84 N
ATOM 15 C8 A B 319 46.183 -6.519 68.815 1.00 68.81 C
ATOM 16 N7 A B 319 45.354 -7.351 69.400 1.00 63.21 N
ATOM 17 C5 A B 319 46.081 -7.838 70.460 1.00 67.21 C
ATOM 18 C6 A B 319 45.757 -8.759 71.470 1.00 73.57 C
ATOM 19 N6 A B 319 44.576 -9.374 71.554 1.00 76.32 N
ATOM 20 N1 A B 319 46.708 -9.027 72.405 1.00 75.81 N
ATOM 21 C2 A B 319 47.897 -8.396 72.308 1.00 76.96 C
ATOM 22 N3 A B 319 48.325 -7.509 71.401 1.00 75.02 N
ATOM 23 C4 A B 319 47.351 -7.269 70.495 1.00 72.78 C
ATOM 24 P C B 320 52.164 -3.266 67.642 1.00104.44 P
ATOM 25 OP1 C B 320 52.045 -1.998 68.404 1.00124.76 O
ATOM 26 OP2 C B 320 51.854 -3.255 66.188 1.00117.98 O
ATOM 27 O5' C B 320 53.593 -3.910 67.887 1.00 68.13 O
TER
ATOM 2 P C A 312 37.415 -11.355 64.206 1.00 84.86 P
ATOM 3 OP1 C A 312 35.978 -11.640 63.937 1.00 65.28 O
ATOM 4 OP2 C A 312 37.918 -9.976 63.997 1.00 78.82 O
ATOM 5 O5' C A 312 37.817 -11.865 65.662 1.00 54.44 O
ATOM 6 C5' C A 312 37.629 -13.225 66.013 1.00 61.06 C
ATOM 7 C4' C A 312 38.467 -13.635 67.204 1.00 70.94 C
ATOM 8 O4' C A 312 39.873 -13.479 66.910 1.00 65.49 O
ATOM 9 C3' C A 312 38.280 -12.835 68.492 1.00 70.12 C
ATOM 10 O3' C A 312 37.107 -13.187 69.204 1.00 71.77 O
ATOM 11 C2' C A 312 39.552 -13.152 69.249 1.00 61.59 C
ATOM 12 O2' C A 312 39.472 -14.436 69.835 1.00 66.00 O
ATOM 13 C1' C A 312 40.570 -13.209 68.112 1.00 68.57 C
ATOM 14 N1 C A 312 41.276 -11.952 67.964 1.00 69.40 N
ATOM 15 C2 C A 312 42.307 -11.733 68.866 1.00 72.68 C
ATOM 16 O2 C A 312 42.537 -12.609 69.722 1.00 65.92 O
ATOM 17 N3 C A 312 43.002 -10.584 68.768 1.00 73.09 N
ATOM 18 C4 C A 312 42.671 -9.713 67.820 1.00 71.70 C
ATOM 19 N4 C A 312 43.381 -8.594 67.754 1.00 80.33 N
ATOM 20 C5 C A 312 41.611 -9.930 66.893 1.00 75.10 C
ATOM 21 C6 C A 312 40.928 -11.068 66.996 1.00 68.90 C
ATOM 22 P U A 313 36.044 -12.054 69.613 1.00 80.33 P
ATOM 23 OP1 U A 313 34.758 -12.744 69.857 1.00 81.23 O
ATOM 24 OP2 U A 313 36.098 -10.988 68.573 1.00 80.48 O
ATOM 25 O5' U A 313 36.645 -11.503 70.979 1.00 86.44 O
TER
ATOM 1 O3' C B 318 47.137 -6.569 63.639 1.00 65.09 O
ATOM 2 P A B 319 48.710 -6.282 63.726 1.00 79.47 P
ATOM 3 OP1 A B 319 48.994 -5.102 62.863 1.00 78.84 O
ATOM 4 OP2 A B 319 49.407 -7.563 63.445 1.00 65.26 O
ATOM 5 O5' A B 319 48.902 -5.891 65.257 1.00 90.36 O
ATOM 6 C5' A B 319 48.611 -4.572 65.711 1.00 87.43 C
ATOM 7 C4' A B 319 49.097 -4.341 67.119 1.00 81.96 C
ATOM 8 O4' A B 319 48.036 -4.674 68.049 1.00 72.40 O
ATOM 9 C3' A B 319 50.320 -5.154 67.542 1.00 76.20 C
ATOM 10 O3' A B 319 51.178 -4.334 68.339 1.00 84.52 O
ATOM 11 C2' A B 319 49.716 -6.266 68.406 1.00 77.05 C
ATOM 12 O2' A B 319 50.588 -6.778 69.396 1.00 86.16 O
ATOM 13 C1' A B 319 48.518 -5.559 69.028 1.00 68.28 C
ATOM 14 N9 A B 319 47.414 -6.436 69.413 1.00 66.84 N
ATOM 15 C8 A B 319 46.183 -6.519 68.815 1.00 68.81 C
ATOM 16 N7 A B 319 45.354 -7.351 69.400 1.00 63.21 N
ATOM 17 C5 A B 319 46.081 -7.838 70.460 1.00 67.21 C
