Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2557:A2600
Extra
PDB:
ATOM 1 O3' C A2556 55.478 163.361 134.457 1.00 46.45 O
ATOM 2 P C A2557 55.903 164.532 133.446 1.00 48.33 P
ATOM 3 OP1 C A2557 54.765 165.476 133.386 1.00 49.65 O
ATOM 4 OP2 C A2557 56.436 163.954 132.198 1.00 47.37 O
ATOM 5 O5' C A2557 57.123 165.240 134.174 1.00 49.31 O
ATOM 6 C5' C A2557 58.387 164.608 134.160 1.00 49.15 C
ATOM 7 C4' C A2557 59.413 165.435 134.867 1.00 49.10 C
ATOM 8 O4' C A2557 60.566 164.594 135.053 1.00 49.59 O
ATOM 9 C3' C A2557 59.963 166.624 134.106 1.00 49.85 C
ATOM 10 O3' C A2557 60.681 167.352 135.103 1.00 51.56 O
ATOM 11 C2' C A2557 60.895 165.921 133.121 1.00 49.97 C
ATOM 12 O2' C A2557 61.913 166.707 132.538 1.00 49.18 O
ATOM 13 C1' C A2557 61.491 164.831 134.013 1.00 50.53 C
ATOM 14 N1 C A2557 61.688 163.562 133.313 1.00 51.56 N
ATOM 15 C2 C A2557 62.948 162.973 133.333 1.00 51.05 C
ATOM 16 O2 C A2557 63.858 163.527 133.944 1.00 50.21 O
ATOM 17 N3 C A2557 63.142 161.813 132.694 1.00 52.64 N
ATOM 18 C4 C A2557 62.129 161.229 132.053 1.00 54.62 C
ATOM 19 N4 C A2557 62.361 160.067 131.439 1.00 56.03 N
ATOM 20 C5 C A2557 60.829 161.807 132.015 1.00 54.14 C
ATOM 21 C6 C A2557 60.654 162.963 132.654 1.00 53.04 C
ATOM 22 P A A2558 60.724 168.961 135.096 1.00 52.97 P
ATOM 23 OP1 A A2558 59.355 169.543 135.094 1.00 50.24 O
ATOM 24 OP2 A A2558 61.711 169.420 134.101 1.00 50.96 O
ATOM 25 O5' A A2558 61.359 169.277 136.515 1.00 52.46 O
TER
ATOM 1 O3' C B2599 64.315 157.391 126.872 1.00 46.10 O
ATOM 2 P A B2600 64.232 156.135 127.889 1.00 45.75 P
ATOM 3 OP1 A B2600 64.179 154.864 127.129 1.00 45.99 O
ATOM 4 OP2 A B2600 63.198 156.402 128.911 1.00 46.85 O
ATOM 5 O5' A B2600 65.652 156.160 128.591 1.00 45.90 O
ATOM 6 C5' A B2600 66.854 155.809 127.877 1.00 46.64 C
ATOM 7 C4' A B2600 68.021 155.892 128.826 1.00 47.68 C
ATOM 8 O4' A B2600 68.047 157.249 129.344 1.00 48.44 O
ATOM 9 C3' A B2600 67.896 155.000 130.063 1.00 47.80 C
ATOM 10 O3' A B2600 69.170 154.847 130.644 1.00 48.81 O
ATOM 11 C2' A B2600 67.134 155.902 131.016 1.00 47.73 C
ATOM 12 O2' A B2600 67.266 155.550 132.374 1.00 47.54 O
ATOM 13 C1' A B2600 67.841 157.220 130.738 1.00 48.70 C
ATOM 14 N9 A B2600 67.108 158.411 131.136 1.00 49.46 N
ATOM 15 C8 A B2600 65.772 158.696 131.008 1.00 49.70 C
ATOM 16 N7 A B2600 65.440 159.873 131.468 1.00 50.92 N
ATOM 17 C5 A B2600 66.643 160.401 131.922 1.00 51.14 C
ATOM 18 C6 A B2600 66.975 161.627 132.502 1.00 51.41 C
ATOM 19 N6 A B2600 66.099 162.617 132.679 1.00 51.21 N
ATOM 20 N1 A B2600 68.259 161.818 132.876 1.00 50.66 N
ATOM 21 C2 A B2600 69.147 160.849 132.643 1.00 50.28 C
ATOM 22 N3 A B2600 68.966 159.671 132.076 1.00 49.44 N
ATOM 23 C4 A B2600 67.674 159.505 131.736 1.00 49.85 C