ATOM 18 C6 A B 319 45.757 -8.759 71.470 1.00 73.57 C
ATOM 19 N6 A B 319 44.576 -9.374 71.554 1.00 76.32 N
ATOM 20 N1 A B 319 46.708 -9.027 72.405 1.00 75.81 N
ATOM 21 C2 A B 319 47.897 -8.396 72.308 1.00 76.96 C
ATOM 22 N3 A B 319 48.325 -7.509 71.401 1.00 75.02 N
ATOM 23 C4 A B 319 47.351 -7.269 70.495 1.00 72.78 C
ATOM 24 P C B 320 52.164 -3.266 67.642 1.00104.44 P
ATOM 25 OP1 C B 320 52.045 -1.998 68.404 1.00124.76 O
ATOM 26 OP2 C B 320 51.854 -3.255 66.188 1.00117.98 O
ATOM 27 O5' C B 320 53.593 -3.910 67.887 1.00 68.13 O
TER
Atoms:
C2: (42.307,-11.733,68.866)
OP1: (35.978,-11.640,63.937)
OP2: (37.918,-9.976,63.997)
C4: (42.671,-9.713,67.820)
O5': (37.817,-11.865,65.662)
C3': (38.280,-12.835,68.492)
C1': (40.570,-13.209,68.112)
O4': (39.873,-13.479,66.910)
C5': (37.629,-13.225,66.013)
P: (37.415,-11.355,64.206)
O2: (42.537,-12.609,69.722)
C4': (38.467,-13.635,67.204)
C2': (39.552,-13.152,69.249)
O2': (39.472,-14.436,69.835)
N1: (41.276,-11.952,67.964)
N3: (43.002,-10.584,68.768)
N4: (43.381,-8.594,67.754)
C6: (40.928,-11.068,66.996)
C5: (41.611,-9.930,66.893)
O3': (37.107,-13.187,69.204)
OP1: (35.978,-11.640,63.937)
OP2: (37.918,-9.976,63.997)
C4: (42.671,-9.713,67.820)
O5': (37.817,-11.865,65.662)
C3': (38.280,-12.835,68.492)
C1': (40.570,-13.209,68.112)
O4': (39.873,-13.479,66.910)
C5': (37.629,-13.225,66.013)
P: (37.415,-11.355,64.206)
O2: (42.537,-12.609,69.722)
C4': (38.467,-13.635,67.204)
C2': (39.552,-13.152,69.249)
O2': (39.472,-14.436,69.835)
N1: (41.276,-11.952,67.964)
N3: (43.002,-10.584,68.768)
N4: (43.381,-8.594,67.754)
C6: (40.928,-11.068,66.996)
C5: (41.611,-9.930,66.893)
O3': (37.107,-13.187,69.204)
OP1: (48.994,-5.102,62.863)
OP2: (49.407,-7.563,63.445)
C3': (50.320,-5.154,67.542)
C1': (48.518,-5.559,69.028)
C5': (48.611,-4.572,65.711)
O4': (48.036,-4.674,68.049)
C8: (46.183,-6.519,68.815)
O2': (50.588,-6.778,69.396)
C6: (45.757,-8.759,71.470)
C5: (46.081,-7.838,70.460)
C4: (47.351,-7.269,70.495)
P: (48.710,-6.282,63.726)
C4': (49.097,-4.341,67.119)
C2': (49.716,-6.266,68.406)
C2: (47.897,-8.396,72.308)
N1: (46.708,-9.027,72.405)
N3: (48.325,-7.509,71.401)
N6: (44.576,-9.374,71.554)
N7: (45.354,-7.351,69.400)
N9: (47.414,-6.436,69.413)
O5': (48.902,-5.891,65.257)
O3': (51.178,-4.334,68.339)
OP2: (49.407,-7.563,63.445)
C3': (50.320,-5.154,67.542)
C1': (48.518,-5.559,69.028)
C5': (48.611,-4.572,65.711)
O4': (48.036,-4.674,68.049)
C8: (46.183,-6.519,68.815)
O2': (50.588,-6.778,69.396)
C6: (45.757,-8.759,71.470)
C5: (46.081,-7.838,70.460)
C4: (47.351,-7.269,70.495)
P: (48.710,-6.282,63.726)
C4': (49.097,-4.341,67.119)
C2': (49.716,-6.266,68.406)
C2: (47.897,-8.396,72.308)
N1: (46.708,-9.027,72.405)
N3: (48.325,-7.509,71.401)
N6: (44.576,-9.374,71.554)
N7: (45.354,-7.351,69.400)
N9: (47.414,-6.436,69.413)
O5': (48.902,-5.891,65.257)
O3': (51.178,-4.334,68.339)
Image (generated by PyMOL):