ATOM 24 P C B2601 70.053 153.558 130.342 1.00 50.58 P
ATOM 25 OP1 C B2601 70.134 153.364 128.876 1.00 51.17 O
ATOM 26 OP2 C B2601 69.561 152.464 131.203 1.00 50.71 O
ATOM 27 O5' C B2601 71.495 154.037 130.813 1.00 51.09 O
TER
ATOM 2 P C A2557 55.903 164.532 133.446 1.00 48.33 P
ATOM 3 OP1 C A2557 54.765 165.476 133.386 1.00 49.65 O
ATOM 4 OP2 C A2557 56.436 163.954 132.198 1.00 47.37 O
ATOM 5 O5' C A2557 57.123 165.240 134.174 1.00 49.31 O
ATOM 6 C5' C A2557 58.387 164.608 134.160 1.00 49.15 C
ATOM 7 C4' C A2557 59.413 165.435 134.867 1.00 49.10 C
ATOM 8 O4' C A2557 60.566 164.594 135.053 1.00 49.59 O
ATOM 9 C3' C A2557 59.963 166.624 134.106 1.00 49.85 C
ATOM 10 O3' C A2557 60.681 167.352 135.103 1.00 51.56 O
ATOM 11 C2' C A2557 60.895 165.921 133.121 1.00 49.97 C
ATOM 12 O2' C A2557 61.913 166.707 132.538 1.00 49.18 O
ATOM 13 C1' C A2557 61.491 164.831 134.013 1.00 50.53 C
ATOM 14 N1 C A2557 61.688 163.562 133.313 1.00 51.56 N
ATOM 15 C2 C A2557 62.948 162.973 133.333 1.00 51.05 C
ATOM 16 O2 C A2557 63.858 163.527 133.944 1.00 50.21 O
ATOM 17 N3 C A2557 63.142 161.813 132.694 1.00 52.64 N
ATOM 18 C4 C A2557 62.129 161.229 132.053 1.00 54.62 C
ATOM 19 N4 C A2557 62.361 160.067 131.439 1.00 56.03 N
ATOM 20 C5 C A2557 60.829 161.807 132.015 1.00 54.14 C
ATOM 21 C6 C A2557 60.654 162.963 132.654 1.00 53.04 C
ATOM 22 P A A2558 60.724 168.961 135.096 1.00 52.97 P
ATOM 23 OP1 A A2558 59.355 169.543 135.094 1.00 50.24 O
ATOM 24 OP2 A A2558 61.711 169.420 134.101 1.00 50.96 O
ATOM 25 O5' A A2558 61.359 169.277 136.515 1.00 52.46 O
TER
ATOM 1 O3' C B2599 64.315 157.391 126.872 1.00 46.10 O
ATOM 2 P A B2600 64.232 156.135 127.889 1.00 45.75 P
ATOM 3 OP1 A B2600 64.179 154.864 127.129 1.00 45.99 O
ATOM 4 OP2 A B2600 63.198 156.402 128.911 1.00 46.85 O
ATOM 5 O5' A B2600 65.652 156.160 128.591 1.00 45.90 O
ATOM 6 C5' A B2600 66.854 155.809 127.877 1.00 46.64 C
ATOM 7 C4' A B2600 68.021 155.892 128.826 1.00 47.68 C
ATOM 8 O4' A B2600 68.047 157.249 129.344 1.00 48.44 O
ATOM 9 C3' A B2600 67.896 155.000 130.063 1.00 47.80 C
ATOM 10 O3' A B2600 69.170 154.847 130.644 1.00 48.81 O
ATOM 11 C2' A B2600 67.134 155.902 131.016 1.00 47.73 C
ATOM 12 O2' A B2600 67.266 155.550 132.374 1.00 47.54 O
ATOM 13 C1' A B2600 67.841 157.220 130.738 1.00 48.70 C
ATOM 14 N9 A B2600 67.108 158.411 131.136 1.00 49.46 N
ATOM 15 C8 A B2600 65.772 158.696 131.008 1.00 49.70 C
ATOM 16 N7 A B2600 65.440 159.873 131.468 1.00 50.92 N
ATOM 17 C5 A B2600 66.643 160.401 131.922 1.00 51.14 C
ATOM 18 C6 A B2600 66.975 161.627 132.502 1.00 51.41 C
ATOM 19 N6 A B2600 66.099 162.617 132.679 1.00 51.21 N
ATOM 20 N1 A B2600 68.259 161.818 132.876 1.00 50.66 N
ATOM 21 C2 A B2600 69.147 160.849 132.643 1.00 50.28 C
ATOM 22 N3 A B2600 68.966 159.671 132.076 1.00 49.44 N
ATOM 23 C4 A B2600 67.674 159.505 131.736 1.00 49.85 C
ATOM 24 P C B2601 70.053 153.558 130.342 1.00 50.58 P
ATOM 25 OP1 C B2601 70.134 153.364 128.876 1.00 51.17 O
ATOM 26 OP2 C B2601 69.561 152.464 131.203 1.00 50.71 O
ATOM 27 O5' C B2601 71.495 154.037 130.813 1.00 51.09 O
TER
Atoms:
C2: (62.948,162.973,133.333)
OP1: (54.765,165.476,133.386)
OP2: (56.436,163.954,132.198)
C4: (62.129,161.229,132.053)
O5': (57.123,165.240,134.174)
C3': (59.963,166.624,134.106)
C1': (61.491,164.831,134.013)
O4': (60.566,164.594,135.053)
C5': (58.387,164.608,134.160)
P: (55.903,164.532,133.446)
O2: (63.858,163.527,133.944)
C4': (59.413,165.435,134.867)
C2': (60.895,165.921,133.121)
O2': (61.913,166.707,132.538)
N1: (61.688,163.562,133.313)
N3: (63.142,161.813,132.694)
N4: (62.361,160.067,131.439)
C6: (60.654,162.963,132.654)
C5: (60.829,161.807,132.015)
O3': (60.681,167.352,135.103)
OP1: (54.765,165.476,133.386)
OP2: (56.436,163.954,132.198)
C4: (62.129,161.229,132.053)
O5': (57.123,165.240,134.174)
C3': (59.963,166.624,134.106)
C1': (61.491,164.831,134.013)
O4': (60.566,164.594,135.053)
C5': (58.387,164.608,134.160)
P: (55.903,164.532,133.446)
O2: (63.858,163.527,133.944)
C4': (59.413,165.435,134.867)
C2': (60.895,165.921,133.121)
O2': (61.913,166.707,132.538)
N1: (61.688,163.562,133.313)
N3: (63.142,161.813,132.694)
N4: (62.361,160.067,131.439)
C6: (60.654,162.963,132.654)
C5: (60.829,161.807,132.015)
O3': (60.681,167.352,135.103)
OP1: (64.179,154.864,127.129)
OP2: (63.198,156.402,128.911)
C3': (67.896,155.000,130.063)
C1': (67.841,157.220,130.738)
C5': (66.854,155.809,127.877)
O4': (68.047,157.249,129.344)
C8: (65.772,158.696,131.008)
O2': (67.266,155.550,132.374)
C6: (66.975,161.627,132.502)
C5: (66.643,160.401,131.922)
C4: (67.674,159.505,131.736)
P: (64.232,156.135,127.889)
C4': (68.021,155.892,128.826)
C2': (67.134,155.902,131.016)
C2: (69.147,160.849,132.643)
N1: (68.259,161.818,132.876)
N3: (68.966,159.671,132.076)
N6: (66.099,162.617,132.679)
N7: (65.440,159.873,131.468)
N9: (67.108,158.411,131.136)
O5': (65.652,156.160,128.591)
O3': (69.170,154.847,130.644)
OP2: (63.198,156.402,128.911)
C3': (67.896,155.000,130.063)
C1': (67.841,157.220,130.738)
C5': (66.854,155.809,127.877)
O4': (68.047,157.249,129.344)
C8: (65.772,158.696,131.008)
O2': (67.266,155.550,132.374)
C6: (66.975,161.627,132.502)
C5: (66.643,160.401,131.922)
C4: (67.674,159.505,131.736)
P: (64.232,156.135,127.889)
C4': (68.021,155.892,128.826)
C2': (67.134,155.902,131.016)
C2: (69.147,160.849,132.643)
N1: (68.259,161.818,132.876)
N3: (68.966,159.671,132.076)
N6: (66.099,162.617,132.679)
N7: (65.440,159.873,131.468)
N9: (67.108,158.411,131.136)
O5': (65.652,156.160,128.591)
O3': (69.170,154.847,130.644)
Image (generated by PyMOL):